CF835799

Overview
NameCF835799
Unique NameCF835799
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length620
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835799 vs. ExPASy Swiss-Prot
Match: KPYK1_YEAST (Pyruvate kinase 1 OS=Saccharomyces cerevisiae GN=PYK1 PE=1 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 8.637e-27
Identity = 72/189 (38.10%), Postives = 101/189 (53.44%), Query Frame = 2
Query:    2 SPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGSTAKLVAKYRPGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSARASDAETTEEALEFAIEXXXXXXXXXXXDSVVAL 568
            +PRPTRAE +DV NA+LDG DCVMLSGETA G YP  AV TMA+  V AE  + Y   +  +   +P P S  E++A+SAV      +A  I+VL+  G+T +LV+KYRP  PI+ V             C     AR S ++RG+ P ++     +   +  E  + F IE           D+ V++
Sbjct:  307 NPRPTRAEVSDVGNAILDGADCVMLSGETAKGNYPINAVTTMAETAVIAEQAIAYLPNYDDMRNCTPKPTSTTETVAASAVAAVFEQKAKAIIVLSTSGTTPRLVSKYRPNCPIILVT-----------RCPR--AARFSHLYRGVFPFVFEKEPVSDWTDDVEARINFGIEKAKEFGILKKGDTYVSI 482          
BLAST of CF835799 vs. ExPASy Swiss-Prot
Match: KPYM_HUMAN (Pyruvate kinase isozymes M1/M2 OS=Homo sapiens GN=PKM2 PE=1 SV=4)

HSP 1 Score: 119.783 bits (299), Expect = 1.128e-26
Identity = 71/188 (37.77%), Postives = 101/188 (53.72%), Query Frame = 2
Query:    5 PRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGSTAKLVAKYRPGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSARASDAETTEEALEFAIEXXXXXXXXXXXDSVVAL 568
            PRPTRAE +DVANAVLDG DC+MLSGETA G YP  AVR    I  EAE+ + +  +F+ + + +P+   P E+ A  AV  +    +  I+VLT+ G +A  VA+YRP  PI++V               N   AR + ++RG+ PVL     + + AE  +  + FA+            D V+ L
Sbjct:  338 PRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAIYHLQLFEELRRLAPITSDPTEATAVGAVEASFKCCSGAIIVLTKSGRSAHQVARYRPRAPIIAVT-------------RNPQTARQAHLYRGIFPVLCKDPVQEAWAEDVDLRVNFAMNVGKARGFFKKGDVVIVL 512          
BLAST of CF835799 vs. ExPASy Swiss-Prot
Match: KPYM_MOUSE (Pyruvate kinase isozymes M1/M2 OS=Mus musculus GN=Pkm2 PE=1 SV=4)

HSP 1 Score: 117.472 bits (293), Expect = 5.598e-26
Identity = 70/188 (37.23%), Postives = 101/188 (53.72%), Query Frame = 2
Query:    5 PRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGSTAKLVAKYRPGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSARASDAETTEEALEFAIEXXXXXXXXXXXDSVVAL 568
            PRPTRAE +DVANAVLDG DC+MLSGETA G YP  AVR    I  EAE+ + +  +F+ + + +P+   P E+ A  AV  +    +  I+VLT+ G +A  VA+YRP  PI++V               N   AR + ++RG+ PVL   +   + AE  +  +  A++           D V+ L
Sbjct:  338 PRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAIYHLQLFEELRRLAPITSDPTEAAAVGAVEASFKCCSGAIIVLTKSGRSAHQVARYRPRAPIIAVT-------------RNPQTARQAHLYRGIFPVLCKDAVLNAWAEDVDLRVNLAMDVGKARGFFKKGDVVIVL 512          
BLAST of CF835799 vs. ExPASy Swiss-Prot
Match: KPYK_LEIME (Pyruvate kinase OS=Leishmania mexicana GN=PYK PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 5.598e-26
Identity = 59/117 (50.43%), Postives = 81/117 (69.23%), Query Frame = 2
Query:    2 SPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGSTAKLVAKYRPGMPILSV 352
            +PRPTRAE +DVANAV +G DCVMLSGETA G YP   V+ MA+IC+EA+S L+    F  + +   +PMS  E++  SAV + +  +A  ++VL+  G+ A+LVAKYRP  PI+ V
Sbjct:  306 NPRPTRAEVSDVANAVFNGADCVMLSGETAKGKYPNEVVQYMARICLEAQSALNEYVFFNSIKKLQHIPMSADEAVCGSAVNSVSETKAKAMVVLSNTGAGARLVAKYRPNCPIVCV 422          
BLAST of CF835799 vs. ExPASy Swiss-Prot
