CF835837

Overview
NameCF835837
Unique NameCF835837
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length774
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835837 vs. ExPASy Swiss-Prot
Match: BROM2_ANACO (Stem bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.526e-19
Identity = 59/170 (34.71%), Postives = 87/170 (51.18%), Query Frame = 3
Query:  270 LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA-VWMQTYIGGV-SCPYICGKYLDH 773
            +P   DWRD+GAVT VK+Q  CG+CW+F+A   +E  + +  G L  LSEQQ++DC          +   GC GG    AFE+I+   GV     YPY     G+CK D    +A ++ ++ +  + +      V   P+ V ++A    Q Y  GV + P  CG  L+H
Sbjct:    2 VPQSIDWRDYGAVTSVKNQNPCGACWAFAAIATVESIYKIKKGILEPLSEQQVLDC----------AKGYGCKGGWEFRAFEFIISNKGVASGAIYPYKAAK-GTCKTDGVPNSAYITGYARVPRNNESSMMYAVSKQPITVAVDANANFQYYKSGVFNGP--CGTSLNH 158          
BLAST of CF835837 vs. ExPASy Swiss-Prot
Match: PEPT1_PSOOV (Peptidase 1 OS=Psoroptes ovis PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.571e-19
Identity = 64/194 (32.99%), Postives = 90/194 (46.39%), Query Frame = 3
Query:   18 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFL-------GLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDG 578
            F  FK  F+K Y T E      + F A+L        ++      + +FSD++  EF+ Q+L        L +   L A AQ   I   N +P + D R  G VT +K+Q ACGSCW+FS    +E  +       + LSEQ+LVDC          +   GC G  + +   YI K G VE E+ YPY   +G
Sbjct:   26 FEEFKKAFNKHYVTPEAEQEARQNFLASLEH------IEKAGKGRINQFSDMSLEEFKNQYLMSDQAYEALKKEFDLDAGAQACQIGAVN-IPNEIDLRALGYVTKIKNQVACGSCWAFSGVATVESNYLSYDNVSLDLSEQELVDC----------ASQHGCGGDTVLNGLRYIQKNGVVE-EQSYPYKAREG 201          
BLAST of CF835837 vs. ExPASy Swiss-Prot
Match: CPP3_ENTHI (Cysteine proteinase 3 (Fragment) OS=Entamoeba histolytica GN=CPNP PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.571e-19
Identity = 55/148 (37.16%), Postives = 82/148 (55.41%), Query Frame = 3
Query:  273 PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTG---ELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA 707
            P   DWR  G VT ++DQ  CGSC++F +  ALEG   +  G     + LSE+ LV C  +       + ++GCNGGL ++ ++YI++  GV +E DYPYTGTD  +CK +    A       V  ++E ++ A L   G + V I+A
Sbjct:   88 PESVDWRAQGKVTPIRDQAQCGSCYTFGSLAALEGRLLIEKGGNANTLDLSEEHLVQCTRD-------NGNNGCNGGLGSNVYDYIIQ-NGVAKESDYPYTGTD-STCKTNVKAFAKITGYNKVPRNNEAELKAAL-SQGLVDVSIDA 225          
BLAST of CF835837 vs. ExPASy Swiss-Prot
Match: CPP2_ENTHI (Cysteine proteinase 2 OS=Entamoeba histolytica GN=CPP2 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.877e-18
Identity = 53/148 (35.81%), Postives = 82/148 (55.41%), Query Frame = 3
Query:  273 PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTG---ELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA 707
            P   DWR  G VT ++DQ  CGSC++F +  ALEG   +  G     + LSE+ +V C  +       + ++GCNGGL ++ ++YI++  GV +E DYPYTG+D  +CK +    A       V  ++E ++ A L   G + V I+A
Sbjct:   95 PESVDWRKEGKVTPIRDQAQCGSCYTFGSLAALEGRLLIEKGGDANTLDLSEEHMVQCTRD-------NGNNGCNGGLGSNVYDYIIE-HGVAKESDYPYTGSD-STCKTNVKSFAKITGYTKVPRNNEAELKAAL-SQGLVDVSIDA 232          
BLAST of CF835837 vs. ExPASy Swiss-Prot
Match: CYSP_THEAN (Cysteine proteinase OS=Theileria annulata GN=TACP PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 4.908e-18
Identity = 81/278 (29.14%), Postives = 128/278 (46.04%), Query Frame = 3
Query:   18 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFR---------RQFLGLNRRLRLPADAQKAPILPTN-----------DLPT----DFDWRDHGAVTGVKDQGA-CGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV-WMQTYIGGVSCPYICGKYLDH 773
