CF835837

Overview
NameCF835837
Unique NameCF835837
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length774
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835837 vs. ExPASy Swiss-Prot
Match: CATO_HUMAN (Cathepsin O OS=Homo sapiens GN=CTSO PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.683e-26
Identity = 77/243 (31.69%), Postives = 120/243 (49.38%), Query Frame = 3
Query:   30 KSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP----TAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG-GVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSV--ISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV 737
            ++ F+ T+    E +     F+ +L R +    L P    TA +G+ +FS L P EF+  +L           A+    +P   LP  FDWRD   VT V++Q  CG CW+FS  GA+E A+ +    L  LS QQ++DC +          + GCNGG   +A  ++ K    + ++ +YP+   +G    F  S    ++  +S    S  ED+MA  L+  GPL V ++AV  Q Y+GG+
Sbjct:   26 RAPFTPTWPRSREREAA--AFRESLNRHRYLNSLFPSENSTAFYGINQFSYLFPEEFKAIYLRSKPSKFPRYSAEVHMSIPNVSLPLRFDWRDKQVVTQVRNQQMCGGCWAFSVVGAVESAYAIKGKPLEDLSVQQVIDCSYN---------NYGCNGGSTLNALNWLNKMQVKLVKDSEYPFKAQNGLCHYFSGSHSGFSIKGYSAYDFSDQEDEMAKALLTFGPLVVIVDAVSWQDYLGGI 257          
BLAST of CF835837 vs. ExPASy Swiss-Prot
Match: CATK_MOUSE (Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 3.749e-26
Identity = 78/239 (32.64%), Postives = 121/239 (50.63%), Query Frame = 3
Query:   18 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND----LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPLAVGINA 707
            + L+K    K Y ++ +   R  +++ NL++     L     VH     +    D+T  E  ++  GL      P+ +     L T +    +P   D+R  G VT VK+QG CGSCW+FS+ GALEG     TG+L++LS Q LVDC  E         + GC GG M +AF+Y+ + GG++ E  YPY G D  SC ++ +  AA    +  I   +E  +   + + GP++V I+A
Sbjct:   26 WELWKKTHQKQYNSKVDEISRRLIWEKNLKQISAHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLRIP---PSRSYSNDTLYTPEWEGRVPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVTE---------NYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQD-ESCMYNATAKAAKCRGYREIPVGNEKALKRAVARVGPISVSIDA 251          
BLAST of CF835837 vs. ExPASy Swiss-Prot
Match: ACP1_ENTHI (Cysteine proteinase ACP1 OS=Entamoeba histolytica GN=ACP1 PE=1 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 3.749e-26
Identity = 76/233 (32.62%), Postives = 116/233 (49.79%), Query Frame = 3
Query:    9 EHLFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA 707
            E  F  + +  +K +A + E+ YRF VF  N      ++ ++  A   +  F+D+T  EF +  LG+   +       KA +      P   DWR    +   KDQG CGSCW+F  T  LEG      G+L S SEQQLVDCD         + D+GC GG  +++ ++I +  G+  E DYPY     G+CK  K+ +A    +  V    E  +   + ++GP+AVG++A
Sbjct:   15 EVAFKQWAATHNKVFANRAEYLYRFAVFLDN------KKFVEANANTELNVFADMTHEEFIQTHLGMTYEVPETTSNVKAAVKAA---PESVDWRS--IMNPAKDQGQCGSCWTFCTTAVLEGRVNKDLGKLYSFSEQQLVDCD---------ASDNGCEGGHPSNSLKFIQENNGLGLESDYPYKAV-AGTCKKVKN-VATVTGSRRVTDGSETGLQTIIAENGPVAVGMDA 225          
BLAST of CF835837 vs. ExPASy Swiss-Prot
Match: CATK_CANFA (Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 6.395e-26
Identity = 79/239 (33.05%), Postives = 119/239 (49.79%), Query Frame = 3
Query:   18 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND----LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI-SSDEDQMAANLVKHGPLAVGINA 707
            + L+K  + K Y ++ +   R  +++ NL+      L     VH     +    D+T  E  ++  GL      P+ ++    L   D     P   D+R  G VT VK+QG CGSCW+FS+ GALEG     TG+L++LS Q LVDC  E D         GC GG M +AF+Y+ K  G++ E  YPY G D  SC ++ +  AA    +  I   +E  +   + + GP++V I+A
Sbjct:   27 WDLWKKTYRKQYNSKVDELSRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVP---PSHSRSNDTLYIPDWESRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEND---------GCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQD-ESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDA 252          
