CF835803
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835803 vs. ExPASy Swiss-Prot
Match: ROC6_ORYSJ (Homeobox-leucine zipper protein ROC6 OS=Oryza sativa subsp. japonica GN=ROC6 PE=2 SV=2) HSP 1 Score: 244.973 bits (624), Expect = 2.759e-64 Identity = 130/206 (63.11%), Postives = 157/206 (76.21%), Query Frame = 2 Query: 2 VDDPVEPPGIVLSAATSLWLPVS-PQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAINANQSSMLILQETCTDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDG------PDSRGPLAXXXXXXXXXXXXXXXXXXXLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALQ 598 V P EPPG+VLSA TS+ LP + PQR+F++LRDE+ R +WDIL+NG MQEM HIAKGQ HGN VSLLR +A + NQ++MLILQETCTD++GSLVVYAPVD+ +MHVVMNGGDSAYV+LLPSGFAI+PDG P + L+TVAFQILVN+LPTAKLTVESV+TV+NL+SCT+QKIK+ALQ Sbjct: 661 VGAPGEPPGVVLSATTSVRLPGTLPQRVFDYLRDEQRRGDWDILANGEAMQEMDHIAKGQHHGNAVSLLRPNATSGNQNNMLILQETCTDSSGSLVVYAPVDVQSMHVVMNGGDSAYVSLLPSGFAILPDGHNNGASPSPAEVGSGASPNSAAGGGGGSNNTGSLVTVAFQILVNNLPTAKLTVESVDTVSNLLSCTIQKIKSALQ 866
BLAST of CF835803 vs. ExPASy Swiss-Prot
Match: ATML1_ARATH (Homeobox-leucine zipper protein MERISTEM L1 OS=Arabidopsis thaliana GN=ATML1 PE=2 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 3.050e-63 Identity = 128/212 (60.38%), Postives = 155/212 (73.11%), Query Frame = 2 Query: 2 VDDPVEPPGIVLSAATSLWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAINANQSSMLILQETCTDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDG-----------PDSRGPLAXXXXXXXXXXXXXXXXXXXLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALQCE 604 +DDP PPGIVLSAATS W+PV+P+R+F+FLRDE RSEWDILSNGG +QEMAHIA G+D GN VSLLR ++ N+ QS+MLILQE+CTDA+GS V+YAPVDI AM+VV++GGD YVALLPSGFAI+PDG G LLTVAFQILV+S+PTAKL++ SV TVN+LI CTV++IKAAL C+ Sbjct: 549 MDDPGRPPGIVLSAATSFWIPVAPKRVFDFLRDENSRSEWDILSNGGLVQEMAHIANGRDPGNSVSLLRVNSGNSGQSNMLILQESCTDASGSYVIYAPVDIIAMNVVLSGGDPDYVALLPSGFAILPDGSARGGGGSANASAGAGVEGGGEGNNLEVVTTTGSCGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKAALACD 760
BLAST of CF835803 vs. ExPASy Swiss-Prot
Match: HDG7_ARATH (Homeobox-leucine zipper protein HDG7 OS=Arabidopsis thaliana GN=HDG7 PE=2 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 7.032e-60 Identity = 122/195 (62.56%), Postives = 144/195 (73.85%), Query Frame = 2 Query: 14 VEPPGIVLSAATSLWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAINANQSSMLILQETCTDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPDSRGPLAXXXXXXXXXXXXXXXXXXXLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALQ 598 +EP GIVLSAATSLWLPV+ QRLF FL D + R++WDILSNG M+ + KGQ G+CVSLLRA+ + N+SSMLILQET D +G+LVVYAPVDIP+M+ VM+GGDSAYVALLPSGF+I+PDG S LLTV FQILVNSLPTAKL VESVETVNNLI+CT+ KI+AAL+ Sbjct: 490 LEPSGIVLSAATSLWLPVTQQRLFEFLCDGKCRNQWDILSNGASMENTLLVPKGQQEGSCVSLLRAAGNDQNESSMLILQETWNDVSGALVVYAPVDIPSMNTVMSGGDSAYVALLPSGFSILPDGSSSSS-----DQFDTDGGLVNQESKGCLLTVGFQILVNSLPTAKLNVESVETVNNLIACTIHKIRAALR 679
BLAST of CF835803 vs. ExPASy Swiss-Prot
