CF835803
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835803 vs. ExPASy Swiss-Prot
Match: ROC3_ORYSJ (Homeobox-leucine zipper protein ROC3 OS=Oryza sativa subsp. japonica GN=ROC3 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.079e-31 Identity = 82/222 (36.94%), Postives = 123/222 (55.41%), Query Frame = 2 Query: 8 DPVEPPGIVLSAATSLWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAI-NANQSSMLILQETCTDA-AGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVP-----------------------DGPDSRGPLAXXXXXXXXXXXXXXXXXXXLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALQ 598 +P +P G++L+A ++ WLP + Q++F L DE+ R + +ILSNGG + E+AHIA G NC+SLLR +A N++Q+ L+LQE+ T GSLVV+A VD+ A+ V M+G D +Y+ LLP GFAI P +G S P LLTV Q+L +++P+AKL + SV +N+ + + +I AAL+ Sbjct: 648 EPGQPSGVILTAVSTSWLPFTHQQVFELLADEQQRCQLEILSNGGSLHEVAHIANGSHPRNCISLLRINAASNSSQNVELLLQESSTHPDGGSLVVFATVDVDAIQVTMSGEDPSYIPLLPLGFAIFPATSPSPAAAPTISSSTTTTTGNGNGETSSTP-PRNSSSNNNNADELLPPNGCLLTVGMQVLASAVPSAKLNLSSVTAINSHVCNAIHQITAALK 868
BLAST of CF835803 vs. ExPASy Swiss-Prot
Match: ROC3_ORYSI (Homeobox-leucine zipper protein ROC3 OS=Oryza sativa subsp. indica GN=ROC3 PE=3 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 3.079e-31 Identity = 82/222 (36.94%), Postives = 123/222 (55.41%), Query Frame = 2 Query: 8 DPVEPPGIVLSAATSLWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAI-NANQSSMLILQETCTDA-AGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVP-----------------------DGPDSRGPLAXXXXXXXXXXXXXXXXXXXLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALQ 598 +P +P G++L+A ++ WLP + Q++F L DE+ R + +ILSNGG + E+AHIA G NC+SLLR +A N++Q+ L+LQE+ T GSLVV+A VD+ A+ V M+G D +Y+ LLP GFAI P +G S P LLTV Q+L +++P+AKL + SV +N+ + + +I AAL+ Sbjct: 648 EPGQPSGVILTAVSTSWLPFTHQQVFELLADEQQRCQLEILSNGGSLHEVAHIANGSHPRNCISLLRINAASNSSQNVELLLQESSTHPDGGSLVVFATVDVDAIQVTMSGEDPSYIPLLPLGFAIFPATSPSPAAAPTISSSTTTTTGNGNGETSSTP-PRNSSSNNNNADELLPPNGCLLTVGMQVLASAVPSAKLNLSSVTAINSHVCNAIHQITAALK 868
BLAST of CF835803 vs. ExPASy Swiss-Prot
Match: ROC9_ORYSJ (Homeobox-leucine zipper protein ROC9 OS=Oryza sativa subsp. japonica GN=ROC9 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 9.903e-30 Identity = 77/204 (37.75%), Postives = 113/204 (55.39%), Query Frame = 2 Query: 5 DDPVEPPGIVLSAATSLWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAINANQ-SSMLILQETCTDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGF-AIVPDGPDSRGPLAXXXXXXXXXXXXXXXXXXXLLTVAFQILVN-SLPTAKLTVESVETVNNLISCTVQKIKAALQCES 607 DDP EP G++ AA S WLPV+P L + LRDE R EWD++ G +Q ++AKG+D NCV+ A + +LQ+ CT+ S + YA +D A+ V+ G DS+ V LLP GF +++PDG +S+ + L+TVAFQ+ + S A L+ +SVE V L+S T++ I+ AL C+S Sbjct: 613 DDPGEPQGLIACAAASTWLPVNPTALLDLLRDESRRPEWDVMLPGKSVQSRVNLAKGKDRTNCVTAYAARPEEEEERGGKWVLQDVCTNPCESTIAYAAIDAAALQPVIAGHDSSGVHLLPCGFISVMPDGLESKPAV-----ITASRRGGEASGAGSLVTVAFQVPASPSAAAATLSPDSVEAVTVLVSSTLRNIRKALGCDS 811
BLAST of CF835803 vs. ExPASy Swiss-Prot
Match: HDG8_ARATH (Homeobox-leucine zipper protein HDG8 OS=Arabidopsis thaliana GN=HDG8 PE=2 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 2.206e-29 Identity = 76/209 (36.36%), Postives = 118/209 (56.46%), Query Frame = 2 Query: 17 EPPGIVLSAATSLWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAINANQSSMLILQETC-----------TDAAGSLVVYAPVDIPAMHVVMNGG-DSAYVALLPSGFAIVPDGPDSRGPLAXXXXXXXXXXXXXXXXXXXLLTVAFQILVNSLP--TAKLTVESVETVNNLISCTVQKIKAALQC 601 +PPGIV+SA++SL +P++P ++F FL++ R +WDILS G + E+A I G NCV++LR + + +++Q++C DA G ++VYAP+D+ MH ++G D +++ +LPSGF I DG S LLTVAFQILV+ + ++ +SV+TV+ LIS T+Q+IK L C Sbjct: 505 QPPGIVVSASSSLAIPLTPLQVFAFLQNLDTRQQWDILSYGTVVNEIARIVTGSSETNCVTILRVHPTHEENNDKMVVQDSCKDDMLMLQDCYMDALGGMIVYAPMDMATMHFAVSGEVDPSHIPILPSGFVISSDGRRS-----------------TVEDGGTLLTVAFQILVSGKANRSREVNEKSVDTVSALISSTIQRIKGLLNC 696
