CF835799

Overview
NameCF835799
Unique NameCF835799
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length620
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835799 vs. ExPASy Swiss-Prot
Match: KPYK2_ECOLI (Pyruvate kinase II OS=Escherichia coli (strain K12) GN=pykA PE=1 SV=3)

HSP 1 Score: 88.1965 bits (217), Expect = 3.637e-17
Identity = 62/166 (37.35%), Postives = 87/166 (52.41%), Query Frame = 2
Query:    2 SPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRV-MQHSPVPMSPLESLASSAVRTANSAR-ATLILVLTRGGSTAKLVAKYRPGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLY----AGSARASDA 481
            +P PTRAE  DVANAVLDGTD VMLS ETAAG YP   V  MA++C+ AE          R+ +Q   V     E++A SA+  AN  +  T I+ +T  G TA + ++   G+PI ++               +E     + ++RG+ PV +     G A AS+A
Sbjct:  293 NPMPTRAEVMDVANAVLDGTDAVMLSAETAAGQYPSETVAAMARVCLGAEKIPSINVSKHRLDVQFDNVE----EAIAMSAMYAANHLKGVTAIITMTESGRTALMTSRISSGLPIFAM-------------SRHERTLNLTALYRGVTPVHFDSANDGVAAASEA 441          
BLAST of CF835799 vs. ExPASy Swiss-Prot
Match: KPYK2_SALTY (Pyruvate kinase II OS=Salmonella typhimurium GN=pykA PE=3 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 4.750e-17
Identity = 58/157 (36.94%), Postives = 83/157 (52.87%), Query Frame = 2
Query:    2 SPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRV-MQHSPVPMSPLESLASSAVRTANSAR-ATLILVLTRGGSTAKLVAKYRPGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSA 466
            +P PTRAE  DVANAVLDGTD VMLS ETAAG YP   V  MA++C+ AE          R+ +Q   V     E++A SA+  AN  +  T I+ +T  G TA + ++   G+PI ++               +E     + ++RG+ PV +  +A
Sbjct:  293 NPMPTRAEVMDVANAVLDGTDAVMLSAETAAGQYPSETVAAMARVCLGAEKIPSINVSKHRLDVQFDNVE----EAIAMSAMYAANHLKGVTAIITMTESGRTALMTSRISSGLPIFAM-------------SRHERTLNLTALYRGVTPVHFDSAA 432          
BLAST of CF835799 vs. ExPASy Swiss-Prot
Match: KPYK_HAEIN (Pyruvate kinase OS=Haemophilus influenzae GN=pykA PE=3 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.170e-15
Identity = 56/157 (35.67%), Postives = 81/157 (51.59%), Query Frame = 2
Query:    2 SPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSAR-ATLILVLTRGGSTAKLVAKYRPGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSAR 469
            +P PTRAE  DVANAVLDGTD VMLS ETAAG YP   V  MA +C+ AE  +   +V +  M      +   ES+A SA+  AN  +    I+ L+  G T  L+++   G+PI ++               N+       ++RG+ P+ +   +R
Sbjct:  293 NPMPTRAEVMDVANAVLDGTDAVMLSAETAAGQYPSETVAAMASVCLGAEK-MPSINVSRHRMDKEFETIE--ESVAMSAMYAANHMKGVAAIVTLSSTGRTPLLMSRISSGLPIFAL-------------SRNQETLNLCALYRGVTPIYHGEESR 433          
BLAST of CF835799 vs. ExPASy Swiss-Prot
Match: KPYK_BUCAP (Pyruvate kinase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=pykA PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.170e-15
Identity = 67/209 (32.06%), Postives = 103/209 (49.28%), Query Frame = 2
Query:    2 SPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARA-TLILVLTRGGSTAKLVAKYRPGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSARASDAETTEEALEFAIEXXXXXXXXXXXDSVVA-----LHRVGTASVNQILNV 610
            +P PTRAE  DVANAVLDG+D VMLS ETA+G YP   V +MA++C  AE          R+        S  E++A S++  AN  +  T I+ +T  G TA + ++   G+PI ++   + KT N             + ++RG++P+ +      SD +  E A E AI            D V+      + ++G  + ++IL V