BLAST of CF835837 vs. ExPASy Swiss-Prot
Match: CATK_BOVIN (Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 6.395e-26
Identity = 78/240 (32.50%), Postives = 122/240 (50.83%), Query Frame = 3
Query:   18 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAP---ILPTND--LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI-SSDEDQMAANLVKHGPLAVGINA 707
            + L+K  + K Y ++ +   R  +++ NL+      L     VH     +    D+T  E  ++  GL    ++PA   ++     +P  +   P   D+R  G VT VK+QG CGSCW+FS+ GALEG     TG+L++LS Q LVDC  E D         GC GG M +AF+Y+ K  G++ E  YPY G D  +C ++ +  AA    +  I   +E  +   + + GP++V I+A
Sbjct:   26 WELWKKTYRKQYNSKGDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGL----KVPASRSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEND---------GCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQD-ENCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDA 251          
BLAST of CF835837 vs. ExPASy Swiss-Prot
Match: CATK_PIG (Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.091e-25
Identity = 78/239 (32.64%), Postives = 119/239 (49.79%), Query Frame = 3
Query:   18 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND----LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI-SSDEDQMAANLVKHGPLAVGINA 707
            + L+K  + K Y ++ +   R  +++ NL+      L     VH     +    D+T  E  ++  GL      P+ ++    L   D     P   D+R  G VT VK+QG CGSCW+FS+ GALEG     TG+L++LS Q LVDC  E D         GC GG M +AF+Y+ K  G++ E  YPY G D  +C ++ +  AA    +  I   +E  +   + + GP++V I+A
Sbjct:   27 WELWKKTYRKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVP---PSHSRSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEND---------GCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQD-ENCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDA 252          
BLAST of CF835837 vs. ExPASy Swiss-Prot
Match: CATK_RABIT (Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.425e-25
Identity = 78/239 (32.64%), Postives = 119/239 (49.79%), Query Frame = 3
Query:   18 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND----LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI-SSDEDQMAANLVKHGPLAVGINA 707
            + L+K  +SK Y ++ +   R  +++ NL+      L     VH     +    D+T  E  ++  GL      P+ +     L   D     P   D+R  G VT VK+QG CGSCW+FS+ GALEG     TG+L++LS Q LVDC  E         + GC GG M +AF+Y+ +  G++ E  YPY G D  SC ++ +  AA    +  I   +E  +   + + GP++V I+A
Sbjct:   26 WELWKKTYSKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVP---PSRSHSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE---------NYGCGGGYMTNAFQYVQRNRGIDSEDAYPYVGQD-ESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDA 251          
BLAST of CF835837 vs. ExPASy Swiss-Prot
Match: CATO_MOUSE (Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.430e-25
Identity = 71/205 (34.63%), Postives = 105/205 (51.22%), Query Frame = 3
Query:  138 TAVHGVTKFSDLTPSEFRRQFLGLNRRL--RLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG-GVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS--SDEDQMAANLVKHGPLAVGINAVWMQTYIGGV 737
            TA +GV +FS L P EF+  +LG       R PA+ Q+   +P   LP  FDWRD   V  V++Q  CG CW+FS   A+E A  +    L  LS QQ++DC            +SGC GG    A  ++ +    +  +  YP+   +G    F +S+   +V +FS  +    ED+MA  L+  GPL V ++A+  Q Y+GG+
Sbjct:   55 TAFYGVNQFSYLFPEEFKALYLGSKYAWAPRYPAEGQRP--IPNVSLPLRFDWRDKHVVNPVRNQEMCGGCWAFSVVSAIESARAIQGKSLDYLSVQQVIDCSFN---------NSGCLGGSPLCALRWLNETQLKLVADSQYPFKAVNGQCRHFPQSQAGVSVKDFSAYNFRGQEDEMARALLSFGPLVVIVDAMSWQDYLGGI 248          
BLAST of CF835837 vs. ExPASy Swiss-Prot
Match: CATK_RAT (Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.430e-25
Identity = 77/239 (32.22%), Postives = 120/239 (50.21%), Query Frame = 3
