CF835812
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835812 vs. ExPASy Swiss-Prot
Match: IF5A_CALMQ (Translation initiation factor 5A OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=eIF5A PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.749e-12 Identity = 36/81 (44.44%), Postives = 47/81 (58.02%), Query Frame = 1 Query: 133 TYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISED 375 T AG I++ YI+I PC+VVEV SKTGKHG AK VGI + G K +VP+ +VP + + Q+I IS D Sbjct: 3 TRTASAGDIKEGSYIMIDNMPCRVVEVEKSKTGKHGSAKARIVGIGVIDGVKRTIVVPTDAAVEVPVIEKFTAQVISISGD 83
BLAST of CF835812 vs. ExPASy Swiss-Prot
Match: IF5A_SULAC (Translation initiation factor 5A OS=Sulfolobus acidocaldarius GN=eif5a PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.143e-11 Identity = 41/130 (31.54%), Postives = 71/130 (54.62%), Query Frame = 1 Query: 151 GTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALK 540 G ++ Y++I G PC+VVE++ +KTGKHG AK + V I +F+G+K + P +VP + + Q++ D + E+ T DL PT+ ++++++ G AE + S MG +I +K Sbjct: 9 GDLKVGSYVMIDGEPCRVVEITKAKTGKHGSAKANVVAIGLFTGQKRSLMAPVDQQVEVPIIEKHVGQILADKGDNLTIMDLESYET-FDLEKPTENEIVSKIRPG-AE-----IEYWSVMGRRKIVRVK 131
BLAST of CF835812 vs. ExPASy Swiss-Prot
Match: IF5A_METKA (Translation initiation factor 5A OS=Methanopyrus kandleri GN=eif5a PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.143e-11 Identity = 42/129 (32.56%), Postives = 65/129 (50.39%), Query Frame = 1 Query: 157 IRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKD 543 ++K YI+I PCK+VE +TS GKHG AK V + +F GKK P DVP + R Q++ D V L+ +++ P DE L +QL+ G ++ M + G+ +I +K+ Sbjct: 13 LKKGKYIMIDDEPCKIVEYTTSSPGKHGSAKARIVAVGLFDGKKRTLTKPVDAKVDVPVIERKTAQVVSDMGD-TVQLMDMETYETFEVQKPEDEELASQLEPG------TMVEYMEAAGKRKIVGIKE 134
BLAST of CF835812 vs. ExPASy Swiss-Prot
Match: IF5A_HYPBU (Translation initiation factor 5A OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=eIF5A PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.545e-11 Identity = 38/106 (35.85%), Postives = 58/106 (54.72%), Query Frame = 1 Query: 151 GTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDG 468 G ++ YIVI G PC++VE+S +KTGKHG AK H V + +FSG K P +VP +++ Q+I D V ++ ++ P DE L ++L+ G Sbjct: 9 GELKVGSYIVIDGEPCRIVEMSKAKTGKHGSAKAHVVAVCLFSGNKKTLTAPVDARVEVPIIDKRIGQVIADMGD-MVQIMDMETYETFEVEKPKDEDLKSKLQPG 113
BLAST of CF835812 vs. ExPASy Swiss-Prot
Match: IF5A_THENV (Translation initiation factor 5A OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=eIF5A PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.342e-11 Identity = 31/77 (40.26%), Postives = 46/77 (59.74%), Query Frame = 1 Query: 145 QAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISED 375 +AG +++ Y+VI G PC+VVE+ SKTGKHG AK V + +F G K +P +VP + + Q++ IS D Sbjct: 7 EAGELKEGSYVVIDGEPCRVVEIEKSKTGKHGSAKARIVAVGVFDGGKRTLSLPVDAQVEVPIIEKFTAQVLSISGD 83
BLAST of CF835812 vs. ExPASy Swiss-Prot
Match: IF5A_PYRAE (Translation initiation factor 5A OS=Pyrobaculum aerophilum GN=eif5a PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 4.342e-11 Identity = 30/77 (38.96%), Postives = 46/77 (59.74%), Query Frame = 1 Query: 145 QAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISED 375 +AG +++ Y+VI G PC+VVE+ SKTGKHG AK V + +F G K +P +VP + + Q++ +S D Sbjct: 13 EAGELKEGSYVVIDGEPCRVVEIEKSKTGKHGSAKARIVAVGVFDGGKRTLSLPVDAQVEVPIIEKFTAQILSVSGD 89
BLAST of CF835812 vs. ExPASy Swiss-Prot
Match: IF5A_KORCO (Translation initiation factor 5A OS=Korarchaeum cryptofilum (strain OPF8) GN=eIF5A PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.342e-11 Identity = 42/127 (33.07%), Postives = 65/127 (51.18%), Query Frame = 1 Query: 148 AGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQI 528 AG +RK Y+++ PC+V+EVS SK GKHG AK IF G + I P+ ++P V++ Q+I++ V L+ +L LP D L ++LK G + + SMG+ +I Sbjct: 8 AGDLRKGSYVILDDEPCEVLEVSKSKPGKHGSAKVRVEARGIFDGARRSKIFPADALVEIPIVDKKTAQVINV-YGNVVQLMDLETYETFELPLPEDPELASRLKSG------IEVEYWESMGKRKI 127
BLAST of CF835812 vs. ExPASy Swiss-Prot
Match: IF5A_SULIL (Translation initiation factor 5A OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=eIF5A PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.671e-11 Identity = 36/104 (34.62%), Postives = 59/104 (56.73%), Query Frame = 1 Query: 151 GTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLK 462 G ++ Y+VI G PC+VVEV+ +KTGKHG AK + V I +FSG K + P +VP + + Q+I +D + E T ++ PT++ L ++++ Sbjct: 9 GELKVGSYVVIDGEPCRVVEVTKAKTGKHGSAKANVVAIGVFSGAKKTLMAPVDQQVEVPIIEKHIGQIIADMDDKIQVMDLETYET-FEIEKPTEDELASKIR 111
BLAST of CF835812 vs. ExPASy Swiss-Prot
Match: IF5A_AERPE (Translation initiation factor 5A OS=Aeropyrum pernix GN=eif5a PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 9.673e-11 Identity = 29/64 (45.31%), Postives = 41/64 (64.06%), Query Frame = 1 Query: 151 GTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNR 342 G ++K YIVI G PC++VE+S +KTGKHG AK H V I +FSG+K + P +P + + Sbjct: 9 GDLKKGSYIVIDGEPCRIVEMSRAKTGKHGSAKAHVVAICVFSGQKKSLVAPVDTRVQIPVIEK 72 The following BLAST results are available for this feature:
BLAST of CF835812 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835812 ID=CF835812; Name=CF835812; organism=Citrus sinensis; type=EST; length=756bpback to top |