CF835821
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835821 vs. ExPASy Swiss-Prot
Match: TBB_TETPY (Tubulin beta chain OS=Tetrahymena pyriformis GN=BETA-TT1 PE=3 SV=1) HSP 1 Score: 325.865 bits (834), Expect = 1.553e-88 Identity = 153/169 (90.53%), Postives = 166/169 (98.22%), Query Frame = -3 Query: 263 RKLAVNLIPFPRLHFFMVGFVPLTSRGSQQYISLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 769 RKLAVNLIPFPRLHFFM+GF PLTSRGSQQY +LTVPELTQQM+DAKNMMCAADPRHGRYLTASA+FRG+MSTKEVDEQM+NVQNKNSSYFVEWIPNN+KSS+CDIPP+GLKMA TF+GNST+IQEMF+RV+EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV Sbjct: 251 RKLAVNLIPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSICDIPPKGLKMAVTFVGNSTAIQEMFKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
BLAST of CF835821 vs. ExPASy Swiss-Prot
Match: TBB1_SOYBN (Tubulin beta-1 chain OS=Glycine max GN=TUBB1 PE=3 SV=1) HSP 1 Score: 325.865 bits (834), Expect = 1.553e-88 Identity = 155/169 (91.72%), Postives = 162/169 (95.86%), Query Frame = -3 Query: 263 RKLAVNLIPFPRLHFFMVGFVPLTSRGSQQYISLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 769 RKLAVNLIPFPRLHFFMVGF PLTSRGSQQY SLT+PELTQQMWDA+NMMCAADPRHGRYLTASAMFRGKMSTKEVD+QMINVQNKNSSYFVEWIPNNVKSSVCDIPP GL M+STF+GNSTSIQEMFRRVSEQFT MF+RKAFLHWYTGEGMDEMEFTE +NMNDLV Sbjct: 251 RKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTIPELTQQMWDARNMMCAADPRHGRYLTASAMFRGKMSTKEVDQQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTGLSMSSTFMGNSTSIQEMFRRVSEQFTVMFKRKAFLHWYTGEGMDEMEFTEVRANMNDLV 419
BLAST of CF835821 vs. ExPASy Swiss-Prot
Match: TBB1_PARTE (Tubulin beta chain OS=Paramecium tetraurelia GN=bPT2 PE=3 SV=1) HSP 1 Score: 325.865 bits (834), Expect = 1.553e-88 Identity = 153/169 (90.53%), Postives = 166/169 (98.22%), Query Frame = -3 Query: 263 RKLAVNLIPFPRLHFFMVGFVPLTSRGSQQYISLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 769 RKLAVNLIPFPRLHFFM+GF PLTSRGSQQY +LTVPELTQQM+DAKNMMCAADPRHGRYLTASA+FRG+MSTKEVDEQM+NVQNKNSSYFVEWIPNN+KSS+CDIPP+GLKMA TF+GNST+IQEMF+RV+EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV Sbjct: 251 RKLAVNLIPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSICDIPPKGLKMAVTFVGNSTAIQEMFKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
BLAST of CF835821 vs. ExPASy Swiss-Prot
Match: TBB_NAEGR (Tubulin beta chain OS=Naegleria gruberi PE=2 SV=1) HSP 1 Score: 325.479 bits (833), Expect = 2.028e-88 Identity = 155/169 (91.72%), Postives = 166/169 (98.22%), Query Frame = -3 Query: 263 RKLAVNLIPFPRLHFFMVGFVPLTSRGSQQYISLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 769 RKLAVNLIPFPRLHFF++GF PLTSRGSQQY +LTVPELTQQM+DAKNMM A+DPRHGRYLTASAMFRG+MSTKEVDEQM+NVQNKNSSYFVEWIPNN+KSSVCDIPPRGLKMA+TFIGNST+IQEMF+RVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV Sbjct: 251 RKLAVNLIPFPRLHFFLIGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAASDPRHGRYLTASAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPRGLKMAATFIGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
BLAST of CF835821 vs. ExPASy Swiss-Prot
Match: TBB2_ANEPH (Tubulin beta-2 chain (Fragment) OS=Anemia phyllitidis GN=TUBB2 PE=2 SV=1) HSP 1 Score: 325.479 bits (833), Expect = 2.028e-88 Identity = 160/169 (94.67%), Postives = 162/169 (95.86%), Query Frame = -3 Query: 263 RKLAVNLIPFPRLHFFMVGFVPLTSRGSQQYISLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 769 RKLAVNLIPFPRLHFFMVGF PLTSRGSQQY +LTVPELTQQM DAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP GLKMA TFIGNSTSIQEMFRRV +QFTAMFR KAFLHWYTGEGMDEMEFTEAESNMNDLV Sbjct: 219 RKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMRDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPVGLKMACTFIGNSTSIQEMFRRVRDQFTAMFRXKAFLHWYTGEGMDEMEFTEAESNMNDLV 387
BLAST of CF835821 vs. ExPASy Swiss-Prot
