CF835800

Overview
NameCF835800
Unique NameCF835800
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length798
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835800 vs. ExPASy Swiss-Prot
Match: PER23_ARATH (Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 4.510e-38
Identity = 92/216 (42.59%), Postives = 116/216 (53.70%), Query Frame = -2
Query:  156 CPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLT-VKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDILIENKGLFQSDAALLTNKGARNIVMELR---NQDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 791
            CP  VSCADI+ +A++  +S        W V  GRRD   +  A A+  LPSPF+  ++LK  F D GL    DLV LSGGHT G + C F + RLYNF G    DPSL+P Y   L+  C    + T     D  +   FD  YY  L+  KGL QSD  L +  GA  I +  +   N   FF  F  +M RMG +  LTGTQGEIR+ C V+N
Sbjct:  120 CPRTVSCADIITIASQ--ISVLLSGGPWWPVPLGRRDSVEAFFALANTALPSPFSTLTQLKTAFADVGLNRPSDLVALSGGHTFGKAQCQFVTPRLYNFNGTNRPDPSLNPTYLVELRRLCPQNGNGTVLVNFDSVTPTTFDRQYYTNLLNGKGLIQSDQVLFSTPGADTIPLVNQYSSNTFVFFGAFVDAMIRMGNLKPLTGTQGEIRQNCRVVN 333          
BLAST of CF835800 vs. ExPASy Swiss-Prot
Match: PER72_ARATH (Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 7.693e-38
Identity = 93/215 (43.26%), Postives = 124/215 (57.67%), Query Frame = -2
Query:  153 CPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDILIENKGLFQSDAALLT-NKGARNIV-MELRNQDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVINN 791
            CP  VSCADI+ALA RDS          WEV  GRRD   +  + ++  +P+P   F  +   F  +GL + DLV LSG HTIG S CT F  RLYN +GNG  D +L   YA  L+ +C       T   LD  +  KFD+HY+  LI  KGL  SD  L T NK ++ +V +   NQ+ FF +FA+SM +MG ++ LTG +GEIR+ C  +N+
Sbjct:  122 CPETVSCADILALAARDSTVITGGPS--WEVPLGRRDARGASLSGSNNDIPAPNNTFQTILTKFKRQGLDLVDLVSLSGSHTIGNSRCTSFRQRLYNQSGNGKPDMTLSQYYATLLRQRCPRSGGDQTLFFLDFATPFKFDNHYFKNLIMYKGLLSSDEILFTKNKQSKELVELYAENQEAFFEQFAKSMVKMGNISPLTGAKGEIRRICRRVNH 334          
BLAST of CF835800 vs. ExPASy Swiss-Prot
Match: PER53_ARATH (Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 7.693e-38
Identity = 88/215 (40.93%), Postives = 120/215 (55.81%), Query Frame = -2
Query:  156 CPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDILIENKGLFQSDAALLTNKGARNIVME---LRNQDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 791
            CPG+VSC+D++ALA+  SVS        W VL GRRD   +  A A+  +PSP  + S +   F+  GL   DLV LSG HT G + C  F+NRL+NF+G G+ DP+L+    + L+  C      +T   LD  +   FD++Y+  L  N GL QSD  L +  G+  I +      NQ  FF  FAQSM  MG ++ LTG+ GEIR  C  +N
Sbjct:  121 CPGVVSCSDVLALASEASVSLAGGPS--WTVLLGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGRARCGVFNNRLFNFSGTGNPDPTLNSTLLSTLQQLCPQNGSASTITNLDLSTPDAFDNNYFANLQSNDGLLQSDQELFSTTGSSTIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEIRLDCKKVN 333          
BLAST of CF835800 vs. ExPASy Swiss-Prot
Match: PERA2_ARMRU (Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.714e-37
Identity = 88/215 (40.93%), Postives = 118/215 (54.88%), Query Frame = -2
Query:  156 CPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDILIENKGLFQSDAALLTNKGARNIVME---LRNQDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 791
            CPG+VSC+DI+ALA+  SVS        W VL GRRD   +  A A+  +PSPF   S +   F+  GL   DLV LSG HT G + C  F+NRL+NF+G    DP+L+    + L+  C      +T   LD  +   FD++Y+  L  N GL QSD  L +  G+  I +      NQ  FF  FAQSM  MG ++ LTG+ GEIR  C  ++
Sbjct:   91 CPGVVSCSDILALASEASVSLTGGPS--WTVLLGRRDSLTANLAGANSAIPSPFEGLSNITSKFSAVGLNTNDLVALSGAHTFGRARCGVFNNRLFNFSGTNGPDPTLNSTLLSSLQQLCPQNGSASTITNLDLSTPDAFDNNYFANLQSNNGLLQSDQELFSTLGSATIAVVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEIRLDCKKVD 303          
BLAST of CF835800 vs. ExPASy Swiss-Prot
