CF835798

Overview
NameCF835798
Unique NameCF835798
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length823
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835798 vs. ExPASy Swiss-Prot
Match: KPYK_BACST (Pyruvate kinase OS=Bacillus stearothermophilus GN=pyk PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 4.939e-19
Identity = 63/177 (35.59%), Postives = 90/177 (50.85%), Query Frame = -3
Query:  291 DVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGSTAKLVAKYRPGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSARASDAETTEEALEFAIEXXXXXXXXXXGDSVV 821
            DVANA+ DGTD VMLSGETAAG YP  AV+TM QI +  E  L++ D+  +  + S   ++  +++  S   TA +     I+  T  G T ++VAKYRP  PI++V              SNEA +R   +  G+       +  A    TT+E L+ A++          GD VV
Sbjct:  298 DVANAIFDGTDAVMLSGETAAGQYPVEAVKTMHQIALRTEQALEHRDILSQRTKESQTTIT--DAIGQSVAHTALNLDVAAIVTPTVSGKTPQMVAKYRPKAPIIAVT-------------SNEAVSRRLALVWGVY------TKEAPHVNTTDEMLDVAVDAAVRSGLVKHGDLVV 453          
BLAST of CF835798 vs. ExPASy Swiss-Prot
Match: KPYK_CLOPE (Pyruvate kinase OS=Clostridium perfringens GN=pykF PE=3 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 8.424e-19
Identity = 44/107 (41.12%), Postives = 74/107 (69.16%), Query Frame = -3
Query:  501 DVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGSTAKLVAKYRPGMPILSV 821
            DV NA+ DGTD +MLSGE+A+G++P  A  TM++I  +AE+ LDY  + +R+   +P P +  ++++ SA +TA+      I+  T+ GSTAK+++KY+P  PI+++
Sbjct:  296 DVCNAIFDGTDAIMLSGESASGSFPIEAAMTMSRIAKKAEANLDYNYLLRRLKDPNPNPDAFADAISYSASKTASKFPTKAIVAATQTGSTAKILSKYKPSCPIIAI 402          
BLAST of CF835798 vs. ExPASy Swiss-Prot
Match: KPYK_CHLTR (Pyruvate kinase OS=Chlamydia trachomatis GN=pyk PE=3 SV=3)

HSP 1 Score: 92.0485 bits (227), Expect = 4.181e-18
Identity = 50/108 (46.30%), Postives = 70/108 (64.81%), Query Frame = -3
Query:  501 DVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSP-LESLASSAVRTANSARATLILVLTRGGSTAKLVAKYRPGMPILSV 821
            DVANA+ DGT  VMLSGETA GA+P  AV+TM  I  E E T DY   F+   ++S + +SP LE++  S ++ A  A A  I+V T+ G +   ++KYRP +PI++V
Sbjct:  296 DVANAIYDGTSAVMLSGETALGAHPVHAVKTMRSIIQETEKTFDYHAFFQLNDKNSALKVSPYLEAIGFSGIQIAEKASAKAIIVYTQTGGSPMFLSKYRPYLPIIAV 403          
BLAST of CF835798 vs. ExPASy Swiss-Prot
Match: KPYK_CHLMU (Pyruvate kinase OS=Chlamydia muridarum GN=pyk PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.181e-18
Identity = 49/108 (45.37%), Postives = 71/108 (65.74%), Query Frame = -3
Query:  501 DVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSP-LESLASSAVRTANSARATLILVLTRGGSTAKLVAKYRPGMPILSV 821
            DVANA+ DGT  VMLSGETA+G YP  AV+TM  I  E E + DY   F+   ++S + +SP LE++ +S ++ A  A A  I+V T+ G +   ++KYRP +PI++V
Sbjct:  296 DVANAIHDGTSAVMLSGETASGTYPIEAVKTMRSIIQETEKSFDYQAFFQLNDKNSALKVSPYLEAIGASGIQIAEKASAKAIIVYTQTGGSPMFLSKYRPYLPIIAV 403          
BLAST of CF835798 vs. ExPASy Swiss-Prot
Match: KPYK_STAES (Pyruvate kinase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pyk PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.132e-18
Identity = 68/195 (34.87%), Postives = 94/195 (48.21%), Query Frame = -3
Query:  252 DVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGSTAKLVAKYRPGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSARASDAETTEEALEFAIEXXXXXXXXXXGDSVVALHRV-----GTASVIKI 821
