CF835801

Overview
NameCF835801
Unique NameCF835801
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length699
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1911 contig Csv1_Contig1911:124..822. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835801 vs. ExPASy Swiss-Prot
Match: PER40_ARATH (Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=2 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 1.122e-39
Identity = 90/179 (50.28%), Postives = 112/179 (62.57%), Query Frame = 3
Query:  117 YRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNL-SLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRL 650
            YR+SC  AE IV S        +P + A L+R+HFHDCFV GCDASVL++ T G   E+ A PNL SL GFEVI+ IKS++ES CP  VSCADI+A+A RDSV         WEV  GR+D   +    A   LPSP +  S L   F + GL+  D+V LSGGHT+G + CT F+ RL
Sbjct:   55 YRNSCPEAESIVYSWVETTVLEDPRMAASLLRLHFHDCFVNGCDASVLLDDTEGLVGEKTAPPNLNSLRGFEVIDSIKSDIESVCPETVSCADILAMAARDSV--VVSGGPRWEVEVGRKDSRTASKQAATNGLPSPNSTVSTLISTFQNLGLSQTDMVALSGGHTLGKARCTSFTARL 231          
BLAST of CF835801 vs. ExPASy Swiss-Prot
Match: PER1C_ARMRU (Peroxidase C1C (Fragment) OS=Armoracia rusticana GN=PRXC1C PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.122e-39
Identity = 86/200 (43.00%), Postives = 119/200 (59.50%), Query Frame = 3
Query:   99 ELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNL-SLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLT-VKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDPDPSLD 692
            +L   FY +SC +  +IVR I      S+P + A ++R+HFHDCFV GCDAS+L+++T   + E+DA  N  S  GF V++ IK+ +E  CP  VSCAD++ +A + SV+        W V  GRRD   +    A+  LP+P     ELK  F + GL    DLV LSGGHT G + C F  +RLYNF+  G PDP+L+
Sbjct:   10 QLTPTFYDNSCPNVSNIVRDIIINELRSDPSIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVVDRIKAAVERACPRTVSCADVLTIAAQQSVN--LAGGPSWRVPLGRRDSRQAFLDLANANLPAPSFTLPELKAAFANVGLNRPSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLN 207          
BLAST of CF835801 vs. ExPASy Swiss-Prot
Match: PER34_ARATH (Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.913e-39
Identity = 89/218 (40.83%), Postives = 126/218 (57.80%), Query Frame = 3
Query:   45 LLLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNL-SLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGL-TVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDPDPSLD 692
            + L CL++   +   Q   L   FY  SC +  +IVR        S+P + A ++R+HFHDCFV GCDAS+L+++T   + E+DA  N  S  GF VI+ +K+ +E  CP  VSCAD++ +A + SV+        W V  GRRD   +    A+  LP+PF    +LK +F + GL    DLV LSGGHT G + C F  +RLYNF+  G PDP+L+
Sbjct:   16 ITLGCLMLHASLSAAQ---LTPTFYDRSCPNVTNIVRETIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVT--LAGGPSWRVPLGRRDSLQAFLELANANLPAPFFTLPQLKASFRNVGLDRPSDLVALSGGHTFGKNQCQFILDRLYNFSNTGLPDPTLN 228          
BLAST of CF835801 vs. ExPASy Swiss-Prot
Match: PER33_ARATH (Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.499e-39
Identity = 87/216 (40.28%), Postives = 125/216 (57.87%), Query Frame = 3
Query:   60 LVVFGIIGVCQG---GELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNL-SLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGL-TVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDPDPSLD 692
            L+  G + +C      +L   FY  SC +  +IVR        S+P +   ++R+HFHDCFV GCDAS+L+++T   + E+DA+ N  S  GF VI+ +K+ +E  CP  VSCAD++ +A + SV+        W+V  GRRD   +    A+  LP+PF    +LK NF + GL    DLV LSG HT G + C F  +RLYNF+  G PDP+L+
