CF835799

Overview
NameCF835799
Unique NameCF835799
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length620
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835799 vs. ExPASy Swiss-Prot
Match: KPYK_CLOPE (Pyruvate kinase OS=Clostridium perfringens GN=pykF PE=3 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 4.012e-24
Identity = 52/117 (44.44%), Postives = 84/117 (71.79%), Query Frame = 2
Query:    2 SPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGSTAKLVAKYRPGMPILSV 352
            +PRPTRAEA+DV NA+ DGTD +MLSGE+A+G++P  A  TM++I  +AE+ LDY  + +R+   +P P +  ++++ SA +TA+      I+  T+ GSTAK+++KY+P  PI+++
Sbjct:  286 NPRPTRAEASDVCNAIFDGTDAIMLSGESASGSFPIEAAMTMSRIAKKAEANLDYNYLLRRLKDPNPNPDAFADAISYSASKTASKFPTKAIVAATQTGSTAKILSKYKPSCPIIAI 402          
BLAST of CF835799 vs. ExPASy Swiss-Prot
Match: KPYR_RAT (Pyruvate kinase isozymes R/L OS=Rattus norvegicus GN=Pklr PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.167e-23
Identity = 65/187 (34.76%), Postives = 99/187 (52.94%), Query Frame = 2
Query:    8 RPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGSTAKLVAKYRPGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSARASDAETTEEALEFAIEXXXXXXXXXXXDSVVAL 568
            RPTRAE +DVANAVLDG DC+MLSGETA G++P  AV     I  EAE+ + +  +F+ + + +P+   P E  A  AV  +    A  I+VLT+ G +A+L+++YRP   +++V               +   AR   + RG+ P+LY     A  A+  +  ++F IE           D V+ +
Sbjct:  382 RPTRAETSDVANAVLDGADCIMLSGETAKGSFPVEAVMMQHAIAREAEAAVYHRQLFEELRRAAPLSRDPTEVTAIGAVEASFKCCAAAIIVLTKTGRSAQLLSQYRPRAAVIAVT-------------RSAQAARQVHLSRGVFPLLYREPPEAIWADDVDRRVQFGIESGKLRGFLRVGDLVIVV 555          
BLAST of CF835799 vs. ExPASy Swiss-Prot
Match: KPYK_BACLI (Pyruvate kinase OS=Bacillus licheniformis GN=pyk PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.686e-22
Identity = 73/205 (35.61%), Postives = 108/205 (52.68%), Query Frame = 2
Query:    2 SPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGSTAKLVAKYRPGMPILSVVVPEIKTDNFDWSCSNEAPARH-SLIFRGLVPVLYAGSARASDAETTEEALEFAIEXXXXXXXXXXXD-SVVALHRVGTASVNQILNV 610
            +PRPTRAEA+DVANA+ DGTD +MLSGETAAG YP  AV+TM  I   +E  L++  +     +   V MS  +++  S   TA +     I+  T  G TA++++KYRP  PI++V V             N+A +R  SL+F      ++A S +  +  +T+E LE A++           D  V+    VG A    ++ V
Sbjct:  287 NPRPTRAEASDVANAIFDGTDAIMLSGETAAGNYPVEAVQTMHNIASRSEEALNHKKILS--ARSKQVSMSITDAIGQSVAHTAINLDVNAIVTPTESGHTARMISKYRPQAPIVAVTV-------------NDAVSRKLSLVFG-----VFATSGQ--NHSSTDEMLEKAVQKSLDTGIVRHGDLIVITAGAVGEAGTTNLMKV 469          
BLAST of CF835799 vs. ExPASy Swiss-Prot
Match: KPYK_STAAW (Pyruvate kinase OS=Staphylococcus aureus (strain MW2) GN=pyk PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.755e-22
Identity = 69/172 (40.12%), Postives = 91/172 (52.91%), Query Frame = 2
Query:    2 SPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGSTAKLVAKYRPGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSARASDAETTEEALEFAIE 517
            +PR TRAEA+DVANA+ DGTD VMLSGETAAG YPE AV+TM  I V AE+  DY  +     +   V  S + ++  S   TA +     I+  T  GSTA+ ++KYRP   I++V               +E  AR   I  G+ PV+  G  R S       A+  A+E
Sbjct:  286 NPRATRAEASDVANAIYDGTDAVMLSGETAAGLYPEEAVKTMRNIAVSAEAAQDYKKLLSD--RTKLVETSLVNAIGISVAHTALNLNVKAIVAATESGSTARTISKYRPHSDIIAVT-------------PSEETARQCSIVWGVQPVVKKG--RKSTDALLNNAVATAVE 440          
BLAST of CF835799 vs. ExPASy Swiss-Prot
