CF835835

Overview
NameCF835835
Unique NameCF835835
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length611
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835835 vs. ExPASy Swiss-Prot
Match: HSP71_HUMAN (Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN=HSPA1A PE=1 SV=5)

HSP 1 Score: 262.692 bits (670), Expect = 1.059e-69
Identity = 133/165 (80.61%), Postives = 143/165 (86.67%), Query Frame = 1
Query:  115 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 609
            AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVA+NP NTVFDAKRLIGR+F D  VQ DMK WPF+VI    DKP + V+YKGE K F  EEISSMVL KM+EIAEAYLG  + NAV+TVPAYFNDSQRQATKDAGVIAGLNV
Sbjct:    6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVI-NDGDKPKVQVSYKGETKAFYPEEISSMVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNV 169          
BLAST of CF835835 vs. ExPASy Swiss-Prot
Match: HSP74_ANOAL (Heat shock protein 70 B2 OS=Anopheles albimanus GN=HSP70B2 PE=3 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.383e-69
Identity = 131/165 (79.39%), Postives = 142/165 (86.06%), Query Frame = 1
Query:  115 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 609
            AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYV F+DTERLIGDAAKNQVAMNPTNTVFDAKRLIGR+F D  +Q DMK WPF V+     KP I V +KGE K FA EEISSMVL KM+E AEAYLG ++KNAV+TVPAYFNDSQRQATKDAG IAGLNV
Sbjct:    4 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRKFDDPKIQADMKHWPFTVV-NDGGKPKIRVEFKGERKTFAPEEISSMVLTKMKETAEAYLGQSVKNAVITVPAYFNDSQRQATKDAGAIAGLNV 167          
BLAST of CF835835 vs. ExPASy Swiss-Prot
Match: HSP72_ANOAL (Heat shock protein 70 A2 OS=Anopheles albimanus GN=HSP70A2 PE=3 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.383e-69
Identity = 131/165 (79.39%), Postives = 142/165 (86.06%), Query Frame = 1
Query:  115 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 609
            AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYV F+DTERLIGDAAKNQVAMNPTNTVFDAKRLIGR+F D  +Q DMK WPF V+     KP I V +KGE K FA EEISSMVL KM+E AEAYLG ++KNAV+TVPAYFNDSQRQATKDAG IAGLNV
Sbjct:    4 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRKFDDPKIQADMKHWPFTVV-NDCGKPKIRVEFKGERKTFAPEEISSMVLTKMKETAEAYLGQSVKNAVITVPAYFNDSQRQATKDAGAIAGLNV 167          
BLAST of CF835835 vs. ExPASy Swiss-Prot
Match: HSP71_CANFA (Heat shock 70 kDa protein 1 OS=Canis familiaris GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.383e-69
Identity = 132/165 (80.00%), Postives = 143/165 (86.67%), Query Frame = 1
Query:  115 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 609
            AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVA+NP NTVFDAKRLIGR+F D  VQ DMK WPF+V+    DKP + V+YKGE K F  EEISSMVL KM+EIAEAYLG  + NAV+TVPAYFNDSQRQATKDAGVIAGLNV
Sbjct:    6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVV-NDGDKPKVQVSYKGETKAFYPEEISSMVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNV 169          
BLAST of CF835835 vs. ExPASy Swiss-Prot