Sbjct:  293 NPLPTRAEVMDVANAVLDGSDAVMLSAETASGKYPSETVISMAKVCKGAEKVPSINVSRHRLNVEF---QSIEEAIAMSSMYAANHLKGITAIITMTESGKTALMTSRITSGLPIFALSKHK-KTLNL------------TALYRGVIPIYF-----DSDKDGVEAANE-AIILLCKKKFLFNNDLVIVTQGDIMGKIGKTNTSRILRV 479          
BLAST of CF835799 vs. ExPASy Swiss-Prot
Match: KPYK_THEMA (Pyruvate kinase OS=Thermotoga maritima GN=pyk PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.528e-15
Identity = 47/124 (37.90%), Postives = 76/124 (61.29%), Query Frame = 2
Query:    2 SPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGSTAKLVAKYRPGMPILSVVVPEIKT 373
            +P PTRAE TD+ANA+ DG D ++L+ ETA G +P  A++ ++++  EAE  L+    F R +++    +S  E+++ +  + + S  A LI+  T  GSTA  V+KY    PI++ + PE KT
Sbjct:  284 NPFPTRAEVTDIANAIFDGADALLLTAETAVGKHPLEAIKVLSKVAKEAEKKLE----FFRTIEYDTSDIS--EAISHACWQLSESLNAKLIITPTISGSTAVRVSKYNVSQPIVA-LTPEEKT 400          
BLAST of CF835799 vs. ExPASy Swiss-Prot
Match: KPYK_BUCAI (Pyruvate kinase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=pykA PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.996e-15
Identity = 56/168 (33.33%), Postives = 88/168 (52.38%), Query Frame = 2
Query:    2 SPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARA-TLILVLTRGGSTAKLVAKYRPGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSARASDAETTEEAL 502
            +P PTRAE  DVANAVLDG+D VMLS ETA+G YP   V  MA+IC  AE          R+  H+       E++A SA+  AN  +  T I+ +T  G TA + ++   G+PI ++               N+     + ++RG+ P+ +  +++ ++ +   EA+
Sbjct:  293 NPLPTRAEVMDVANAVLDGSDAVMLSAETASGEYPAETVIKMAKICKGAEKVPSINVSRHRI--HAKFD-DIEEAIAMSAMYVANHLKGITAIITMTESGKTALMTSRITSGLPIFAL-------------SKNKETLNLASLYRGVTPIYF--NSKNNNFKAANEAI 442          
BLAST of CF835799 vs. ExPASy Swiss-Prot
Match: KPYK1_AGRVI (Pyruvate kinase OS=Agrobacterium vitis GN=ttuE PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.996e-15
Identity = 45/121 (37.19%), Postives = 71/121 (58.68%), Query Frame = 2
Query:    2 SPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGSTAKLVAKYRPGMPILSVVVPE 364
            SP PTRAEA+DVA A+ DG D VMLS E+A GA+P   V  M++I  + E    Y  + +       +  +P  ++A++A   A + +A +I+  T  G+TA  +++ RP +PIL++   E
Sbjct:  287 SPTPTRAEASDVAGAIYDGADAVMLSAESATGAFPVETVEIMSRIIEKTEKHKFYRPILEAT--EPQIAHTPPHAVATAAADVALALKAPVIVAFTVSGTTASRISRARPPLPILALTPSE 405          
BLAST of CF835799 vs. ExPASy Swiss-Prot
Match: KPYK_BUCBP (Pyruvate kinase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=pykA PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.584e-15
Identity = 51/161 (31.68%), Postives = 82/161 (50.93%), Query Frame = 2
Query:    2 SPRPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANS-ARATLILVLTRGGSTAKLVAKYRPGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSARASDA 481
            +P PTRAE  DVANAVLDG+D VMLS ETA+G YP   ++ M+++C+ AE          R+           E++A SA+  AN  +  T I+ +T  G T+ + ++   G+PI ++              S+    + + ++RG+ P+ +  S     A
Sbjct:  293 NPMPTRAEVMDVANAVLDGSDAVMLSAETASGKYPIETIKVMSKVCMGAEKMPSINVSQHRIHDKF---HDIEEAIAMSAMYAANHLSGITAIITMTESGKTSLMTSRITSGLPIFAL-------------SSHIQTLKLTALYRGVTPIFFNSSKEGVSA 437          
BLAST of CF835799 vs. ExPASy Swiss-Prot
