CF835837

Overview
NameCF835837
Unique NameCF835837
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length774
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7034 contig Csv1_Contig7034:253..1026. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835837 vs. ExPASy Swiss-Prot
Match: CATL1_PIG (Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.679e-34
Identity = 94/257 (36.58%), Postives = 135/257 (52.53%), Query Frame = 3
Query:   27 FKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHG----VTKFSDLTPSEFRRQFLGL-NRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSC-PYICGKYLDH 773
            +K+   + Y   EE  +R  V++ N++  +          HG    +  F D+T  EFR+   G  N++ +      ++ +L   ++P   DWR+ G VT VK+QG CGSCW+FSATGALEG  F  TG+LVSLSEQ LVDC            + GCNGGLM++AF+Y+   GG++ E+ YPY G +  SC +     AA  + F  I   E  +   +   GP++V I+A     Q Y  G+   P    K LDH
Sbjct:   32 WKATHGRLYGMNEE-GWRRAVWEKNMKMIELHNQEYSQGKHGFSMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKVFHESLVL---EVPKSVDWREKGYVTAVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRP-------QGNQGCNGGLMDNAFQYVKDNGGLDTEESYPYLGRETNSCTYKPECSAANDTGFVDIPQREKALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCSSKDLDH 277          
BLAST of CF835837 vs. ExPASy Swiss-Prot
Match: CATV_NPVRO (Viral cathepsin OS=Rachiplusia ou multiple nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.193e-34
Identity = 88/250 (35.20%), Postives = 138/250 (55.20%), Query Frame = 3
Query:    6 AEHLFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQ---KAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV 737
            A + F  F  +F+K Y ++ E   RF++F+ NL     +   D +A + + KFSDL+  E   ++ GL+    LP   Q   K  +L  P    P +FDWR    VT VK+QG CG+CW+F+   +LE    +   +L++LSEQQ++DCD           D+GCNGGL+++AFE I+K GGV+ E DYPY   D  +C+ + +K    V + +  I+  E+++   L   GP+ + I+A  +  Y  G+
Sbjct:   24 APNYFEEFVHRFNKDYGSEVEKLRRFKIFQHNLNEIIIKNQND-SAKYEINKFSDLSKDETIAKYTGLS----LPIQTQNFCKVIVLDQPPGKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDCDF---------VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYE-ADNNNCRMNTNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGI 258          
BLAST of CF835837 vs. ExPASy Swiss-Prot
Match: P34_SOYBN (P34 probable thiol protease OS=Glycine max PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.864e-34
Identity = 86/255 (33.73%), Postives = 136/255 (53.33%), Query Frame = 3
Query:   15 LFSLFKSKFSKTYATQEEHDYRFRVFKAN---LRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFL----GLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDE------DQMAANLVKHGPLAVGINAVWMQTYIGGV 737
            LF L+KS+  + Y   EE   R  +FK N   +R     +    +   G+ KF+D+TP EF +++L     +++++++     K      +  P  +DWR  G +T VK QG CG  W+FSATGA+E AH ++TG+LVSLSEQ+LVDC  E +         G   G    +FE++L+ GG+  + DYPY   + G CK +K +    +  + ++I SDE      +Q   + +   P++V I+A     Y GG+
Sbjct:   43 LFQLWKSEHGRVYHNHEEEAKRLEIFKNNSNYIRDMNANRKSPHSHRLGLNKFADITPQEFSKKYLQAPKDVSQQIKMANKKMKKEQYSCDHPPASWDWRKKGVITQVKYQGGCGRGWAFSATGAIEAAHAIATGDLVSLSEQELVDCVEESE---------GSYNGWQYQSFEWVLEHGGIATDDDYPYRAKE-GRCKANKIQDKVTIDGYETLIMSDESTESETEQAFLSAILEQPISVSIDAKDFHLYTGGI 287          
BLAST of CF835837 vs. ExPASy Swiss-Prot
Match: CYSP2_MAIZE (Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.864e-34