BLAST of CF835803 vs. ExPASy Swiss-Prot
Match: HDG9_ARATH (Homeobox-leucine zipper protein HDG9 OS=Arabidopsis thaliana GN=HDG9 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.434e-28 Identity = 78/200 (39.00%), Postives = 111/200 (55.50%), Query Frame = 2 Query: 17 EPPGIVLSAATSLWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAINANQSSMLILQETCTDAAGSLVVYAPVDIPAMHVVMNGG-DSAYVALLPSGFAIVPDGPDSRGPLAXXXXXXXXXXXXXXXXXXXLLTVAFQILVNS---LPTAKLTVESVETVNNLISCTVQKIKAALQCE 604 +PPG+++ A +SL LP+ P ++++FL++ +R +WD+L +G P E A G + N VS L S + N + ++ILQ++ DA G +V YAP+D+ ++G D + +LPSGF I DG S G LLTVAFQILV+ P L V S TVN LIS TVQ+IKA L+CE Sbjct: 535 QPPGLIVCAGSSLSLPLPPVQVYDFLKNLEVRHQWDVLCHGNPATEAARFVTGSNPRNTVSFLEPSIRDIN-TKLMILQDSFKDALGGMVAYAPMDLNTACAAISGDIDPTTIPILPSGFMISRDGRPSEG--------------EAEGGSYTLLTVAFQILVSGPSYSPDTNLEV-SATTVNTLISSTVQRIKAMLKCE 718
BLAST of CF835803 vs. ExPASy Swiss-Prot
Match: HDG4_ARATH (Homeobox-leucine zipper protein HDG4 OS=Arabidopsis thaliana GN=HDG4 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.581e-27 Identity = 74/191 (38.74%), Postives = 109/191 (57.07%), Query Frame = 2 Query: 26 GIVLSAATSLWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASA-INANQSSMLILQETCTDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPDSRGPLAXXXXXXXXXXXXXXXXXXXLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAAL 595 G+V A + LP S Q++F+ LRD + S+ +IL G QE+AHIA G GN +SLLR + N++ + L+LQETCTD +GSL+VY+ VD A+ + MNG D + + LLP GF++VP P LLTVA Q+L +++ T +L + +V +N+ I TV +I +AL Sbjct: 525 GLVPCAVSVTLLPYSHQQVFDLLRDNQRLSQLEILFMGSSFQEVAHIANGSHLGNSISLLRINVESNSSHNVELMLQETCTDNSGSLLVYSTVDPVAVQLAMNGEDPSEIPLLPVGFSVVPVNPSD------------GVEGSSVSSPSCLLTVAIQVLGSNVTTERLDLSTVSVINHRICATVNRITSAL 703
BLAST of CF835803 vs. ExPASy Swiss-Prot
Match: HDG10_ARATH (Homeobox-leucine zipper protein HDG10 OS=Arabidopsis thaliana GN=HDG10 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.253e-24 Identity = 70/199 (35.18%), Postives = 108/199 (54.27%), Query Frame = 2 Query: 17 EPPGIVLSAATSLWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAINANQSSMLILQETCTDAAGSLVVYAPVDIPAMHVVMNGG-DSAYVALLPSGFAIVPDGPDSRGPLAXXXXXXXXXXXXXXXXXXXLLTVAFQILVN--SLPTAKLTVESVETVNNLISCTVQKIKAALQCE 604 +PPG+++ A +SL LP+ P ++++FLR+ +R +WD+ G P+ E A G D N V+ L+ S++ + ++ILQ+ DA G +VVYAP+++ + ++G D + + +LPSGF I D S + LLT+AFQI V S T +S TVN L+S VQ+IKA L CE Sbjct: 526 QPPGLIVCAGSSLSLPLPPLQVYDFLRNLEVRHQWDVHCQGNPVTEAARFVTGPDQKNNVTFLQPSSV--GEYKLMILQDGFIDALGGMVVYAPMNLNTAYSAISGQVDPSTIPILPSGFIISRDSHPSSSEV--------------DGGSMTLLTLAFQIFVTGPSYYTDLNLKDSATTVNTLVSSAVQRIKAMLNCE 708
BLAST of CF835803 vs. ExPASy Swiss-Prot
Match: TF1_ORYSJ (Homeobox-leucine zipper protein TF1 OS=Oryza sativa subsp. japonica GN=TF1 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.216e-11 Identity = 56/204 (27.45%), Postives = 95/204 (46.57%), Query Frame = 2 Query: 32 VLSAATSLWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRAS-AINANQSSMLILQETCTDAAGSLVVYAPVDIPAMHVVM---------NGGDSAYVALLPSGFAIVPD---GPDSRGPLAXXXXXXXXXXXXXXXXXXXLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALQCE 604 +LS SL LP+ ++ F+ LR+ R +WD+L +G ++E IA+G + + V++L A ++ +ILQ DA+GS +VY+ +D M+ ++ GG S Y P+GF+++PD DS G L+T+ FQI V ++ S + L++ T+ +K L E Sbjct: 511 ILSVTASLRLPLPMRKTFDLLRNLTHRCKWDVLVHGSVVKEEVTIARGVGNDDTVTVLHCKRAGREDRGRTMILQNNGYDASGSFMVYSQIDSELMNTMVLSPSDLPPGRGGPSLY----PTGFSLLPDVEAAQDSSG-------------IALGEVGGTLMTMGFQIPVKLASGDRMYSRSAASAIRLMTDTIALVKKTLMNE 697 The following BLAST results are available for this feature:
BLAST of CF835803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835803 ID=CF835803; Name=CF835803; organism=Citrus sinensis; type=EST; length=678bpback to top |