CF835801

Overview
NameCF835801
Unique NameCF835801
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length699
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835801 vs. ExPASy Swiss-Prot
Match: PER1_WHEAT (Peroxidase OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.569e-33
Identity = 88/206 (42.72%), Postives = 119/206 (57.77%), Query Frame = 3
Query:   39 GSLLLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNL-SLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLY 653
            GS   + LVV   +     G+L   FY  SC  A   ++S      +S+P + A L+R+HFHDCF  GCDASVL+        E++A PN+ SL GF VI+ IK++LES C   VSCADI+ +A RDSV      P  W V  GRRD + + A+ A+  LP P ++ S+L+  F  K L   D+V LSG HTIG + C+ F  R+Y
Sbjct:    4 GSASCISLVVLVALATAASGQLSSTFYDTSCPRALVAIKSGVAAAVSSDPRMGASLLRLHFHDCF--GCDASVLLTGM-----EQNAGPNVGSLRGFGVIDNIKTQLESVCKQTVSCADILTVAARDSV-VALGGPS-WTVPLGRRDSTTASASLANSDLPGPSSSRSQLEAAFLKKNLNTVDMVALSGAHTIGKAQCSNFRTRIY 200          
BLAST of CF835801 vs. ExPASy Swiss-Prot
Match: PER2_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 5.961e-33
Identity = 81/194 (41.75%), Postives = 117/194 (60.31%), Query Frame = 3
Query:   99 ELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDPD 680
            +L   FY  +C +A   +R+    + +SN    A +IR+ FHDCFV+GCDAS+L++   G  +ER +  N  + G+EVI+  K+ +E  CPG+VSCADI+A+A RD+ S     P  W V  GRRD + S AA+A   LP      S+L  NF +KGL  +++V LSG HT+G + C  F  R+YN T   +P+
Sbjct:   31 QLSTTFYDTTCPTALSTIRTSIRSSVSSNRRNAALVIRLLFHDCFVQGCDASLLLS---GAGSERASPANDGVLGYEVIDAAKAAVERVCPGVVSCADILAVAARDA-SVAVGGPS-WTVRLGRRDSTTSNAAQAATDLPRGNMVLSQLISNFANKGLNTREMVALSGSHTLGQARCIRFRGRIYNSTLRIEPN 219          
BLAST of CF835801 vs. ExPASy Swiss-Prot
Match: PER1_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 5.961e-33
Identity = 81/194 (41.75%), Postives = 117/194 (60.31%), Query Frame = 3
Query:   99 ELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDPD 680
            +L   FY  +C +A   +R+    + +SN    A +IR+ FHDCFV+GCDAS+L++   G  +ER +  N  + G+EVI+  K+ +E  CPG+VSCADI+A+A RD+ S     P  W V  GRRD + S AA+A   LP      S+L  NF +KGL  +++V LSG HT+G + C  F  R+YN T   +P+
Sbjct:   31 QLSTTFYDTTCPTALSTIRTSIRSSVSSNRRNAALVIRLLFHDCFVQGCDASLLLS---GAGSERASPANDGVLGYEVIDAAKAAVERVCPGVVSCADILAVAARDA-SVAVGGPS-WTVRLGRRDSTTSNAAQAATDLPRGNMVLSQLISNFANKGLNTREMVALSGSHTLGQARCIRFRGRIYNSTLRIEPN 219          
BLAST of CF835801 vs. ExPASy Swiss-Prot
Match: PER45_ARATH (Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.785e-33
Identity = 82/210 (39.05%), Postives = 117/210 (55.71%), Query Frame = 3
Query:   75 IIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGG--FEVINEIKSELESR--CPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDPDPSLD 692
            ++  C   +LR  FY++SC + E IVR+   +            +R+ FHDCFVRGCDAS++I S +    ERD   ++SL G  F+ + + K  ++S   C   VSCADI+ALATR+ V         + V  GRRDG +S  A     LP P  N ++L   F+  GL+  D++ LSG HTIG +HC   S R+YNF+     DPS++
Sbjct:   18 LLSSCVSAQLRTGFYQNSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASIMIASPS----ERDHPDDMSLAGDGFDTVVKAKQAVDSNPNCRNKVSCADILALATREVVVLTGGPS--YPVELGRRDGRISTKASVQSQLPQPEFNLNQLNGMFSRHGLSQTDMIALSGAHTIGFAHCGKMSKRIYNFSPTTRIDPSIN 221          
BLAST of CF835801 vs. ExPASy Swiss-Prot
Match: PER11_ARATH (Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.124e-31