Match: HSP71_ANOAL (Heat shock protein 70 A1 OS=Anopheles albimanus GN=HSP70A1 PE=3 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.383e-69
Identity = 131/165 (79.39%), Postives = 142/165 (86.06%), Query Frame = 1
Query:  115 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 609
            AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYV F+DTERLIGDAAKNQVAMNPTNTVFDAKRLIGR+F D  +Q DMK WPF V+     KP I V +KGE K FA EEISSMVL KM+E AEAYLG ++KNAV+TVPAYFNDSQRQATKDAG IAGLNV
Sbjct:    4 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRKFDDPKIQADMKHWPFTVV-NDCGKPKIRVEFKGERKTFAPEEISSMVLTKMKETAEAYLGQSVKNAVITVPAYFNDSQRQATKDAGAIAGLNV 167          
BLAST of CF835835 vs. ExPASy Swiss-Prot
Match: HSP70_PLACB (Heat shock 70 kDa protein OS=Plasmodium cynomolgi (strain Berok) PE=2 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.383e-69
Identity = 130/165 (78.79%), Postives = 147/165 (89.09%), Query Frame = 1
Query:  115 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 609
            AIGIDLGTTYSCVGVW+++ V+IIANDQGNRTTPSYV FTDTERLIGDAAKNQVA NP NTVFDAKRLIGR+F+++SVQ DMK WPF V +G  +KPMI V+Y+GE+K F  EEISSMVL KM+E AEA+LG +IKNAV+TVPAYFNDSQRQATKDAG IAGLNV
Sbjct:   17 AIGIDLGTTYSCVGVWRNENVDIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVARNPENTVFDAKRLIGRKFTESSVQSDMKHWPFTVKSGVDEKPMIEVSYQGEKKLFHPEEISSMVLQKMKENAEAFLGKSIKNAVITVPAYFNDSQRQATKDAGTIAGLNV 181          
BLAST of CF835835 vs. ExPASy Swiss-Prot
Match: HSP70_PLAFA (Heat shock 70 kDa protein OS=Plasmodium falciparum PE=2 SV=2)

HSP 1 Score: 261.922 bits (668), Expect = 1.806e-69
Identity = 130/165 (78.79%), Postives = 146/165 (88.48%), Query Frame = 1
Query:  115 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 609
            AIGIDLGTTYSCVGVW+++ V+IIANDQGNRTTPSYV FTDTERLIGDAAKNQVA NP NTVFDAKRLIGR+F+++SVQ DMK WPF V +G  +KPMI V Y+GE+K F  EEISSMVL KM+E AEA+LG +IKNAV+TVPAYFNDSQRQATKDAG IAGLNV
Sbjct:   17 AIGIDLGTTYSCVGVWRNENVDIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVARNPENTVFDAKRLIGRKFTESSVQSDMKHWPFTVKSGVDEKPMIEVTYQGEKKLFHPEEISSMVLQKMKENAEAFLGKSIKNAVITVPAYFNDSQRQATKDAGTIAGLNV 181          
BLAST of CF835835 vs. ExPASy Swiss-Prot
Match: HS71L_MACFA (Heat shock 70 kDa protein 1-like OS=Macaca fascicularis GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 1.806e-69
Identity = 133/168 (79.17%), Postives = 145/168 (86.31%), Query Frame = 1
Query:  106 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 609
            +G AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+D  VQ DMKLWPF+VI     KP + V+YKGE K F  EEISSMVL KM+E AEA+LG  + NAV+TVPAYFNDSQRQATKDAGVIAGLNV
Sbjct:    5 KGIAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRKFNDPVVQSDMKLWPFQVI-NEGGKPKVLVSYKGENKAFYPEEISSMVLTKMKETAEAFLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNV 171          
BLAST of CF835835 vs. ExPASy Swiss-Prot
Match: HSP7B_DROME (Heat shock 70 kDa protein cognate 2 OS=Drosophila melanogaster GN=Hsc70-2 PE=1 SV=2)

HSP 1 Score: 261.151 bits (666), Expect = 3.081e-69
Identity = 132/169 (78.11%), Postives = 143/169 (84.62%), Query Frame = 1