Sbjct:   16 LITVGCLMLCASFSDAQLTPTFYDTSCPTVTNIVRDTIVNELRSDPRIAGSILRLHFHDCFVNGCDASILLDNTTSFRTEKDALGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVT--LAGGPSWKVPLGRRDSLQAFLDLANANLPAPFFTLPQLKANFKNVGLDRPSDLVALSGAHTFGKNQCRFIMDRLYNFSNTGLPDPTLN 229          
BLAST of CF835801 vs. ExPASy Swiss-Prot
Match: PER2_MAIZE (Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.499e-39
Identity = 99/222 (44.59%), Postives = 135/222 (60.81%), Query Frame = 3
Query:    3 TSELNMKKAAGAGSLLLVCLVVFGIIGVCQGGE---LRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKA-ERDAVPNL-SLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHC-TFFSNRL 650
            T+   M  +  A +LLL+          CQ      L   +YR +C  AE IV++   K  A NP   A +IRM FHDCFV GCDASVL++ T  +   E+ A PN  SL GFE+I+ IK  LE+ CPG+VSCADI+A A RD+  F  Q    +++ +GR DG+ S A+E+   L  P +N S+L  +F  KG++++DLVVLSG HT+G SHC +F S+RL
Sbjct:    5 TAPKTMPSSVFAAALLLLAAAA------CQASPYYPLELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDPTPFSPTPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDASCFLSQGKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVGRSHCSSFVSDRL 220          
BLAST of CF835801 vs. ExPASy Swiss-Prot
Match: PERP7_BRARA (Peroxidase P7 OS=Brassica rapa PE=1 SV=3)

HSP 1 Score: 161.77 bits (408), Expect = 3.263e-39
Identity = 86/189 (45.50%), Postives = 118/189 (62.43%), Query Frame = 3
Query:   99 ELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNL-SLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFT 662
            +L  NFY  SC +    V+S      +S P + A ++R+ FHDCFV GCD S+L++ T+    E++A PN  S  GF VIN+IKS +E  CPG+VSCADI+A+A RDSV  Q   P+ W V  GRRD   +  A A+  +P+P  + S+L  +F+  GL+ +D+V LSG HTIG S C  F  R+YN T
Sbjct:    1 QLTTNFYSTSCPNLLSTVKSGVKSAVSSQPRMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEQNAGPNRNSARGFTVINDIKSAVEKACPGVVSCADILAIAARDSV-VQLGGPN-WNVKVGRRDAKTASQAAANSNIPAPSMSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRCVNFRARVYNET 187          
BLAST of CF835801 vs. ExPASy Swiss-Prot
Match: PER37_ARATH (Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.263e-39
Identity = 85/200 (42.50%), Postives = 120/200 (60.00%), Query Frame = 3
Query:   99 ELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNL-SLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGL-TVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDPDPSLD 692
            +L  +FY  +C    DI  +       S+P + A ++R+HFHDCFV GCDAS+L+++T   + E+DA  N  S  GF+VI+++K+ +E  CP  VSCAD++A+A ++SV         W V  GRRD        A+  LP+PF   ++LK  F + GL    DLV LSGGHT G + C F  +RLYNF+  G PDP+LD
Sbjct:   23 QLSPSFYDKTCPQVFDIATTTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAVEKACPKTVSCADLLAIAAQESV--VLAGGPSWRVPNGRRDSLRGFMDLANDNLPAPFFTLNQLKDRFKNVGLDRASDLVALSGGHTFGKNQCQFIMDRLYNFSNTGLPDPTLD 220          
BLAST of CF835801 vs. ExPASy Swiss-Prot
Match: PER20_ARATH (Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.566e-39
Identity = 90/204 (44.12%), Postives = 125/204 (61.27%), Query Frame = 3
Query:   42 SLLLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNL-SLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRL 650
            SL+++  +   ++G   G  L K FY++SC  AE+IV+         +P + A L+R+ FHDCFV GCDASVL+++     +E+ A PNL SL GFEVI+ IK  LE  CP  VSC+DI+ALA RDSV    +    WEVL GRRD   +  A A+  +P+P ++   L  NF  +GL ++DL+ LSG HTIG + C  F  R+
Sbjct:   11 SLIVLYAITTSVLGDF-GEPLLKGFYKESCPLAEEIVKHNIEVAVLKDPRMAASLLRLQFHDCFVLGCDASVLLDTHGDMLSEKQATPNLNSLRGFEVIDYIKYLLEEACPLTVSCSDILALAARDSVF--LRGGPWWEVLLGRRDSLKASFAGANQFIPAPNSSLDSLIINFKQQGLNIQDLIALSGAHTIGKARCVSFKQRI 211          
BLAST of CF835801 vs. ExPASy Swiss-Prot
Match: PER1B_ARMRU (Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.566e-39