Match: KPYK_STAAS (Pyruvate kinase OS=Staphylococcus aureus (strain MSSA476) GN=pyk PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.755e-22
Identity = 69/172 (40.12%), Postives = 91/172 (52.91%), Query Frame = 2
Query:    2 SPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGSTAKLVAKYRPGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSARASDAETTEEALEFAIE 517
            +PR TRAEA+DVANA+ DGTD VMLSGETAAG YPE AV+TM  I V AE+  DY  +     +   V  S + ++  S   TA +     I+  T  GSTA+ ++KYRP   I++V               +E  AR   I  G+ PV+  G  R S       A+  A+E
Sbjct:  286 NPRATRAEASDVANAIYDGTDAVMLSGETAAGLYPEEAVKTMRNIAVSAEAAQDYKKLLSD--RTKLVETSLVNAIGISVAHTALNLNVKAIVAATESGSTARTISKYRPHSDIIAVT-------------PSEETARQCSIVWGVQPVVKKG--RKSTDALLNNAVATAVE 440          
BLAST of CF835799 vs. ExPASy Swiss-Prot
Match: KPYK_STAAR (Pyruvate kinase OS=Staphylococcus aureus (strain MRSA252) GN=pyk PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.755e-22
Identity = 69/172 (40.12%), Postives = 91/172 (52.91%), Query Frame = 2
Query:    2 SPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGSTAKLVAKYRPGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSARASDAETTEEALEFAIE 517
            +PR TRAEA+DVANA+ DGTD VMLSGETAAG YPE AV+TM  I V AE+  DY  +     +   V  S + ++  S   TA +     I+  T  GSTA+ ++KYRP   I++V               +E  AR   I  G+ PV+  G  R S       A+  A+E
Sbjct:  286 NPRATRAEASDVANAIYDGTDAVMLSGETAAGLYPEEAVKTMRNIAVSAEAAQDYKKLLSD--RTKLVETSLVNAIGISVAHTALNLNVKAIVAATESGSTARTISKYRPHSDIIAVT-------------PSEETARQCSIVWGVQPVVKKG--RKSTDALLNNAVATAVE 440          
BLAST of CF835799 vs. ExPASy Swiss-Prot
Match: KPYK_STAAN (Pyruvate kinase OS=Staphylococcus aureus (strain N315) GN=pyk PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.755e-22
Identity = 69/172 (40.12%), Postives = 91/172 (52.91%), Query Frame = 2
Query:    2 SPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGSTAKLVAKYRPGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSARASDAETTEEALEFAIE 517
            +PR TRAEA+DVANA+ DGTD VMLSGETAAG YPE AV+TM  I V AE+  DY  +     +   V  S + ++  S   TA +     I+  T  GSTA+ ++KYRP   I++V               +E  AR   I  G+ PV+  G  R S       A+  A+E
Sbjct:  286 NPRATRAEASDVANAIYDGTDAVMLSGETAAGLYPEEAVKTMRNIAVSAEAAQDYKKLLSD--RTKLVETSLVNAIGISVAHTALNLNVKAIVAATESGSTARTISKYRPHSDIIAVT-------------PSEETARQCSIVWGVQPVVKKG--RKSTDALLNNAVATAVE 440          
BLAST of CF835799 vs. ExPASy Swiss-Prot
Match: KPYK_STAAM (Pyruvate kinase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=pyk PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.755e-22
Identity = 69/172 (40.12%), Postives = 91/172 (52.91%), Query Frame = 2
Query:    2 SPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGSTAKLVAKYRPGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSARASDAETTEEALEFAIE 517
            +PR TRAEA+DVANA+ DGTD VMLSGETAAG YPE AV+TM  I V AE+  DY  +     +   V  S + ++  S   TA +     I+  T  GSTA+ ++KYRP   I++V               +E  AR   I  G+ PV+  G  R S       A+  A+E
Sbjct:  286 NPRATRAEASDVANAIYDGTDAVMLSGETAAGLYPEEAVKTMRNIAVSAEAAQDYKKLLSD--RTKLVETSLVNAIGISVAHTALNLNVKAIVAATESGSTARTISKYRPHSDIIAVT-------------PSEETARQCSIVWGVQPVVKKG--RKSTDALLNNAVATAVE 440          
BLAST of CF835799 vs. ExPASy Swiss-Prot
Match: KPYK_STAAC (Pyruvate kinase OS=Staphylococcus aureus (strain COL) GN=pyk PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.755e-22