Query:  103 GEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 609
            G+ PAIGIDLGTTYSCVGVWQ+ +VEIIANDQGNRTTPSYV F +TERLIGD AKNQVAMN  NTVFDAKRLIGR+F D  +Q D+KLWPFKVI     KP I V +KGE K+FA EEISSMVL KMREIAE YLG  +K+AVVTVPAYFNDSQRQATKDAG IAGLNV
Sbjct:    2 GKIPAIGIDLGTTYSCVGVWQNSKVEIIANDQGNRTTPSYVAFNETERLIGDPAKNQVAMNAKNTVFDAKRLIGRKFDDKKIQEDLKLWPFKVI-NEKGKPKIEVEFKGERKRFAPEEISSMVLTKMREIAEVYLGGKVKDAVVTVPAYFNDSQRQATKDAGSIAGLNV 169          
BLAST of CF835835 vs. ExPASy Swiss-Prot
Match: HSP70_BRUMA (Heat shock 70 kDa protein OS=Brugia malayi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 4.024e-69
Identity = 128/165 (77.58%), Postives = 140/165 (84.85%), Query Frame = 1
Query:  115 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 609
            AIGIDLGTTYSCVGV+ H +VEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNP NTVFDA RLIGR+F D SVQ DMK WPFKV+     KP + V YKGE K F  EEISSMVL+KM+E AEA+LG  +K+AV+TVPAYFNDSQRQATKD+G IAGLNV
Sbjct:    5 AIGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTVFDANRLIGRKFDDGSVQSDMKHWPFKVVNAGGGKPKVQVEYKGETKTFTPEEISSMVLVKMKETAEAFLGHAVKDAVITVPAYFNDSQRQATKDSGAIAGLNV 169          
The following BLAST results are available for this feature:
BLAST of CF835835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP71_HUMAN1.059e-6980.61Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN... [more]
HSP74_ANOAL1.383e-6979.39Heat shock protein 70 B2 OS=Anopheles albimanus GN... [more]
HSP72_ANOAL1.383e-6979.39Heat shock protein 70 A2 OS=Anopheles albimanus GN... [more]
HSP71_CANFA1.383e-6980.00Heat shock 70 kDa protein 1 OS=Canis familiaris GN... [more]
HSP71_ANOAL1.383e-6979.39Heat shock protein 70 A1 OS=Anopheles albimanus GN... [more]
HSP70_PLACB1.383e-6978.79Heat shock 70 kDa protein OS=Plasmodium cynomolgi ... [more]
HSP70_PLAFA1.806e-6978.79Heat shock 70 kDa protein OS=Plasmodium falciparum... [more]
HS71L_MACFA1.806e-6979.17Heat shock 70 kDa protein 1-like OS=Macaca fascicu... [more]
HSP7B_DROME3.081e-6978.11Heat shock 70 kDa protein cognate 2 OS=Drosophila ... [more]
HSP70_BRUMA4.024e-6977.58Heat shock 70 kDa protein OS=Brugia malayi GN=HSP7... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS03_01P16_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01P16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835835 ID=CF835835; Name=CF835835; organism=Citrus sinensis; type=EST; length=611bp
TTTATTTTTTACATTTGAGATCTATTTTTGTTTTTCTTCGCTGTCAAAGC
AAACTACTTTATTCTCCTTTTCCTTGCTTGAGTTTTGATAATGGCCGGAA
AAGGAGAGGGACCAGCGATCGGTATCGATTTGGGGACGACGTACTCCTGC
GTCGGAGTCTGGCAGCATGACAGAGTCGAGATTATCGCCAATGACCAAGG
GAACCGGACGACGCCGTCTTATGTGGGGTTCACCGACACGGAGCGTTTGA
TCGGGGACGCTGCTAAGAACCAGGTCGCCATGAACCCCACGAACACCGTC
TTTGATGCAAAGAGGTTGATTGGTAGGAGATTCAGCGATGCATCAGTCCA
AGGCGATATGAAGCTATGGCCATTTAAGGTGATTGCTGGACCTGCTGACA
AGCCCATGATTGGTGTTAACTACAAGGGCGAAGAGAAGCAGTTTGCTGCT
GAGGAAATCTCGTCTATGGTGCTCATCAAGATGCGTGAGATTGCTGAGGC
TTACCTTGGCGCAACTATTAAGAATGCAGTCGTTACTGTCCCTGCTTACT
TCAATGACTCACAGAGGCAGGCCACCAAGGATGCCGGTGTCATTGCTGGG
CTTAATGTGAT
back to top