            F  F  K+ K + + ++   RF  F+ N    K  +  +P ++  + KFSDL+  EF+         + +  L++ L     + K PI  +            DL      + +W    AV+ +KDQG  CGSCW+FS+  ++E  + L   +   LSEQ+LV+CD             GC GGL  +A EYI  + GV  E + PYTG         K+K+   + + S++  + D +  +LV   P  VGI     ++ Y GG+     CG  L+H
Sbjct:  120 FDAFVEKYKKVHRSFDQRVQRFLTFRKNYHIVKTHKPTEPYSLD-LNKFSDLSDEEFKALYPVITPPKTYTSLSKHLEFKKMSHKNPIYISKLKKAKGIEEIKDLSLITGENLNWARTDAVSPIKDQGDHCGSCWAFSSIASVESLYRLYKNKSYFLSEQELVNCD---------KSSMGCAGGLPITALEYI-HSKGVSFESEVPYTGIVSPCKPSIKNKV--FIDSISILKGN-DVVNKSLV-ISPTVVGIAVTKELKLYSGGIFTGK-CGGELNH 381          
BLAST of CF835837 vs. ExPASy Swiss-Prot
Match: PEPT1_DERFA (Peptidase 1 OS=Dermatophagoides farinae GN=DERF1 PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 8.371e-18
Identity = 61/193 (31.61%), Postives = 90/193 (46.63%), Query Frame = 3
Query:   18 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFL-------GLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 575
            F  FK  F+K YAT EE +   + F  +L+  +  +         +   SDL+  EF+ ++L        L  +  L A+     I   N +P++ D R    VT ++ QG CGSCW+FS   A E A+       + LSEQ+LVDC          +   GC+G  +    EYI + G VE E+ YPY   +
Sbjct:   26 FEEFKKAFNKNYATVEEEEVARKNFLESLKYVEANK-------GAINHLSDLSLDEFKNRYLMSAEAFEQLKTQFDLNAETSACRINSVN-VPSELDLRSLRTVTPIRMQGGCGSCWAFSGVAATESAYLAYRNTSLDLSEQELVDC----------ASQHGCHGDTIPRGIEYIQQNGVVE-ERSYPYVARE 199          
BLAST of CF835837 vs. ExPASy Swiss-Prot
Match: PEPT1_EURMA (Peptidase 1 OS=Euroglyphus maynei GN=EURM1 PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.436e-17
Identity = 60/193 (31.09%), Postives = 91/193 (47.15%), Query Frame = 3
Query:   18 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFL-------GLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 575
            F  FK  F+KTYAT E+ +   + F  +L+  +  +         +   SDL+  EF+ QFL        L  +  L A+     I   + LP++ D R    VT ++ QG CGSCW+FS   + E A+       + L+EQ+LVDC          +  +GC+G  +    EYI +  GV +E  YPY   +
Sbjct:   26 FEEFKKAFNKTYATPEKEEVARKNFLESLKYVESNK-------GAINHLSDLSLDEFKNQFLMNANAFEQLKTQFDLNAETYACSINSVS-LPSELDLRSLRTVTPIRMQGGCGSCWAFSGVASTESAYLAYRNMSLDLAEQELVDC----------ASQNGCHGDTIPRGIEYI-QQNGVVQEHYYPYVARE 199          
BLAST of CF835837 vs. ExPASy Swiss-Prot
Match: CYSP_PLAVN (Cysteine proteinase OS=Plasmodium vinckei PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.436e-17
Identity = 77/261 (29.50%), Postives = 115/261 (44.06%), Query Frame = 3
Query:   18 FSLFKSKFSKTYATQEEHDYRFRVFKAN-LRRAKRRQLLDP---TAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILP----------------TNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGEL-VSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV 737
            F  +  + +K Y   +E   RF  FK   ++  K  +++     T V  V ++SD +  EF   F  L   L +P D +   I+P                + D P   D+R        KDQG CGSCW+F+A G  E  +  +  E+ +S SEQQ+VDC  E         + GC+GG    AF Y++   GV    +YPY G +   C   +  +   V     +  +E  MA N V    +AVG +  ++  Y GGV
Sbjct:  162 FFKYMKENNKKYENMDEQLQRFENFKIRYMKTQKHNEMVGKNGLTYVQKVNQYSDFSKEEFDNYFKKL---LSVPMDLKSKYIVPLKKHLANTNLISVDNKSKDFPDSRDYRSKFNFLPPKDQGNCGSCWAFAAIGNFEYLYVHTRHEMPISFSEQQMVDCSTE---------NYGCDGGNPFYAFLYMIN-NGVCLGDEYPYKGHEDFFCLNYRCSLLGRVHFIGDVKPNELIMALNYVGPVTIAVGASEDFV-LYSGGV 408          
BLAST of CF835837 vs. ExPASy Swiss-Prot
Match: CYSP_PLAVS (Cysteine proteinase OS=Plasmodium vivax (strain Salvador I) PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.086e-17
Identity = 70/274 (25.55%), Postives = 121/274 (44.16%), Query Frame = 3
Query:   18 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTN---------------------DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGE-LVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDH 773