Match: PERN1_TOBAC (Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.238e-37
Identity = 92/217 (42.40%), Postives = 118/217 (54.38%), Query Frame = -2
Query:  156 CPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDILIENKGLFQSDAALLTNKGARNIVMELRNQD-----KFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 791
            CPG+VSCADI+ALA RDSV     +   W V TGRRDG VS AA+A  L P+ F +    K+ F  KGL  +DLV L+G HTIG + C    +RL+NF   G  DPS+D  +   L+  C    D +    LD GS   FD+ Y+  L   +G+ +SD  L T+   +  V             F  EF +SM +M  + V TGT GEIRK CS IN
Sbjct:  117 CPGVVSCADILALAARDSVVAT--RGLTWSVPTGRRDGRVSRAADAGDL-PAFFDSVDIQKRKFLTKGLNTQDLVALTGAHTIGTAGCAVIRDRLFNFNSTGGPDPSIDATFLPQLRALCPQNGDASRRVGLDTGSVNNFDTSYFSNLRNGRGVLESDQKLWTDASTQVFVQRFLGIRGLLGLTFGVEFGRSMVKMSNIEVKTGTNGEIRKVCSAIN 330          
BLAST of CF835800 vs. ExPASy Swiss-Prot
Match: PER55_ARATH (Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.923e-37
Identity = 90/215 (41.86%), Postives = 127/215 (59.07%), Query Frame = -2
Query:  156 SRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDILIENKGLFQSDAALLTNKGAR-NIVMELRNQDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 797
            S+CPG+VSCADI+ALA RD V      P+ ++V  GRRDG VS A+     LP P  +   L + F   GL++ D++ LSG HTIG SHC  F+NRL+NF+     DP++DP YA  L   C S  +     ++D  S   FD+ YY  L+  KGLF SD AL  +  ++  +V    N ++F++ F+ +M+ +G + V  G QGEIR+ CS  N
Sbjct:  119 SQCPGVVSCADILALAARDVVVL-VGGPE-FKVELGRRDGLVSKASRVTGKLPEPGLDVRGLVQIFASNGLSLTDMIALSGAHTIGSSHCNRFANRLHNFSTFMPVDPTMDPVYAQQLIQAC-SDPNPDAVVDIDLTSRDTFDNSYYQNLVARKGLFTSDQALFNDLSSQATVVRFANNAEEFYSAFSSAMRNLGRVGVKVGNQGEIRRDCSAFN 330          
BLAST of CF835800 vs. ExPASy Swiss-Prot
Match: PER18_ARATH (Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.923e-37
Identity = 95/216 (43.98%), Postives = 127/216 (58.80%), Query Frame = -2
Query:  156 CPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRL-YNFTGNGDQ-DPSLDPRYAAFLKTKCKSLAD-TTTTAELDPGSFRKFDSHYYDILIENKGLFQSDAALLTNKGARNIVMELRN-QDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 791
            CPG VSCADI+ LA RD+V  +     +  + TGRRDG VS+AA     +        ++   F+ KGL+V DLVVLSG HTIG +HC  F++R   +  GN +  D SLD  YA  L  KC S  D TTT  + DP +   FD+ YY  L+ +KGLFQ+D+AL+ +   R IV  L N Q+ FF  + +S  +M  M V  G +GEIR+ CS +N
Sbjct:  116 CPGTVSCADILVLAARDAV--EALGGPVVPIPTGRRDGRVSMAANVRPNIIDTDFTVDKMINIFSSKGLSVHDLVVLSGAHTIGAAHCNTFNSRFKLDPKGNLELIDASLDNSYAQTLVNKCSSSLDPTTTVVDNDPETSSTFDNQYYKNLLAHKGLFQTDSALMEDDRTRKIVEILANDQESFFDRWTESFLKMSLMGVRVGEEGEIRRSCSAVN 329          
BLAST of CF835800 vs. ExPASy Swiss-Prot
Match: PERE5_ARMRU (Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.986e-37
Identity = 92/217 (42.40%), Postives = 117/217 (53.92%), Query Frame = -2
Query:  153 CPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLT-VKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDILIENKGLFQSDAALLTNKGARNIV---MELRNQDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVINN 791
            CP  VSCADI+ +A++  +S        W V  GRRD   +    A+  LPSPF   ++LKK F D GL    DLV LSGGHT G + C F + RLYNF G    DP+L+P Y A L+  C    + T     D  +   FD+ +Y  L   KGL QSD  L +  GA  I    +   N   FF  FA +M RMG +  LTGTQGEIR+ C V+N+
Sbjct:   91 CPRTVSCADILTIASQ--ISVLLSGGPSWAVPLGRRDSVEAFFDLANTALPSPFFTLAQLKKAFADVGLNRPSDLVALSGGHTFGRARCLFVTARLYNFNGTNRPDPTLNPSYLADLRRLCPRNGNGTVLVNFDVMTPNTFDNQFYTNLRNGKGLIQSDQELFSTPGADTIPLVNLYSSNTLSFFGAFADAMIRMGNLRPLTGTQGEIRQNCRVVNS 305          
BLAST of CF835800 vs. ExPASy Swiss-Prot
Match: PER3_ARMRU (Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.986e-37
Identity = 91/217 (41.94%), Postives = 114/217 (52.53%), Query Frame = -2