Match: KPYK_DROME (Pyruvate kinase OS=Drosophila melanogaster GN=PyK PE=1 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 5.598e-26
Identity = 71/188 (37.77%), Postives = 104/188 (55.32%), Query Frame = 2
Query:    5 PRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGSTAKLVAKYRPGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSARASDAETTEEALEFAIEXXXXXXXXXXXDSVVAL 568
            PRPTRAE +DVANAVLDG DCVMLSGETA G YP   V TMA+ C EAE+ L + ++F  +++ +   +    + A +AV  A  A+A+ I+V+T  G +A  V+KYRP  PI++V                   AR + ++RGLVP++Y         +  +  ++F ++           DSVV +
Sbjct:  341 PRPTRAEISDVANAVLDGADCVMLSGETAKGEYPLECVLTMAKTCKEAEAALWHQNLFNDLVRGAGT-IDASHAAAIAAVEAATKAKASAIVVITTSGKSAFQVSKYRPRCPIIAVT-------------RFAQTARQAHLYRGLVPLIYKEPGLGDWLKDVDVRVQFGLQVGKKNGFIKTGDSVVVV 514          
BLAST of CF835799 vs. ExPASy Swiss-Prot
Match: KPYK_AGABI (Pyruvate kinase OS=Agaricus bisporus GN=pkiA PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.247e-25
Identity = 66/151 (43.71%), Postives = 89/151 (58.94%), Query Frame = 2
Query:    2 SPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGSTAKLVAKYRPGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLY 454
            +PRPTRAE +DVANAVLDG+DCVMLSGETA G+YP  +V  MA+ C+ AE+ + Y  ++  +      P    E++A +AV  A    A  +LVL+  G TA+LV+KYRP +PI++V               NE  AR   + RG  P  Y
Sbjct:  321 NPRPTRAEVSDVANAVLDGSDCVMLSGETAKGSYPVQSVLMMAETCLLAETAICYPPLYDDLRAVQARPTETAETVAIAAVAAAAEQDAKALLVLSTSGETARLVSKYRPKIPIITVT-------------RNEQTARQIHLHRGCYPFWY 458          
BLAST of CF835799 vs. ExPASy Swiss-Prot
Match: KPYK2_YEAST (Pyruvate kinase 2 OS=Saccharomyces cerevisiae GN=PYK2 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.247e-25
Identity = 70/189 (37.04%), Postives = 100/189 (52.91%), Query Frame = 2
Query:    2 SPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGSTAKLVAKYRPGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSARASDAETTEEALEFAIEXXXXXXXXXXXDSVVAL 568
            +PRPTRAE +DV NAVLDG DCVMLSGETA G YP  AV  MA   + AEST+ +  ++  +   +P P S  E++A++A           I+VL+  G+TA+L++KYRP  PI+ V               +   AR + ++RG+ P LY         E     L+F +E           D+VV++
Sbjct:  309 NPRPTRAEVSDVGNAVLDGADCVMLSGETAKGDYPVNAVNIMAATALIAESTIAHLALYDDLRDATPKPTSTTETVAAAATAAILEQDGKAIVVLSTTGNTARLLSKYRPSCPIILVT-------------RHARTARIAHLYRGVFPFLYEPKRLDDWGEDVHRRLKFGVEMARSFGMVDNGDTVVSI 484          
BLAST of CF835799 vs. ExPASy Swiss-Prot
Match: KPYR_CANFA (Pyruvate kinase isozyme R (Fragment) OS=Canis familiaris GN=PKLR PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.629e-25
Identity = 66/188 (35.11%), Postives = 103/188 (54.79%), Query Frame = 2
Query:    5 PRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGSTAKLVAKYRPGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSARASDAETTEEALEFAIEXXXXXXXXXXXDSVVAL 568
            PRPTRAE +DVANAVLDG DC+MLSGETA G +P  AV+   +I  EAE+ + +  +F+ + + +P+   P E  A + V  A    A  I+VLT+ G +A+L+++YRP   +++V               +   AR + + RG+ P+LY+    A  A+  +  ++F IE           D V+ +
Sbjct:  326 PRPTRAETSDVANAVLDGADCIMLSGETAKGKFPVEAVKMQHRIAREAEAAVYHRQLFEELRRAAPLSRDPTEVTAIATVEAAFKCCAAAIIVLTKTGRSAQLLSRYRPRAAVIAVT-------------RSAQAARQAHLCRGVFPLLYSEPPEAIWADDVDRRVQFGIESGKLRGFLRVGDLVIVV 500          
BLAST of CF835799 vs. ExPASy Swiss-Prot
Match: KPYM_RAT (Pyruvate kinase isozymes M1/M2 OS=Rattus norvegicus GN=Pkm2 PE=1 SV=3)

HSP 1 Score: 115.546 bits (288), Expect = 2.127e-25
Identity = 70/188 (37.23%), Postives = 99/188 (52.66%), Query Frame = 2
