CF835801

Overview
NameCF835801
Unique NameCF835801
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length699
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835801 vs. ExPASy Swiss-Prot
Match: PER6_ARATH (Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 8.908e-29
Identity = 76/210 (36.19%), Postives = 108/210 (51.43%), Query Frame = 3
Query:   54 VCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGG--FEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDP 677
            +CL +           L  ++Y  +C   E+ +  I      + P      +R+ FHDC V GCDAS+L+ ST    +ERDA  N SL G  F+VI  IK+ +E +CP IVSC+DI+  ATR  +S     P +  V  GR+D  VS     +  L  P      +   F   GLTV+++V L G HTIG SHC  F++R++N +    P
Sbjct:    6 LCLFILVSSPCLLQANLSSDYYTKTCPEFEETLVQIVTDKQIAAPTTAVGTLRLFFHDCMVDGCDASILVASTPRKTSERDADINRSLPGDAFDVITRIKTAVELKCPNIVSCSDILVGATRSLIS-MVGGPRV-NVKFGRKDSLVSDMNRVEGKLARPNMTMDHIISIFESSGLTVQEMVALVGAHTIGFSHCKEFASRIFNKSDQNGP 213          
BLAST of CF835801 vs. ExPASy Swiss-Prot
Match: PER29_ARATH (Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 2.865e-27
Identity = 79/235 (33.62%), Postives = 118/235 (50.21%), Query Frame = 3
Query:   24 KAAGAGSLLLVCLVVFGIIGVCQGGE--------LRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNK-AERDAVPNLSLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDG-SVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDPDPSLDPR 698
            K+  A S    C +V  ++  C  G+        L  ++Y  +C   E+IVRS        +P  PA L+R+ FHDC V+GCDAS+L+      +  E D+  N  +   +++  IK+ LE  CP  VSC+D++ LA RD+V+       L  V  GR+D  S      AD  LP   A+       F +KG+T+++ V + G HTIGV+HC   +N L  F        ++DPR
Sbjct:    4 KSKVAESTAASCFLVMSLLCSCIIGDQMETNNEGLSYSYYEKTCPKVEEIVRSSLSSMFILDPTSPAALLRLMFHDCQVQGCDASILLEPIRDQQFTELDSAKNFGIRKRDLVGSIKTSLELECPKQVSCSDVIILAARDAVA--LTGGPLISVPLGRKDSLSTPSKHVADSELPPSTADVDTTLSLFANKGMTIEESVAIMGAHTIGVTHC---NNVLSRFDNANATSENMDPR 233          
BLAST of CF835801 vs. ExPASy Swiss-Prot
Match: PER42_ARATH (Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 3.742e-27
Identity = 72/198 (36.36%), Postives = 102/198 (51.52%), Query Frame = 3
Query:  102 LRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDPDPSLDP 695
            L  NFY+D+C  AEDIVR         + +     +R  FHDC V  CDAS+L++ST     E++   +  L  F  I EIK  LE  CPG+VSC+DI+ L+ R+ +  +        + TGRRDG  S     +  LP    + S + + F   G+    LV L G H++G +HC    +RLY      + DPSL+P
Sbjct:   31 LMMNFYKDTCPQAEDIVREQVKLLYKRHKNTAFSWLRNIFHDCAVESCDASLLLDSTRRELGEKEHDRSFGLRNFRYIEEIKEALERECPGVVSCSDILVLSAREGI--EAVGGPYIPLKTGRRDGLKSRTDMLESYLPDHNESISVVLEKFKSIGIDTPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPSLNP 221          
BLAST of CF835801 vs. ExPASy Swiss-Prot
Match: PERN_IPOBA (Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.682e-25
Identity = 61/146 (41.78%), Postives = 87/146 (59.59%), Query Frame = 3
Query:  198 AKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNL-SLGGFEVINEIKSELESRCPGI-VSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHC 629
            A LIR+HFHDCFV GCD  +L+N TA    E+ A  N  S+ GF VI++ K   +++C    VSCAD++A+A RD+  F+      + +  GR+D   +    A+  LP+PF N S     F DKG   +++VVL+G HT+G S C
Sbjct:   92 ASLIRLHFHDCFVDGCDGGILLNDTANFTGEQGAPANSNSVRGFSVIDQAKRNAQTKCADTPVSCADVLAIAARDA--FRKFTNQTYNITLGRQDARTANLTGANTQLPAPFDNLSIQTAKFADKGFNQREMVVLAGAHTVGFSRC 235          
BLAST of CF835801 vs. ExPASy Swiss-Prot
Match: PERX_SOLTU (Suberization-associated anionic peroxidase OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 2.270e-24
Identity = 67/180 (37.22%), Postives = 101/180 (56.11%), Query Frame = 3
Query:  102 LRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGN-KAERDAVPNL-SLGGFEVINEIKSELESRCPGI-VSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCT 632
            LR+    ++C  +   VR +      +   + A LIR+HFHDCFV GCD  +L++   G    E+++ PN  S  G+EVI + K  +   CP I VSCADI+A+A RDSV+    +   + V  GR D   +    A   LP+PF N +   + FNDK  T++++V L+G HT+G + C+
Sbjct:   71 LRQQLTPEACVFSA--VRGVVDSAIDAETRMGASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNANSARGYEVIAQAKQSVIDTCPNISVSCADILAIAARDSVAKLGGQT--YNVALGRSDARTANFTGALTQLPAPFDNLTVQIQKFNDKNFTLREMVALAGAHTVGFARCS 246          