Identity = 68/185 (36.76%), Postives = 109/185 (58.92%), Query Frame = 3
Query:  102 LRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNL-SLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLY 653
            L  ++Y+ +C +  D+++         +P   A +IR+HFHDCFV+GCD SVL++ T   + E+ A PN+ SL G+++++ IK+ +ES CPG+VSCAD++ +  RD+          W+V  GR+D   +    A   LP+P      +   F  +GL+V+D+V L G HTIG + C  F +R+Y
Sbjct:   30 LTLDYYKSTCPTVFDVIKKEMECIVKEDPRNAAIIIRLHFHDCFVQGCDGSVLLDETETLQGEKKASPNINSLKGYKIVDRIKNIIESECPGVVSCADLLTIGARDATI--LVGGPYWDVPVGRKDSKTASYELATTNLPTPEEGLISIIAKFYSQGLSVEDMVALIGAHTIGKAQCRNFRSRIY 212          
BLAST of CF835801 vs. ExPASy Swiss-Prot
Match: PER16_ARATH (Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.468e-31
Identity = 84/204 (41.18%), Postives = 113/204 (55.39%), Query Frame = 3
Query:   99 ELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGG--FEVINEIKSELES--RCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDPDPSLDPR 698
            +L+ NFYR SC + E IVR+   +            +R+ FHDCFVRGCDAS+L+ S +    E+D   + SL G  F+ + + K  L+    C   VSCADI+ALATRD V      P+ + V  GRRDG +S  A     LP P     +L   F   GL+  D++ LSG HTIG +HC  FS R+YNF+     DP+L+ R
Sbjct:   24 QLQTNFYRKSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASILLASPS----EKDHPDDKSLAGDGFDTVAKAKQALDRDPNCRNKVSCADILALATRDVVVLT-GGPN-YPVELGRRDGRLSTVASVQHSLPQPSFKLDQLNTMFARHGLSQTDMIALSGAHTIGFAHCGKFSKRIYNFSPKRPIDPTLNIR 221          
BLAST of CF835801 vs. ExPASy Swiss-Prot
Match: PER7_ARATH (Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.579e-31
Identity = 82/199 (41.21%), Postives = 113/199 (56.78%), Query Frame = 3
Query:  102 LRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDPDPSLDPR 698
            L  N+Y   C   E IV +   +   S+  L   L+R+ FHDC V GCDASVL++       ER +  + +L GFE+I++IKSE+E  CPG VSCADI+  A+R + + Q   P  W  + GRRD   S A + + + PS   + + L + F   GL V DLVVLSG HTIG + C    +RLYN+      DPS+D +
Sbjct:   51 LSLNYYDRICPDFEKIVVTKVREWTKSDSSLGPALLRLIFHDCGVTGCDASVLLDYEG---TERRSPASKTLRGFELIDDIKSEMEKSCPGKVSCADILTSASR-AATVQLGGP-YWPNVYGRRDSKHSYARDVEKV-PSGRRDVTALLETFQSYGLNVLDLVVLSGAHTIGKASCGTIQSRLYNYNATSGSDPSIDAK 243          
BLAST of CF835801 vs. ExPASy Swiss-Prot
Match: PER1_HORVU (Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.243e-30
Identity = 87/214 (40.65%), Postives = 120/214 (56.07%), Query Frame = 3
Query:   18 MKKAAGAGSLLLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNL-SLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDK-GLTVKDLVVLSGGHTIGVSHCTFFSNRLY 653
            M  ++    L+LV LV           +L   FY  SC  A   ++S       S+P + A L+R+HFHDCFV+GCDASVL++       E++A+PN  SL GF VI+ IK+++E+ C   VSCADI+ +A RDSV      P  W V  GRRD   +   EA+  LP   ++ +EL+  F  K GL   D+V LSG HTIG + C+ F  R+Y
Sbjct:    1 MASSSYTSLLVLVALVT------AASAQLSPTFYDTSCPRALATIKSGVMAAVTSDPRMGASLLRLHFHDCFVQGCDASVLLSG-----MEQNAIPNAGSLRGFGVIDSIKTQIEAICKQTVSCADILTVAARDSV-VALGGPS-WTVPLGRRDSIDANENEANTDLPGFNSSRAELEAAFLKKGGLNTVDMVALSGAHTIGQAQCSTFRARIY 201          
BLAST of CF835801 vs. ExPASy Swiss-Prot
Match: PER21_ARATH (Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.120e-30
Identity = 76/217 (35.02%), Postives = 114/217 (52.53%), Query Frame = 3
Query:   45 LLLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDPDPSLDP 695
