CF835794
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835794 vs. ExPASy Swiss-Prot
Match: RS5_CLOP1 (30S ribosomal protein S5 OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=rpsE PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.061e-11 Identity = 42/105 (40.00%), Postives = 62/105 (59.05%), Query Frame = 3 Query: 312 LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVA 626 LK++V+ I V K + G+ RF A VVVGD +GHVG+G S E+ AIR I AK +++ V + +G TVP ++ GK G+ V ++PA G G++A Sbjct: 10 LKEKVVSISRVTKVVKGGRNFRFSALVVVGDENGHVGVGTGKSIEIPEAIRKGIEDAKKNLVEV------SIVGT--TVPHEIHGKFGTGDVLIMPATEGTGVIA 106
BLAST of CF835794 vs. ExPASy Swiss-Prot
Match: RS5_GRAFK (30S ribosomal protein S5 OS=Gramella forsetii (strain KT0803) GN=rpsE PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.927e-11 Identity = 44/110 (40.00%), Postives = 62/110 (56.36%), Query Frame = 3 Query: 303 GHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSV--IPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVA 626 G +LKD ++ + V K T+ G+ F A VVVGD +G VG G+ SKEVA AI A+ AK ++ IP+ +G T+P + GK G V ++PA G GI+A Sbjct: 15 GLELKDRLVGVQRVTKVTKGGRAFGFSAIVVVGDENGVVGQGLGKSKEVADAISKAVEDAKKNLVRIPLHKG----------TLPHEQKGKYGGARVMLLPAAAGTGIIA 114
BLAST of CF835794 vs. ExPASy Swiss-Prot
Match: RS5_ENTFA (30S ribosomal protein S5 OS=Enterococcus faecalis GN=rpsE PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.047e-11 Identity = 43/106 (40.57%), Postives = 60/106 (56.60%), Query Frame = 3 Query: 309 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVA 626 +L+D V+ I V K + G+R RF A VVVGD +GHVG G ++EV AIR AI AK +++ V +G T+P +V G G + M PA G+G+ A Sbjct: 10 ELEDRVVAINRVTKVVKGGRRLRFAALVVVGDKNGHVGFGTGKAQEVPEAIRKAIEDAKKNLVEV------PMVG--STIPHEVIGVFGGGRILMKPAVEGSGVAA 107 The following BLAST results are available for this feature:
BLAST of CF835794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835794 ID=CF835794; Name=CF835794; organism=Citrus sinensis; type=EST; length=632bpback to top |