Match: ROC8_ORYSJ (Homeobox-leucine zipper protein ROC8 OS=Oryza sativa subsp. japonica GN=ROC8 PE=2 SV=2) HSP 1 Score: 209.534 bits (532), Expect = 1.284e-53 Identity = 112/209 (53.59%), Postives = 146/209 (69.86%), Query Frame = 2 Query: 8 DPVEPPGIVLSAATSLWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAINANQSSMLILQETCTDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDG---------PDSRGPLAXXXXXXXXXXXXXXXXXXXLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALQCES 607 DP +P G+VLSAATS+WLPV +F F+RDE RS+WD+LS+G +QE++ I G + GNC+SLLR +NA+Q+SMLILQE+CTDA+GSLVVY+P+DIPA +VVM+G D + + LLPSGF I+PDG S GPLA ++TVAFQILV+SLP++KL ESV TVN LI+ TV++IKAAL C + Sbjct: 504 DPGQPNGVVLSAATSIWLPVPCDHVFAFVRDENTRSQWDVLSHGNQVQEVSRIPNGSNPGNCISLLR--GLNASQNSMLILQESCTDASGSLVVYSPIDIPAANVVMSGEDPSSIPLLPSGFTILPDGRPGSAAGASTSSAGPLA-----AARGGGGGGAGGGSVVTVAFQILVSSLPSSKLNAESVATVNGLITTTVEQIKAALNCSA 705
BLAST of CF835803 vs. ExPASy Swiss-Prot
Match: HDG12_ARATH (Homeobox-leucine zipper protein HDG12 OS=Arabidopsis thaliana GN=HDG12 PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.051e-51 Identity = 100/198 (50.51%), Postives = 137/198 (69.19%), Query Frame = 2 Query: 17 EPPGIVLSAATSLWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAINANQSSMLILQETCTD-AAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPDSRGPLAXXXXXXXXXXXXXXXXXXXLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALQCES 607 EP G+VL AATS WLP+SPQ +FNFL+DER R +WD+LSNG +QE+AHI G + GNC+S+LR +++Q++MLILQE+C D ++ +LV+Y PVD+PA+++ M+G D++Y+ +LPSGFAI PDG G L+TV FQI+V+ L AKL +ES+ETVNNLI+ TV +IK L C S Sbjct: 508 EPNGMVLCAATSFWLPISPQNVFNFLKDERTRPQWDVLSNGNSVQEVAHITNGSNPGNCISVLRGFNASSSQNNMLILQESCIDSSSAALVIYTPVDLPALNIAMSGQDTSYIPILPSGFAISPDGSSKGG--------------------GSLITVGFQIMVSGLQPAKLNMESMETVNNLINTTVHQIKTTLNCPS 685
BLAST of CF835803 vs. ExPASy Swiss-Prot
Match: HDG11_ARATH (Homeobox-leucine zipper protein HDG11 OS=Arabidopsis thaliana GN=HDG11 PE=2 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.244e-48 Identity = 103/194 (53.09%), Postives = 132/194 (68.04%), Query Frame = 2 Query: 17 EPPGIVLSAATSLWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAINANQS-SMLILQETCTDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPDSRGPLAXXXXXXXXXXXXXXXXXXXLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAAL 595 EP G VL AAT+ WLP SPQ +FNFL+DER R +WD+LSNG +QE+AHI+ G GNC+S+LR S NA S +MLILQE+ TD++G+ VVY+PVD+ A+++ M+G D +Y+ LL SGF I PDG S L+TV FQI+V++LPTAKL +ESVETVNNLI TV +IK AL Sbjct: 527 EPNGTVLCAATTFWLPNSPQNVFNFLKDERTRPQWDVLSNGNAVQEVAHISNGSHPGNCISVLRGS--NATHSNNMLILQESSTDSSGAFVVYSPVDLAALNIAMSGEDPSYIPLLSSGFTISPDGNGSNS-----EQGGASTSSGRASASGSLITVGFQIMVSNLPTAKLNMESVETVNNLIGTTVHQIKTAL 713
BLAST of CF835803 vs. ExPASy Swiss-Prot
Match: HGL2_ARATH (Homeobox-leucine zipper protein GLABRA 2 OS=Arabidopsis thaliana GN=GL2 PE=2 SV=3) HSP 1 Score: 171.014 bits (432), Expect = 5.063e-42 Identity = 91/199 (45.73%), Postives = 129/199 (64.82%), Query Frame = 2 Query: 8 DPVEPPGIVLSAATSLWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAINANQSSMLILQETCTDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPDSRGPLAXXXXXXXXXXXXXXXXXXXLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALQCE 604 DP EP G+++ A++SLWLPVSP LF+F RDE R EWD LSNG +Q +A+++KGQD GN V++ + + + S+ +LQ++ T++ S+VVYAPVDI +V+ G D + + +LPSGF+I+PDG +SR PL LLT+A Q L+N P AKL +ESVE+V NL+S T+ IK +LQ E Sbjct: 556 DPGEPTGVIVCASSSLWLPVSPALLFDFFRDEARRHEWDALSNGAHVQSIANLSKGQDRGNSVAI---QTVKSREKSIWVLQDSSTNSYESVVVYAPVDINTTQLVLAGHDPSNIQILPSGFSIIPDGVESR-PLV-----ITSTQDDRNSQGGSLLTLALQTLINPSPAAKLNMESVESVTNLVSVTLHNIKRSLQIE 745