            DVANA+ DGTD VMLSGETAAG YPE AV+TM  I V AE+  DY  +     +   V  S + ++  S   TA +     I+  T  GSTA+ ++KYRP   I++V               +E  AR   I  G+ PV+  G       +TT+  L  A+           GD ++    V     GT +++KI
Sbjct:  296 DVANAIYDGTDAVMLSGETAAGQYPEEAVKTMRNIAVSAEAAQDYKKLLSD--RTKLVETSLVNAIGVSVAHTALNLNVKAIVAATESGSTARTISKYRPHSDIIAVT-------------PSEKTARQCAIVWGVNPVVKEG------RKTTDALLNNAVATAVETGRVSNGDLIIITAGVPTGEKGTTNMMKI 469          
BLAST of CF835798 vs. ExPASy Swiss-Prot
Match: KPYK_STAEQ (Pyruvate kinase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pyk PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.132e-18
Identity = 68/195 (34.87%), Postives = 94/195 (48.21%), Query Frame = -3
Query:  252 DVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGSTAKLVAKYRPGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSARASDAETTEEALEFAIEXXXXXXXXXXGDSVVALHRV-----GTASVIKI 821
            DVANA+ DGTD VMLSGETAAG YPE AV+TM  I V AE+  DY  +     +   V  S + ++  S   TA +     I+  T  GSTA+ ++KYRP   I++V               +E  AR   I  G+ PV+  G       +TT+  L  A+           GD ++    V     GT +++KI
Sbjct:  296 DVANAIYDGTDAVMLSGETAAGQYPEEAVKTMRNIAVSAEAAQDYKKLLSD--RTKLVETSLVNAIGVSVAHTALNLNVKAIVAATESGSTARTISKYRPHSDIIAVT-------------PSEKTARQCAIVWGVNPVVKEG------RKTTDALLNNAVATAVETGRVSNGDLIIITAGVPTGEKGTTNMMKI 469          
BLAST of CF835798 vs. ExPASy Swiss-Prot
Match: KPYK_STAAW (Pyruvate kinase OS=Staphylococcus aureus (strain MW2) GN=pyk PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.314e-18
Identity = 62/162 (38.27%), Postives = 82/162 (50.62%), Query Frame = -3
Query:  336 DVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGSTAKLVAKYRPGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSARASDAETTEEALEFAIE 821
            DVANA+ DGTD VMLSGETAAG YPE AV+TM  I V AE+  DY  +     +   V  S + ++  S   TA +     I+  T  GSTA+ ++KYRP   I++V               +E  AR   I  G+ PV+  G  R S       A+  A+E
Sbjct:  296 DVANAIYDGTDAVMLSGETAAGLYPEEAVKTMRNIAVSAEAAQDYKKLLSD--RTKLVETSLVNAIGISVAHTALNLNVKAIVAATESGSTARTISKYRPHSDIIAVT-------------PSEETARQCSIVWGVQPVVKKG--RKSTDALLNNAVATAVE 440          
BLAST of CF835798 vs. ExPASy Swiss-Prot
Match: KPYK_STAAS (Pyruvate kinase OS=Staphylococcus aureus (strain MSSA476) GN=pyk PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.314e-18
Identity = 62/162 (38.27%), Postives = 82/162 (50.62%), Query Frame = -3
Query:  336 DVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGSTAKLVAKYRPGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSARASDAETTEEALEFAIE 821
            DVANA+ DGTD VMLSGETAAG YPE AV+TM  I V AE+  DY  +     +   V  S + ++  S   TA +     I+  T  GSTA+ ++KYRP   I++V               +E  AR   I  G+ PV+  G  R S       A+  A+E
Sbjct:  296 DVANAIYDGTDAVMLSGETAAGLYPEEAVKTMRNIAVSAEAAQDYKKLLSD--RTKLVETSLVNAIGISVAHTALNLNVKAIVAATESGSTARTISKYRPHSDIIAVT-------------PSEETARQCSIVWGVQPVVKKG--RKSTDALLNNAVATAVE 440          
BLAST of CF835798 vs. ExPASy Swiss-Prot
Match: KPYK_STAAR (Pyruvate kinase OS=Staphylococcus aureus (strain MRSA252) GN=pyk PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.314e-18
Identity = 62/162 (38.27%), Postives = 82/162 (50.62%), Query Frame = -3
Query:  336 DVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGSTAKLVAKYRPGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSARASDAETTEEALEFAIE 821
            DVANA+ DGTD VMLSGETAAG YPE AV+TM  I V AE+  DY  +     +   V  S + ++  S   TA +     I+  T  GSTA+ ++KYRP   I++V               +E  AR   I  G+ PV+  G  R S       A+  A+E
Sbjct:  296 DVANAIYDGTDAVMLSGETAAGLYPEEAVKTMRNIAVSAEAAQDYKKLLSD--RTKLVETSLVNAIGISVAHTALNLNVKAIVAATESGSTARTISKYRPHSDIIAVT-------------PSEETARQCSIVWGVQPVVKKG--RKSTDALLNNAVATAVE 440          
BLAST of CF835798 vs. ExPASy Swiss-Prot
Match: KPYK_STAAN (Pyruvate kinase OS=Staphylococcus aureus (strain N315) GN=pyk PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.314e-18
Identity = 62/162 (38.27%), Postives = 82/162 (50.62%), Query Frame = -3
Query:  336 DVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGSTAKLVAKYRPGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSARASDAETTEEALEFAIE 821
            DVANA+ DGTD VMLSGETAAG YPE AV+TM  I V AE+  DY  +     +   V  S + ++  S   TA +     I+  T  GSTA+ ++KYRP   I++V               +E  AR   I  G+ PV+  G  R S       A+  A+E
Sbjct:  296 DVANAIYDGTDAVMLSGETAAGLYPEEAVKTMRNIAVSAEAAQDYKKLLSD--RTKLVETSLVNAIGISVAHTALNLNVKAIVAATESGSTARTISKYRPHSDIIAVT-------------PSEETARQCSIVWGVQPVVKKG--RKSTDALLNNAVATAVE 440          
The following BLAST results are available for this feature:
BLAST of CF835798 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
KPYK_BACST4.939e-1935.59Pyruvate kinase OS=Bacillus stearothermophilus GN=... [more]
KPYK_CLOPE8.424e-1941.12Pyruvate kinase OS=Clostridium perfringens GN=pykF... [more]
KPYK_CHLTR4.181e-1846.30Pyruvate kinase OS=Chlamydia trachomatis GN=pyk PE... [more]
KPYK_CHLMU4.181e-1845.37Pyruvate kinase OS=Chlamydia muridarum GN=pyk PE=3... [more]
KPYK_STAES7.132e-1834.87Pyruvate kinase OS=Staphylococcus epidermidis (str... [more]
KPYK_STAEQ7.132e-1834.87Pyruvate kinase OS=Staphylococcus epidermidis (str... [more]
KPYK_STAAW9.314e-1838.27Pyruvate kinase OS=Staphylococcus aureus (strain M... [more]
KPYK_STAAS9.314e-1838.27Pyruvate kinase OS=Staphylococcus aureus (strain M... [more]
KPYK_STAAR9.314e-1838.27Pyruvate kinase OS=Staphylococcus aureus (strain M... [more]
KPYK_STAAN9.314e-1838.27Pyruvate kinase OS=Staphylococcus aureus (strain N... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01O13_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01O13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835798 ID=CF835798; Name=CF835798; organism=Citrus sinensis; type=EST; length=823bp
TTTTTTTTTTTTTTTTTGGATCAAAATGGTAGCTTTATGTATCCCCTTAT
TCTCTGAACCCCGAGTTCAAGAAGTCTTGCCACAAAGTCATTAATCATGA
GTTTTTTTCTCCGGGGGAAAATATAAGAAGGAGAATGCTGACATATAACA
AAGCAGCATTTCCCCTTCCCGCCAAAATATAACAAAAGGATATAAAAGTG
AAAAGGAAACAAAAGCTCGGGATGATCCCACGATCATCACTTCACGTTCA
AGATCTTGATTACTGATGCAGTTCCAACGCGGTGAAGAGCCACGACTGAA
TCTCCTTTCTTGCAGAGTCCCTTTTTCTTGCCAAGTTCAATAGCAAACTC
TAGTGCTTCCTCTGTGGTCTCCGCATCCGAGGCCCTAGCAGATCCTGCAT
ATAAAACTGGAACCAACCCACGAAAGATTAGGCTATGCCTTGCGGGAGCT
TCATTGCTGCATGACCAATCAAAGTTATCAGTCTTGATCTCAGGGACAAC
CACTGATAGAATAGGCATGCCAGGCCTGTACTTAGCCACCAGTTTAGCAG
TACTCCCTCCCCTCGTTAGGACCAATATAAGAGTGGCTCTTGCAGAATTG
GCTGTTCTAACAGCAGAAGAAGCCAGACTCTCCAATGGGCTCATAGGCAC
GGGTGAGTGCTGCATAACCCTCTTAAAAACATCACCATAGTCAAGTGTGC
TTTCAGCTTCTACACATATTTGGGCCATGGTACGGACTGCAACCTCCGGA
TAAGCTCCAGCTGCAGTTTCACCACTTAACATCACACAGTCCGTGCCATC
AAGAACAGCATTGGCAACATCAG
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