            F  F +K+ ++Y    E   +++ FK N  + K+    +      V +FSD +  +F   F  L   + +P   +K  ++P +                     D+P   D+R+ G V   KDQG CGSCW+F++ G +E  +     + +++LSEQ++VDC            + GC+GG    +F Y ++  G+    DY Y   D   C   + K    +S+   +  +E   A N V  GP++V +      ++ GG      C + L+H
Sbjct:  237 FFNFMNKYKRSYKDINEQMEKYKNFKMNYLKIKKHNETNQMYKMKVNQFSDYSKKDFESYFRKL---VPIPDHLKKKYVVPFSSMNNGKGKNVVTSSSGANLLADVPEILDYREKGIVHEPKDQGLCGSCWAFASVGNVECMYAKEHNKTILTLSEQEVVDC---------SKLNFGCDGGHPFYSFIYAIE-NGICMGDDYKYKAMDNLFCLNYRCKNKVTLSSVGGVKENELIRALNEV--GPVSVNVGVTDDFSFYGGGIFNGTCTEELNH 495          
BLAST of CF835837 vs. ExPASy Swiss-Prot
Match: CYSP_PLAFA (Trophozoite cysteine proteinase OS=Plasmodium falciparum PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.023e-15
Identity = 67/252 (26.59%), Postives = 109/252 (43.25%), Query Frame = 3
Query:   18 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH--GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPI---LPTNDLPTDF-------------------DWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGI 701
            F  F  + +K Y   +E   +F +FK N    K    L+  A++   V +FSD +  E +  F  L        +    P    L  N L ++F                   D+R+ G V   KDQG CGSCW+F++ G +E         ++S SEQ++VDC  +         + GC+GG    +F Y+L+   +    +Y Y   D   C   + K   ++S+   +   E+Q+   L + GPL+V +
Sbjct:  225 FFKFMKEHNKVYKNIDEQMRKFEIFKINYISIKNHNKLNKNAMYKKKVNQFSDYSEEELKEYFKTLLHVPNHMIEKYSKPFENHLKDNILISEFYTNGKRNEKDIFSKVPEILDYREKGIVHEPKDQGLCGSCWAFASVGNIESVFAKKNKNILSFSEQEVVDCSKD---------NFGCDGGHPFYSFLYVLQ-NELCLGDEYKYKAKDDMFCLNYRCKRKVSLSSIGAVK--ENQLILALNEVGPLSVNV 464          
The following BLAST results are available for this feature:
BLAST of CF835837 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
BROM2_ANACO1.526e-1934.71Stem bromelain OS=Ananas comosus PE=1 SV=1[more]
PEPT1_PSOOV7.571e-1932.99Peptidase 1 OS=Psoroptes ovis PE=1 SV=1[more]
CPP3_ENTHI7.571e-1937.16Cysteine proteinase 3 (Fragment) OS=Entamoeba hist... [more]
CPP2_ENTHI2.877e-1835.81Cysteine proteinase 2 OS=Entamoeba histolytica GN=... [more]
CYSP_THEAN4.908e-1829.14Cysteine proteinase OS=Theileria annulata GN=TACP ... [more]
PEPT1_DERFA8.371e-1831.61Peptidase 1 OS=Dermatophagoides farinae GN=DERF1 P... [more]
PEPT1_EURMA2.436e-1731.09Peptidase 1 OS=Euroglyphus maynei GN=EURM1 PE=1 SV... [more]
CYSP_PLAVN2.436e-1729.50Cysteine proteinase OS=Plasmodium vinckei PE=3 SV=... [more]
CYSP_PLAVS7.086e-1725.55Cysteine proteinase OS=Plasmodium vivax (strain Sa... [more]
CYSP_PLAFA1.023e-1526.59Trophozoite cysteine proteinase OS=Plasmodium falc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01P17_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01P17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835837 ID=CF835837; Name=CF835837; organism=Citrus sinensis; type=EST; length=774bp
TGAACGCGGAGCACCTCTTCTCCCTCTTCAAGTCCAAATTCTCCAAGACT
TACGCCACTCAGGAGGAGCACGATTACCGATTCCGCGTGTTCAAGGCTAA
CCTCCGCCGAGCAAAGCGACGCCAGCTCCTGGACCCCACTGCTGTCCACG
GTGTCACCAAGTTCTCCGACTTAACGCCGTCTGAATTCCGCCGTCAGTTC
CTTGGCTTGAATAGGCGGCTTCGGCTACCAGCTGACGCTCAAAAGGCTCC
TATCCTCCCTACCAACGATCTTCCTACTGACTTTGACTGGCGTGATCACG
GCGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCTGGTCG
TTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGGGCGA
GCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAGTGTG
ATCCAGAGGAATCTGGTTCATGTGACTCTGGGTGCAATGGTGGGCTAATG
AACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAGAGAA
GGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGACAAAA
GCAAAATTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGATGAA
GATCAAATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGCAGTGGGTAT
CAATGCCGTTTGGATGCAAACATATATTGGAGGAGTTTCATGCCCATACA
TTTGCGGGAAGTATTTGGATCATG
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