BLAST of CF835803 vs. ExPASy Swiss-Prot
Match: HDG3_ARATH (Homeobox-leucine zipper protein HDG3 OS=Arabidopsis thaliana GN=HDG3 PE=2 SV=2) HSP 1 Score: 164.851 bits (416), Expect = 3.628e-40 Identity = 89/203 (43.84%), Postives = 122/203 (60.10%), Query Frame = 2 Query: 2 VDDPVEPPGIVLSAATSLWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAINANQSSMLILQETCTDAAGSLVVYAPVDIPAMHVVMN-GGDSAYVALLPSGFAIVPDGPDSRGPLAXXXXXXXXXXXXXXXXXXXLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALQCES 607 V+DP +PPG+++ AATS WLP P +F+FLR+ R WD+L NG M ++A I G D NC SLLR + ++S M+I+QET TD S V+YAPVD+ +M + ++ GGD +V +LPSGFAI PDG G LLT++FQ+LV S P A+L+V SV T NLI TV++IK C++ Sbjct: 540 VNDPGKPPGVIICAATSFWLPAPPNTVFDFLREATHRHNWDVLCNGEMMHKIAEITNGIDKRNCASLLRHG--HTSKSKMMIVQETSTDPTASFVLYAPVDMTSMDITLHGGGDPDFVVILPSGFAIFPDGTGKPG----------------GKEGGSLLTISFQMLVESGPEARLSVSSVATTENLIRTTVRRIKDLFPCQT 724
BLAST of CF835803 vs. ExPASy Swiss-Prot
Match: HDG5_ARATH (Homeobox-leucine zipper protein HDG5 OS=Arabidopsis thaliana GN=HDG5 PE=2 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 3.289e-33 Identity = 77/197 (39.09%), Postives = 117/197 (59.39%), Query Frame = 2 Query: 8 DPVEPPGIVLSAATSLWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRAS-AINANQSSMLILQETCTDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPDSRGPLAXXXXXXXXXXXXXXXXXXXLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAAL 595 +P +P G+VL A ++ WLP S ++F+ +RD+ +S ++L NG E+AHIA G GNC+SLLR + A N+ + L+LQE+C D +GSL+VY+ VD+ ++ MNG DS+ + +LP GF+IVP P LLTV Q+L +++PTAK + +V T+NN + TV +I +AL Sbjct: 616 EPGQPTGVVLCAVSTTWLPFSHHQVFDLIRDQHHQSLLEVLFNGNSPHEVAHIANGSHPGNCISLLRINVASNSWHNVELMLQESCIDNSGSLIVYSTVDVDSIQQAMNGEDSSNIPILPLGFSIVPVNPPE------------GISVNSHSPPSCLLTVGIQVLASNVPTAKPNLSTVTTINNHLCATVNQITSAL 800
BLAST of CF835803 vs. ExPASy Swiss-Prot
Match: FWA_ARATH (Homeobox-leucine zipper protein HDG6 OS=Arabidopsis thaliana GN=HDG6 PE=1 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 8.101e-32 Identity = 83/202 (41.09%), Postives = 115/202 (56.93%), Query Frame = 2 Query: 2 VDDPVEPPGIVLSAATSLWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAINANQSSMLILQETCTDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPDSRGPLAXXXXXXXXXXXXXXXXXXXLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALQCES 607 V++P E GIVLSA+TS+WLPV+ LF F+ R EWDIL+N M+E I K + HGN +SLL+ + ML+LQE DA+G++VVYAPV+ ++ +V G +S V LPSGF+IVPDG + LLT QILV PTA L +V++V L++ T+ KIK+AL ++ Sbjct: 503 VNEPGELTGIVLSASTSVWLPVNQHTLFAFISHLSFRHEWDILTNDTTMEETIRIQKAKRHGNIISLLKIV-----NNGMLVLQEIWNDASGAMVVYAPVETNSIELVKRGENSDSVKFLPSGFSIVPDGVNG-------------SYHRGNTGGGCLLTFGLQILVGINPTAALIQGTVKSVETLMAHTIVKIKSALDLQT 686 The following BLAST results are available for this feature:
BLAST of CF835803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835803 ID=CF835803; Name=CF835803; organism=Citrus sinensis; type=EST; length=678bpback to top |