            LLL    +F I      GEL  N+Y++SC  AE+I+R         + +     +R  FHDC V+ CDAS+L+ +  G ++E+ +  +  +  F+ +  IK  LE  CP  VSCADIVAL+ RD +    + P +  + TGRRD   S   + + L+P+   + S +   FN  G+ V+  V L G H++G  HC    +RLY        DP+LDP
Sbjct:   15 LLLQLFSIFHI----GNGELEMNYYKESCPKAEEIIRQQVETLYYKHGNTAVSWLRNLFHDCVVKSCDASLLLETARGVESEQKSKRSFGMRNFKYVKIIKDALEKECPSTVSCADIVALSARDGI-VMLKGPKIEMIKTGRRDSRGSYLGDVETLIPNHNDSLSSVISTFNSIGIDVEATVALLGAHSVGRVHCVNLVHRLYPTI-----DPTLDP 221          
BLAST of CF835801 vs. ExPASy Swiss-Prot
Match: PER1_SORBI (Cationic peroxidase SPC4 (Fragment) OS=Sorghum bicolor PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.820e-29
Identity = 85/209 (40.67%), Postives = 111/209 (53.11%), Query Frame = 3
Query:   30 AGAGSLLLVCLVVFGIIGVCQGGELRK---------NFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSL--GGFEVINEIKSELESRCPG-IVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLL--LPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTI 614
            A A ++  V L+          G  R+         +FY+ SC  AE IVRS        +  L A L+R+HFHDCFV+GCDASVL++ +A    E+ A PNL+L    F+ IN+I   L   C G +VSC+D++ALA RDSV         ++V  GRRD S S A + D+L  LP P A    L    +   L   DLV LSGGHTI
Sbjct:    8 AAAAAVAAVVLICSSSTATAADGNARQPPLAPGLSFDFYKRSCPKAESIVRSFVQDAVRRDVGLAAGLLRLHFHDCFVQGCDASVLLDGSATGPGEQQAPPNLTLRPTAFKAINDIHDRLHKECGGTVVSCSDVLALAARDSV--VVSGGPSYKVPLGRRD-SASFATQQDVLSGLPPPTAAVPALLAVLSKINLDATDLVALSGGHTI 213          
The following BLAST results are available for this feature:
BLAST of CF835801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER1_WHEAT1.569e-3342.72Peroxidase OS=Triticum aestivum PE=2 SV=1[more]
PER2_ZINEL5.961e-3341.75Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV... [more]
PER1_ZINEL5.961e-3341.75Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV... [more]
PER45_ARATH7.785e-3339.05Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=... [more]
PER11_ARATH1.124e-3136.76Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=... [more]
PER16_ARATH1.468e-3141.18Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=... [more]
PER7_ARATH5.579e-3141.21Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 ... [more]
PER1_HORVU1.243e-3040.65Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1[more]
PER21_ARATH2.120e-3035.02Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=... [more]
PER1_SORBI6.820e-2940.67Cationic peroxidase SPC4 (Fragment) OS=Sorghum bic... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS03_01O14_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01O14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835801 ID=CF835801; Name=CF835801; organism=Citrus sinensis; type=EST; length=699bp
TAACTAGTGAATTAAATATGAAGAAAGCCGCTGGGGCTGGGTCTCTTTTG
TTAGTTTGCTTAGTAGTTTTTGGTATTATAGGGGTTTGCCAAGGAGGTGA
GCTAAGGAAGAATTTCTACAGGGACAGCTGTAAATCTGCTGAAGATATCG
TCAGGAGCATCACCTGGAAAAATGCCGCCAGTAACCCTGACTTGCCGGCC
AAGCTTATCAGAATGCATTTCCATGACTGCTTTGTTAGGGGTTGCGATGC
GTCGGTTTTGATAAACTCAACTGCAGGTAACAAAGCAGAGAGGGATGCAG
TTCCGAATCTATCTTTGGGAGGTTTCGAAGTTATTAATGAGATTAAATCG
GAGCTCGAGAGCAGGTGTCCAGGAATTGTTTCTTGTGCCGATATCGTAGC
TTTGGCTACAAGGGATTCTGTTTCATTCCAATTTCAAAAACCGGACCTGT
GGGAAGTGCTCACCGGTAGAAGAGATGGCAGTGTGTCCATAGCTGCTGAG
GCCGATCTGCTGCTTCCTTCACCTTTTGCCAACTTCAGTGAACTCAAGAA
AAATTTTAACGACAAAGGTCTCACTGTCAAAGATCTTGTAGTCCTTTCAG
GTGGCCACACAATCGGAGTTTCGCACTGCACCTTCTTCAGCAACAGGCTC
TACAATTTCACAGGAAATGGAGATCCAGATCCTTCATTGGACCCACGAT
back to top