Query:  153 CPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLT-VKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDILIENKGLFQSDAALLTNKGARNIV---MELRNQDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVINN 791
            CP  VSCAD++ +A++  +S        W V  GRRD   +    A+  LPSPF   ++LKK F D GL    DLV LSGGHT G + C F + RLYNF G    DP+LDP Y   L+  C    + T     D  +   FD  YY  L   KGL QSD  L +  GA  I    +   N   FF  F  +M RMG +  LTGTQGEIR+ C V+N+
Sbjct:  120 CPRTVSCADVLTIASQ--ISVLLSGGPWWPVPLGRRDSVEAFFDLANTALPSPFFTLAQLKKAFADVGLNRPSDLVALSGGHTFGRAQCQFVTPRLYNFNGTNRPDPTLDPTYLVQLRALCPQNGNGTVLVNFDVVTPNTFDRQYYTNLRNGKGLIQSDQELFSTPGADTIPLVNLYSSNTFAFFGAFVDAMIRMGNLRPLTGTQGEIRQNCRVVNS 334          
BLAST of CF835800 vs. ExPASy Swiss-Prot
Match: PER37_ARATH (Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 6.512e-37
Identity = 89/223 (39.91%), Postives = 125/223 (56.05%), Query Frame = -2
Query:  138 CPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLT-VKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDILIENKGLFQSDAALLTNKGARNIVMELR----NQDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVINNPDSLL 791
            CP  VSCAD++A+A ++SV         W V  GRRD        A+  LP+PF   ++LK  F + GL    DLV LSGGHT G + C F  +RLYNF+  G  DP+LD  Y + L+ +C    + +   + D  +   FD+ YY  L ENKGL QSD  L ++  A + +  +R     Q KFF  FA++M RM +++ LTG QGEIR  C V+N+   ++
Sbjct:  113 CPKTVSCADLLAIAAQESVVLAGGPS--WRVPNGRRDSLRGFMDLANDNLPAPFFTLNQLKDRFKNVGLDRASDLVALSGGHTFGKNQCQFIMDRLYNFSNTGLPDPTLDKSYLSTLRKQCPRNGNQSVLVDFDLRTPTLFDNKYYVNLKENKGLIQSDQELFSSPDASDTLPLVREYADGQGKFFDAFAKAMIRMSSLSPLTGKQGEIRLNCRVVNSKSKIM 333          
The following BLAST results are available for this feature:
BLAST of CF835800 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER23_ARATH4.510e-3842.59Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=... [more]
PER72_ARATH7.693e-3843.26Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=... [more]
PER53_ARATH7.693e-3840.93Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=... [more]
PERA2_ARMRU1.714e-3740.93Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1... [more]
PERN1_TOBAC2.238e-3742.40Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 S... [more]
PER55_ARATH2.923e-3741.86Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=... [more]
PER18_ARATH2.923e-3743.98Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=... [more]
PERE5_ARMRU4.986e-3742.40Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1... [more]
PER3_ARMRU4.986e-3741.94Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3... [more]
PER37_ARATH6.512e-3739.91Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01O14_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01O14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835800 ID=CF835800; Name=CF835800; organism=Citrus sinensis; type=EST; length=798bp
TTTTTTTTTTTTTTTTTGCACAAACACACCCACATCCTTAACTTTTTCCG
TGGTACAATTATCAACAGATCTTAACAAACCCCTAAGCCCAGCAGCAGAC
TAAATTGGCAATTACATTGACATCAGATAGATGAATGCAACAAACTATCT
GGATTATTAATAACACTGCACTTCTTTCGAATCTCCCCTTGAGTGCCAGT
GAGAACATTCATAGCTCCCATTCTCTTCATTGACTGAGCAAACTCGGTGA
AGAACTTATCTTGGTTTCTCAACTCCATGACAATGTTTCTTGCTCCCTTA
TTGGTTAAAAGAGCAGCATCAGATTGGAATAGACCCTTGTTCTCGATAAG
AATATCATAGTAATGGCTGTCGAATTTTCGAAAACTCCCCGGGTCCAATT
CGGCAGTAGTCGTTGTGTCGGCAAGGCTCTTGCATTTGGTTTTTAAGAAT
GCAGCGTATCGTGGGTCCAATGAAGGATCTTGATCTCCATTTCCTGTGAA
ATTGTAGAGCCTGTTGCTGAAGAAGGTGCAGTGCGAAACTCCGATTGTGT
GGCCACCTGAAAGGACTACAAGATCTTTGACAGTGAGACCTTTGTCGTTA
AAATTTTTCTTGAGTTCACTGAAGTTGGCAAAAGGTGAAGGAAGCAGCAG
ATCGGCCTCAGCAGCTATGGACACACTGCCATCTCTTCTACCGGTGAGCA
CTTCCCACAGGTCCGGTTTTTGAAATTGGAATGAAACAGAATCCCTTGTA
GCCAAAGCTACGATATCGGCACAAGAAACAATTCCTGGACACCTGCTC
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