Query:   18 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND----LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPLAVGINA 707
            + L+K    K Y ++ +   R  +++ NL++     L      H     +    D+T  E  ++  GL      P+ +     L T +    +P   D+R  G VT VK+QG CGSCW+FS+ GALEG     TG+L++LS Q LVDC  E         + GC GG M +AF+Y+ + GG++ E  YPY G D  SC ++ +  AA    +  I   +E  +   + + GP++V I+A
Sbjct:   26 WELWKKTHGKQYNSKVDEISRRLIWEKNLKKISVHNLEASLGAHTYELAMNHLGDMTSEEVVQKMTGLRVP---PSRSFSNDTLYTPEWEGRVPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVSE---------NYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQD-ESCMYNATAKAAKCRGYREIPVGNEKALKRAVARVGPVSVSIDA 251          
BLAST of CF835837 vs. ExPASy Swiss-Prot
Match: CATK_MACMU (Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 9.234e-25
Identity = 78/240 (32.50%), Postives = 121/240 (50.42%), Query Frame = 3
Query:   18 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAP---ILPTND--LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI-SSDEDQMAANLVKHGPLAVGINA 707
            + L+K    K Y ++ +   R  +++ NL+      L     VH     +    D+T  E  ++  GL    ++PA   ++     +P  +   P   D+R  G VT VK+QG CGSCW+FS+ GALEG     TG+L++LS Q LVDC  E D         GC GG M +AF+Y+ K  G++ E  YPY G +  SC ++ +  AA    +  I   +E  +   + + GP++V I+A
Sbjct:   26 WELWKKTHRKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTNEEVVQKMTGL----KVPASHSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEND---------GCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQE-ESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDA 251          
The following BLAST results are available for this feature:
BLAST of CF835837 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
CATO_HUMAN1.683e-2631.69Cathepsin O OS=Homo sapiens GN=CTSO PE=1 SV=1[more]
CATK_MOUSE3.749e-2632.64Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2[more]
ACP1_ENTHI3.749e-2632.62Cysteine proteinase ACP1 OS=Entamoeba histolytica ... [more]
CATK_CANFA6.395e-2633.05Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1[more]
CATK_BOVIN6.395e-2632.50Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2[more]
CATK_PIG1.091e-2532.64Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1[more]
CATK_RABIT1.425e-2532.64Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 ... [more]
CATO_MOUSE2.430e-2534.63Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1[more]
CATK_RAT2.430e-2532.22Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1[more]
CATK_MACMU9.234e-2532.50Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01P17_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01P17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835837 ID=CF835837; Name=CF835837; organism=Citrus sinensis; type=EST; length=774bp
TGAACGCGGAGCACCTCTTCTCCCTCTTCAAGTCCAAATTCTCCAAGACT
TACGCCACTCAGGAGGAGCACGATTACCGATTCCGCGTGTTCAAGGCTAA
CCTCCGCCGAGCAAAGCGACGCCAGCTCCTGGACCCCACTGCTGTCCACG
GTGTCACCAAGTTCTCCGACTTAACGCCGTCTGAATTCCGCCGTCAGTTC
CTTGGCTTGAATAGGCGGCTTCGGCTACCAGCTGACGCTCAAAAGGCTCC
TATCCTCCCTACCAACGATCTTCCTACTGACTTTGACTGGCGTGATCACG
GCGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCTGGTCG
TTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGGGCGA
GCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAGTGTG
ATCCAGAGGAATCTGGTTCATGTGACTCTGGGTGCAATGGTGGGCTAATG
AACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAGAGAA
GGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGACAAAA
GCAAAATTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGATGAA
GATCAAATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGCAGTGGGTAT
CAATGCCGTTTGGATGCAAACATATATTGGAGGAGTTTCATGCCCATACA
TTTGCGGGAAGTATTTGGATCATG
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