Identity = 69/172 (40.12%), Postives = 91/172 (52.91%), Query Frame = 2
Query:    2 SPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGSTAKLVAKYRPGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSARASDAETTEEALEFAIE 517
            +PR TRAEA+DVANA+ DGTD VMLSGETAAG YPE AV+TM  I V AE+  DY  +     +   V  S + ++  S   TA +     I+  T  GSTA+ ++KYRP   I++V               +E  AR   I  G+ PV+  G  R S       A+  A+E
Sbjct:  286 NPRATRAEASDVANAIYDGTDAVMLSGETAAGLYPEEAVKTMRNIAVSAEAAQDYKKLLSD--RTKLVETSLVNAIGISVAHTALNLNVKAIVAATESGSTARTISKYRPHSDIIAVT-------------PSEETARQCSIVWGVQPVVKKG--RKSTDALLNNAVATAVE 440          
BLAST of CF835799 vs. ExPASy Swiss-Prot
Match: KPYK_STAAB (Pyruvate kinase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=pyk PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.755e-22
Identity = 69/172 (40.12%), Postives = 91/172 (52.91%), Query Frame = 2
Query:    2 SPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGSTAKLVAKYRPGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSARASDAETTEEALEFAIE 517
            +PR TRAEA+DVANA+ DGTD VMLSGETAAG YPE AV+TM  I V AE+  DY  +     +   V  S + ++  S   TA +     I+  T  GSTA+ ++KYRP   I++V               +E  AR   I  G+ PV+  G  R S       A+  A+E
Sbjct:  286 NPRATRAEASDVANAIYDGTDAVMLSGETAAGLYPEEAVKTMRNIAVSAEAAQDYKKLLSD--RTKLVETSLVNAIGISVAHTALNLNVKAIVAATESGSTARTISKYRPHSDIIAVT-------------PSEETARQCSIVWGVQPVVKKG--RKSTDALLNNAVATAVE 440          
The following BLAST results are available for this feature:
BLAST of CF835799 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
KPYK_CLOPE4.012e-2444.44Pyruvate kinase OS=Clostridium perfringens GN=pykF... [more]
KPYR_RAT1.167e-2334.76Pyruvate kinase isozymes R/L OS=Rattus norvegicus ... [more]
KPYK_BACLI1.686e-2235.61Pyruvate kinase OS=Bacillus licheniformis GN=pyk P... [more]
KPYK_STAAW3.755e-2240.12Pyruvate kinase OS=Staphylococcus aureus (strain M... [more]
KPYK_STAAS3.755e-2240.12Pyruvate kinase OS=Staphylococcus aureus (strain M... [more]
KPYK_STAAR3.755e-2240.12Pyruvate kinase OS=Staphylococcus aureus (strain M... [more]
KPYK_STAAN3.755e-2240.12Pyruvate kinase OS=Staphylococcus aureus (strain N... [more]
KPYK_STAAM3.755e-2240.12Pyruvate kinase OS=Staphylococcus aureus (strain M... [more]
KPYK_STAAC3.755e-2240.12Pyruvate kinase OS=Staphylococcus aureus (strain C... [more]
KPYK_STAAB3.755e-2240.12Pyruvate kinase OS=Staphylococcus aureus (strain b... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01O13_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01O13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835799 ID=CF835799; Name=CF835799; organism=Citrus sinensis; type=EST; length=620bp
GTCTCCCCGCCCAACAAGAGCCGAGGCCACTGATGTTGCCAATGCTGTTC
TTGATGGCACGGACTGTGTGATGTTAAGTGGTGAAACTGCAGCTGGAGCT
TATCCGGAGGTTGCAGTCCGTACCATGGCCCAAATATGTGTAGAAGCTGA
AAGCACACTTGACTATGGTGATGTTTTTAAGAGGGTTATGCAGCACTCAC
CCGTGCCTATGAGCCCATTGGAGAGTCTGGCTTCTTCTGCTGTTAGAACA
GCCAATTCTGCAAGAGCCACTCTTATATTGGTCCTAACGAGGGGAGGGAG
TACTGCTAAACTGGTGGCTAAGTACAGGCCTGGCATGCCTATTCTATCAG
TGGTTGTCCCTGAGATCAAGACTGATAACTTTGATTGGTCATGCAGCAAT
GAAGCTCCCGCAAGGCATAGCCTAATCTTTCGTGGGTTGGTTCCAGTTTT
ATATGCAGGATCTGCTAGGGCCTCGGATGCGGAGACCACAGAGGAAGCAC
TAGAGTTTGCTATTGAACTTGGCAAGAAAAAGGGACTCTGCAAGAAAGGA
GATTCAGTCGTGGCTCTTCACCGCGTTGGAACTGCATCAGTAAATCAGAT
CTTGAACGTGAAGTGATGAT
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