Match: KPYK_MYCIT (Pyruvate kinase OS=Mycobacterium intracellulare GN=pyk PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.294e-14
Identity = 49/123 (39.84%), Postives = 69/123 (56.10%), Query Frame = 2
Query:    8 RPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGSTAKLVAKYRPGMPILSVVV-PEIKT 373
            RPTRAEA+DVANAVLDG D VMLSGET+ G YP  AVRTM++I    E            + H P     + S A+  +     A+A  ++  T+ G T K +A+    +P+L+    PE+++
Sbjct:  287 RPTRAEASDVANAVLDGADAVMLSGETSVGKYPMAAVRTMSRIICAVED----NSTAAPPLTHVPRTKRGVISYAARDIGERLDAKA--LVAFTQSGDTVKRLARLHTPLPLLAFTAWPEVRS 403          
BLAST of CF835799 vs. ExPASy Swiss-Prot
Match: KPYK_CORGL (Pyruvate kinase OS=Corynebacterium glutamicum GN=pyk PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.882e-14
Identity = 49/113 (43.36%), Postives = 64/113 (56.64%), Query Frame = 2
Query:    8 RPTRAEATDVANAVLDGTDCVMLSGETAAGAYPEVAVRTMAQICVEAESTLDYGDVFKRVMQHSPVPMSPLESLASSAVRTANSARATLILVLTRGGSTAKLVAKYRPGMPIL 346
            RPTRAEA+DVANAVLDG D VMLSGET+ G  P   VRTM++I   AE+         RV   + +P +    ++ SA   A    A  ++  T  G TAK VA+    +P+L
Sbjct:  287 RPTRAEASDVANAVLDGADAVMLSGETSVGKDPHNVVRTMSRIVRFAETD-------GRVPDLTHIPRTKRGVISYSARDIAERLNARALVAFTTSGDTAKRVARLHSHLPLL 392          
The following BLAST results are available for this feature:
BLAST of CF835799 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
KPYK2_ECOLI3.637e-1737.35Pyruvate kinase II OS=Escherichia coli (strain K12... [more]
KPYK2_SALTY4.750e-1736.94Pyruvate kinase II OS=Salmonella typhimurium GN=py... [more]
KPYK_HAEIN1.170e-1535.67Pyruvate kinase OS=Haemophilus influenzae GN=pykA ... [more]
KPYK_BUCAP1.170e-1532.06Pyruvate kinase OS=Buchnera aphidicola subsp. Schi... [more]
KPYK_THEMA1.528e-1537.90Pyruvate kinase OS=Thermotoga maritima GN=pyk PE=1... [more]
KPYK_BUCAI1.996e-1533.33Pyruvate kinase OS=Buchnera aphidicola subsp. Acyr... [more]
KPYK1_AGRVI1.996e-1537.19Pyruvate kinase OS=Agrobacterium vitis GN=ttuE PE=... [more]
KPYK_BUCBP7.584e-1531.68Pyruvate kinase OS=Buchnera aphidicola subsp. Baiz... [more]
KPYK_MYCIT1.294e-1439.84Pyruvate kinase OS=Mycobacterium intracellulare GN... [more]
KPYK_CORGL2.882e-1443.36Pyruvate kinase OS=Corynebacterium glutamicum GN=p... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01O13_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01O13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835799 ID=CF835799; Name=CF835799; organism=Citrus sinensis; type=EST; length=620bp
GTCTCCCCGCCCAACAAGAGCCGAGGCCACTGATGTTGCCAATGCTGTTC
TTGATGGCACGGACTGTGTGATGTTAAGTGGTGAAACTGCAGCTGGAGCT
TATCCGGAGGTTGCAGTCCGTACCATGGCCCAAATATGTGTAGAAGCTGA
AAGCACACTTGACTATGGTGATGTTTTTAAGAGGGTTATGCAGCACTCAC
CCGTGCCTATGAGCCCATTGGAGAGTCTGGCTTCTTCTGCTGTTAGAACA
GCCAATTCTGCAAGAGCCACTCTTATATTGGTCCTAACGAGGGGAGGGAG
TACTGCTAAACTGGTGGCTAAGTACAGGCCTGGCATGCCTATTCTATCAG
TGGTTGTCCCTGAGATCAAGACTGATAACTTTGATTGGTCATGCAGCAAT
GAAGCTCCCGCAAGGCATAGCCTAATCTTTCGTGGGTTGGTTCCAGTTTT
ATATGCAGGATCTGCTAGGGCCTCGGATGCGGAGACCACAGAGGAAGCAC
TAGAGTTTGCTATTGAACTTGGCAAGAAAAAGGGACTCTGCAAGAAAGGA
GATTCAGTCGTGGCTCTTCACCGCGTTGGAACTGCATCAGTAAATCAGAT
CTTGAACGTGAAGTGATGAT
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