BLAST of CF835801 vs. ExPASy Swiss-Prot
Match: PER1_SOLLC (Suberization-associated anionic peroxidase 1 OS=Solanum lycopersicum GN=TAP1 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.606e-24
Identity = 65/180 (36.11%), Postives = 104/180 (57.78%), Query Frame = 3
Query:  102 LRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGN-KAERDAVPNL-SLGGFEVINEIKSELESRCPGI-VSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCT 632
            LR+    ++C  +   VR++      +   + A LIR+HFHDCFV GCD  +L++   G    E+++ PN  S  G+EVI + K  + + CP + VSCADI+A+A RDSV+    +   + V  GR D   +  + A   LP+PF N +   + F+DK  T++++V L+G HT+G + C+
Sbjct:   72 LRQQLTPEACVFSA--VRAVVDSAIDAETRMGASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNANSARGYEVIAQAKQSVINTCPNVSVSCADILAIAARDSVAKLGGQT--YSVALGRSDARTANFSGAINQLPAPFDNLTVQIQKFSDKNFTLREMVALAGAHTVGFARCS 247          
BLAST of CF835801 vs. ExPASy Swiss-Prot
Match: PER2_SOLLC (Suberization-associated anionic peroxidase 2 OS=Solanum lycopersicum GN=TAP2 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.279e-23
Identity = 61/148 (41.22%), Postives = 91/148 (61.49%), Query Frame = 3
Query:  198 AKLIRMHFHDCFVRGCDASVLINSTAGN-KAERDAVPNL-SLGGFEVINEIKSELESRCPGI-VSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCT 632
            A LIR+HFHDCFV GCD  +L++   G    E+++ PN  S+ GFEVI + K  +   CP I VSCADI+A+A RDS++    +   + V  GR D + +  + A   LP+P  N +   + F+DK  TV+++V L+G HT+G + C+
Sbjct:  101 ASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNNNSVRGFEVIAQAKQSVVDSCPNISVSCADILAIAARDSLAKLGGQT--YTVALGRSDATTANFSGAINQLPAPSDNLTVQIQKFSDKNFTVREMVALAGAHTVGFARCS 246          
BLAST of CF835801 vs. ExPASy Swiss-Prot
Match: PERA_IPOBA (Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.558e-20
Identity = 58/146 (39.73%), Postives = 81/146 (55.48%), Query Frame = 3
Query:  198 AKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAV-PNLSLGGFEVINEIKSELESRCPGI-VSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHC 629
            A LIR+ FHDCFV GCDA +L+N TA    E+ A   N S+ GF VI + K  ++++ P + VSCADI+++A RD  SF+      + V  GR+D   +    A+  L  P  N +     F  KG    ++V L G HTIG + C
Sbjct:   91 ASLIRLFFHDCFVDGCDAGLLLNDTATFTGEQTAAGNNNSVRGFAVIEQAKQNVKTQMPDMSVSCADILSIAARD--SFEKFSGSTYTVTLGRKDARTANFTGANTQLVGPNENLTSQLTKFAAKGFNGTEMVALLGSHTIGFARC 234          
The following BLAST results are available for this feature:
BLAST of CF835801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER6_ARATH8.908e-2936.19Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 ... [more]
PER29_ARATH2.865e-2733.62Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=... [more]
PER42_ARATH3.742e-2736.36Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=... [more]
PERN_IPOBA2.682e-2541.78Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PERX_SOLTU2.270e-2437.22Suberization-associated anionic peroxidase OS=Sola... [more]
PER1_SOLLC6.606e-2436.11Suberization-associated anionic peroxidase 1 OS=So... [more]
PER2_SOLLC3.279e-2341.22Suberization-associated anionic peroxidase 2 OS=So... [more]
PERA_IPOBA7.558e-2039.73Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01O14_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01O14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835801 ID=CF835801; Name=CF835801; organism=Citrus sinensis; type=EST; length=699bp
TAACTAGTGAATTAAATATGAAGAAAGCCGCTGGGGCTGGGTCTCTTTTG
TTAGTTTGCTTAGTAGTTTTTGGTATTATAGGGGTTTGCCAAGGAGGTGA
GCTAAGGAAGAATTTCTACAGGGACAGCTGTAAATCTGCTGAAGATATCG
TCAGGAGCATCACCTGGAAAAATGCCGCCAGTAACCCTGACTTGCCGGCC
AAGCTTATCAGAATGCATTTCCATGACTGCTTTGTTAGGGGTTGCGATGC
GTCGGTTTTGATAAACTCAACTGCAGGTAACAAAGCAGAGAGGGATGCAG
TTCCGAATCTATCTTTGGGAGGTTTCGAAGTTATTAATGAGATTAAATCG
GAGCTCGAGAGCAGGTGTCCAGGAATTGTTTCTTGTGCCGATATCGTAGC
TTTGGCTACAAGGGATTCTGTTTCATTCCAATTTCAAAAACCGGACCTGT
GGGAAGTGCTCACCGGTAGAAGAGATGGCAGTGTGTCCATAGCTGCTGAG
GCCGATCTGCTGCTTCCTTCACCTTTTGCCAACTTCAGTGAACTCAAGAA
AAATTTTAACGACAAAGGTCTCACTGTCAAAGATCTTGTAGTCCTTTCAG
GTGGCCACACAATCGGAGTTTCGCACTGCACCTTCTTCAGCAACAGGCTC
TACAATTTCACAGGAAATGGAGATCCAGATCCTTCATTGGACCCACGAT
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