Query:    5 PRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGSTAKLVAKYRPGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSARASDAETTEEALEFAIEXXXXXXXXXXXDSVVAL 568
            PRPTRAE +DVANAVLDG DC+MLSGETA G YP  AVR    I  EAE+ + +  +F+ + + S     PLE++A  +V  +    A  ++VLT  G +A  VA+YRP  PI++V               N   AR + ++RG+ PVL   +   + AE  +  +  A+            D V+ L
Sbjct:  338 PRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAVFHRLLFEELARASSQSTDPLEAMAMGSVEASYKCLAAALIVLTESGRSAHQVARYRPRAPIIAVT-------------RNPQTARQAHLYRGIFPVLCKDAVLDAWAEDVDLRVNLAMNVGKARGFFKKGDVVIVL 512          
BLAST of CF835799 vs. ExPASy Swiss-Prot
Match: KPYK_BACSU (Pyruvate kinase OS=Bacillus subtilis GN=pyk PE=1 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 8.084e-25
Identity = 72/204 (35.29%), Postives = 111/204 (54.41%), Query Frame = 2
Query:    2 SPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGSTAKLVAKYRPGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSARASDAETTEEALEFAIEXXXXXXXXXXXD-SVVALHRVGTASVNQILNV 610
            +PRPTRAEA+DVANA+ DGTD +MLSGETAAG+YP  AV+TM  I   +E  L+Y ++  +  +   V M+  +++  S   TA +  A  I+  T  G TA+++AKYRP  PI++V V             N++ +R   +  G    ++A S +  +A +T+E LE A++           D  V+    VG +    ++ V
Sbjct:  287 NPRPTRAEASDVANAIFDGTDAIMLSGETAAGSYPVEAVQTMHNIASRSEEALNYKEILSK--RRDQVGMTITDAIGQSVAHTAINLNAAAIVTPTESGHTARMIAKYRPQAPIVAVTV-------------NDSISRKLALVSG----VFAESGQ--NASSTDEMLEDAVQKSLNSGIVKHGDLIVITAGTVGESGTTNLMKV 469          
The following BLAST results are available for this feature:
BLAST of CF835799 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
KPYK1_YEAST8.637e-2738.10Pyruvate kinase 1 OS=Saccharomyces cerevisiae GN=P... [more]
KPYM_HUMAN1.128e-2637.77Pyruvate kinase isozymes M1/M2 OS=Homo sapiens GN=... [more]
KPYM_MOUSE5.598e-2637.23Pyruvate kinase isozymes M1/M2 OS=Mus musculus GN=... [more]
KPYK_LEIME5.598e-2650.43Pyruvate kinase OS=Leishmania mexicana GN=PYK PE=1... [more]
KPYK_DROME5.598e-2637.77Pyruvate kinase OS=Drosophila melanogaster GN=PyK ... [more]
KPYK_AGABI1.247e-2543.71Pyruvate kinase OS=Agaricus bisporus GN=pkiA PE=2 ... [more]
KPYK2_YEAST1.247e-2537.04Pyruvate kinase 2 OS=Saccharomyces cerevisiae GN=P... [more]
KPYR_CANFA1.629e-2535.11Pyruvate kinase isozyme R (Fragment) OS=Canis fami... [more]
KPYM_RAT2.127e-2537.23Pyruvate kinase isozymes M1/M2 OS=Rattus norvegicu... [more]
KPYK_BACSU8.084e-2535.29Pyruvate kinase OS=Bacillus subtilis GN=pyk PE=1 S... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS03_01O13_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01O13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835799 ID=CF835799; Name=CF835799; organism=Citrus sinensis; type=EST; length=620bp
GTCTCCCCGCCCAACAAGAGCCGAGGCCACTGATGTTGCCAATGCTGTTC
TTGATGGCACGGACTGTGTGATGTTAAGTGGTGAAACTGCAGCTGGAGCT
TATCCGGAGGTTGCAGTCCGTACCATGGCCCAAATATGTGTAGAAGCTGA
AAGCACACTTGACTATGGTGATGTTTTTAAGAGGGTTATGCAGCACTCAC
CCGTGCCTATGAGCCCATTGGAGAGTCTGGCTTCTTCTGCTGTTAGAACA
GCCAATTCTGCAAGAGCCACTCTTATATTGGTCCTAACGAGGGGAGGGAG
TACTGCTAAACTGGTGGCTAAGTACAGGCCTGGCATGCCTATTCTATCAG
TGGTTGTCCCTGAGATCAAGACTGATAACTTTGATTGGTCATGCAGCAAT
GAAGCTCCCGCAAGGCATAGCCTAATCTTTCGTGGGTTGGTTCCAGTTTT
ATATGCAGGATCTGCTAGGGCCTCGGATGCGGAGACCACAGAGGAAGCAC
TAGAGTTTGCTATTGAACTTGGCAAGAAAAAGGGACTCTGCAAGAAAGGA
GATTCAGTCGTGGCTCTTCACCGCGTTGGAACTGCATCAGTAAATCAGAT
CTTGAACGTGAAGTGATGAT
back to top