Match: TBB_EUPOC (Tubulin beta chain OS=Euplotes octocarinatus PE=3 SV=1) HSP 1 Score: 323.553 bits (828), Expect = 7.705e-88 Identity = 153/169 (90.53%), Postives = 166/169 (98.22%), Query Frame = -3 Query: 263 RKLAVNLIPFPRLHFFMVGFVPLTSRGSQQYISLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 769 RKLAVNLIPFPRLHFFM+GF PLTSRGSQQY +LTVPELTQQM+DAKNMM A+DPRHGRYLTASAMFRG+MSTKEVDEQM+NVQNKNSSYFVEWIPNN+KSSVCDIPP+GLKM+STF+GNST+IQEMF+RV+EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV Sbjct: 251 RKLAVNLIPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMSASDPRHGRYLTASAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPKGLKMSSTFVGNSTAIQEMFKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
BLAST of CF835821 vs. ExPASy Swiss-Prot
Match: TBB_STYLE (Tubulin beta chain OS=Stylonychia lemnae GN=TUBB1 PE=3 SV=1) HSP 1 Score: 323.168 bits (827), Expect = 1.006e-87 Identity = 153/169 (90.53%), Postives = 164/169 (97.04%), Query Frame = -3 Query: 263 RKLAVNLIPFPRLHFFMVGFVPLTSRGSQQYISLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 769 RKLAVNLIPFPRLHFFM GF PLTSRGSQQY +LTVPELTQQM+DAKNMMCA+DPRHGRYLTASA+FRG+MSTKEVDEQM+NVQNKNSSYFVEWIPNN+KSSVCDIPP+GLKMA TF+GNST+IQEMF+RV EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV Sbjct: 251 RKLAVNLIPFPRLHFFMTGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCASDPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPKGLKMAVTFLGNSTAIQEMFKRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
BLAST of CF835821 vs. ExPASy Swiss-Prot
Match: TBB_TOXGO (Tubulin beta chain OS=Toxoplasma gondii PE=3 SV=1) HSP 1 Score: 321.242 bits (822), Expect = 3.824e-87 Identity = 150/169 (88.76%), Postives = 166/169 (98.22%), Query Frame = -3 Query: 263 RKLAVNLIPFPRLHFFMVGFVPLTSRGSQQYISLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 769 RKLAVNL+PFPRLHFF++GF PLTSRGSQQY +L+VPELTQQM+DAKNMMCA+DPRHGRYLTASAMFRG+MSTKEVDEQM+NVQNKNSSYFVEWIPNN+KSSVCDIPP+GLKM+ TF+GNST+IQEMF+RVS+QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV Sbjct: 251 RKLAVNLVPFPRLHFFLIGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMCASDPRHGRYLTASAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNMKSSVCDIPPKGLKMSVTFVGNSTAIQEMFKRVSDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
BLAST of CF835821 vs. ExPASy Swiss-Prot
Match: TBB_PLAFK (Tubulin beta chain OS=Plasmodium falciparum (isolate K1 / Thailand) PE=3 SV=2) HSP 1 Score: 321.242 bits (822), Expect = 3.824e-87 Identity = 152/169 (89.94%), Postives = 164/169 (97.04%), Query Frame = -3 Query: 263 RKLAVNLIPFPRLHFFMVGFVPLTSRGSQQYISLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 769 RKLAVNLIPFPRLHFFM+GF PLTSRGSQQY +LTVPELTQQM+DAKNMMCA+DPRHGRYLTA AMFRG+MSTKEVDEQM+NVQNKNSSYFVEWIP+N KSSVCDIPP+GLKMA TF+GNST+IQEMF+RVS+QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV Sbjct: 251 RKLAVNLIPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCASDPRHGRYLTACAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPHNTKSSVCDIPPKGLKMAVTFVGNSTAIQEMFKRVSDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
BLAST of CF835821 vs. ExPASy Swiss-Prot
Match: TBB_PLAF7 (Tubulin beta chain OS=Plasmodium falciparum (isolate 3D7) GN=PF10_0084 PE=3 SV=1) HSP 1 Score: 321.242 bits (822), Expect = 3.824e-87 Identity = 152/169 (89.94%), Postives = 164/169 (97.04%), Query Frame = -3 Query: 263 RKLAVNLIPFPRLHFFMVGFVPLTSRGSQQYISLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 769 RKLAVNLIPFPRLHFFM+GF PLTSRGSQQY +LTVPELTQQM+DAKNMMCA+DPRHGRYLTA AMFRG+MSTKEVDEQM+NVQNKNSSYFVEWIP+N KSSVCDIPP+GLKMA TF+GNST+IQEMF+RVS+QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV Sbjct: 251 RKLAVNLIPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCASDPRHGRYLTACAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPHNTKSSVCDIPPKGLKMAVTFVGNSTAIQEMFKRVSDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419 The following BLAST results are available for this feature:
BLAST of CF835821 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 407
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835821 ID=CF835821; Name=CF835821; organism=Citrus sinensis; type=EST; length=771bpback to top |