Identity = 87/217 (40.09%), Postives = 121/217 (55.76%), Query Frame = 3
Query:   48 LLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNL-SLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGL-TVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDPDPSLD 692
            +L+ L            +L   FY  SC +  +IVR I      S+P + A ++R+HFHDCFV GCDAS+L+++T     E+DA+ N  S  GF  ++ IK+ +E  CP  VSCAD++ +A + SV+        W V  GRRD   +    A+  LP+PF    +LK  F   GL    DLV LSGGHT G + C F  +RLYNF+  G PDP+L+
Sbjct:   12 ILITLGCLAFYASLSDAQLTPTFYDTSCPNVSNIVRDIIINELRSDPRITASILRLHFHDCFVNGCDASILLDNTTSFLTEKDALGNANSARGFPTVDRIKAAVERACPRTVSCADVLTIAAQQSVN--LAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDAFAKVGLDRPSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLN 226          
BLAST of CF835801 vs. ExPASy Swiss-Prot
Match: PER66_MAIZE (Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 9.495e-39
Identity = 90/202 (44.55%), Postives = 120/202 (59.41%), Query Frame = 3
Query:   63 VVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLG--GFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFT 662
            VV   +      +L   FY  SC +A   +RS         P + A L+R+HFHDCFVRGCDAS+L+N T+G   E+   PNL+L   GF V+N IK+++ES CPGIVSCADI+A+A RD V      P  W VL GRRD + S A +    LP P ++  +L   +N K L   D+V LSG HTIG + C+ F++ +YN T
Sbjct:   18 VVLVALASAASAQLSSTFYDRSCPNALSTIRSGVNSAVRQEPRVGASLLRLHFHDCFVRGCDASLLLNDTSG---EQSQGPNLTLNPRGFVVVNSIKAQVESVCPGIVSCADILAVAARDGV-VALGGPS-WTVLLGRRDSTASFAGQTS-DLPPPTSSLGQLLSAYNKKNLNPTDMVALSGAHTIGQAQCSSFNDHIYNDT 213          
The following BLAST results are available for this feature:
BLAST of CF835801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER40_ARATH1.122e-3950.28Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=... [more]
PER1C_ARMRU1.122e-3943.00Peroxidase C1C (Fragment) OS=Armoracia rusticana G... [more]
PER34_ARATH1.913e-3940.83Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=... [more]
PER33_ARATH2.499e-3940.28Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=... [more]
PER2_MAIZE2.499e-3944.59Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1[more]
PERP7_BRARA3.263e-3945.50Peroxidase P7 OS=Brassica rapa PE=1 SV=3[more]
PER37_ARATH3.263e-3942.50Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=... [more]
PER20_ARATH5.566e-3944.12Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=... [more]
PER1B_ARMRU5.566e-3940.09Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE... [more]
PER66_MAIZE9.495e-3944.55Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01O14_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01O14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835801 ID=CF835801; Name=CF835801; organism=Citrus sinensis; type=EST; length=699bp
TAACTAGTGAATTAAATATGAAGAAAGCCGCTGGGGCTGGGTCTCTTTTG
TTAGTTTGCTTAGTAGTTTTTGGTATTATAGGGGTTTGCCAAGGAGGTGA
GCTAAGGAAGAATTTCTACAGGGACAGCTGTAAATCTGCTGAAGATATCG
TCAGGAGCATCACCTGGAAAAATGCCGCCAGTAACCCTGACTTGCCGGCC
AAGCTTATCAGAATGCATTTCCATGACTGCTTTGTTAGGGGTTGCGATGC
GTCGGTTTTGATAAACTCAACTGCAGGTAACAAAGCAGAGAGGGATGCAG
TTCCGAATCTATCTTTGGGAGGTTTCGAAGTTATTAATGAGATTAAATCG
GAGCTCGAGAGCAGGTGTCCAGGAATTGTTTCTTGTGCCGATATCGTAGC
TTTGGCTACAAGGGATTCTGTTTCATTCCAATTTCAAAAACCGGACCTGT
GGGAAGTGCTCACCGGTAGAAGAGATGGCAGTGTGTCCATAGCTGCTGAG
GCCGATCTGCTGCTTCCTTCACCTTTTGCCAACTTCAGTGAACTCAAGAA
AAATTTTAACGACAAAGGTCTCACTGTCAAAGATCTTGTAGTCCTTTCAG
GTGGCCACACAATCGGAGTTTCGCACTGCACCTTCTTCAGCAACAGGCTC
TACAATTTCACAGGAAATGGAGATCCAGATCCTTCATTGGACCCACGAT
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