Identity = 90/251 (35.86%), Postives = 131/251 (52.19%), Query Frame = 3
Query:   18 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAV---SNFSVISSDEDQMAANLVKHGPLAVGINAV-WMQTYIGGVSCPYICG 758
            F+ F  ++ K+Y +  E   RFR+F  +L+  +       +   G+ +F+D++  EFR   LG  +                  LP   DWR+ G V+ VK+QG CGSCW+FS TGALE A+  +TG+ +SLSEQQLVDC    +       + GCNGGL + AFEYI   GG++ E+ YPY G + G CKF    +   V    N ++ + DE + A  LV+  P++V    +   + Y  GV     CG
Sbjct:   59 FARFAVRYGKSYESAAEVHKRFRIFSESLQLVRSTNRKGLSYRLGINRFADMSWEEFRATRLGAAQNCSATLTGNHRMRAAAVALPETKDWREDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKPISLSEQQLVDCGFAFN-------NFGCNGGLPSQAFEYIKYNGGLDTEESYPYQGVN-GICKFKNENVGVKVLDSVNITLGAEDELKDAVGLVR--PVSVAFEVITGFRLYKSGVYTSDHCG 299          
BLAST of CF835837 vs. ExPASy Swiss-Prot
Match: CYSEP_PHAVU (Vignain OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 4.885e-34
Identity = 85/236 (36.02%), Postives = 125/236 (52.97%), Query Frame = 3
Query:   15 LFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLN----RRLR-LPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA 707
            L+  ++S  + + +  E+H  RF VFKANL        +D      + KF+D+T  EFR  + G      R  R  P +           +P   DWR  GAVT VKDQG CGSCW+FS   A+EG + + T +LV+LSEQ+LVDCD E         + GCNGGLM SAFE+I + GG+  E +YPY   +G       + +A ++     + ++++      V + P++V I+A
Sbjct:   39 LYERWRSHHTVSRSLGEKHK-RFNVFKANLMHVHNTNKMDKPYKLKLNKFADMTNHEFRSTYAGSKVNHPRMFRGTPHENGAFMYEKVVSVPPSVDWRKKGAVTDVKDQGQCGSCWAFSTVVAVEGINQIKTNKLVALSEQELVDCDKE--------ENQGCNGGLMESAFEFIKQKGGITTESNYPYKAQEGTCDASKVNDLAVSIDGHENVPANDEDALLKAVANQPVSVAIDA 265          
BLAST of CF835837 vs. ExPASy Swiss-Prot
Match: CATL2_BOVIN (Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.885e-34
Identity = 95/256 (37.11%), Postives = 127/256 (49.61%), Query Frame = 3
Query:   27 FKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHG----VTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSC-PYICGKYLDH 773
            +K+   + Y   EE ++R  V++ N +             HG    +  F D+T  EFR+   G   +          P+L   D+P   DW   G VT VK+QG CGSCW+FSATGALEG  F  TG+LVSLSEQ LVDC            + GCNGGLM++AF+YI   G ++ E+ YPY  TD  SC +     AA  + F  I   E  +   +   GP++V I+A     Q Y  G+   P    K LDH
Sbjct:   32 WKATHRRLYGMNEE-EWRRAVWEKNKKIIDLHNQEYSEGKHGFRMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKLFHEPLLV--DVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSR-------AQGNQGCNGGLMDNAFQYIKDNGCLDSEESYPYLATDTNSCNYKPECSAANDTGFVDIPQREKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCSSKDLDH 277          
BLAST of CF835837 vs. ExPASy Swiss-Prot
Match: CYSP3_SOLLC (Cysteine proteinase 3 OS=Solanum lycopersicum GN=CYP-3 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 8.332e-34
Identity = 94/251 (37.45%), Postives = 136/251 (54.18%), Query Frame = 3
Query:   18 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND-LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDS-GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAA-AVSNFSVISSDEDQMAANLVKHGPLAVGINAV-WMQTYIGGVSCPYICG 758
            F+ F  +  K Y + EE   RF +F  NL+  +       +   G+ +F+DLT  EFR+  LG ++     +   K  +  TN  LP   DWR  G V+ VK QG CGSCW+FS TGALE A+  + G+ +SLSEQQLVDC        +G+ ++ GCNGGL + AFEYI   GG++ E+ YPYTG + G CKF ++ I    +S+ ++    E ++   +    P++V    V   + Y  GV     CG
Sbjct:   57 FARFAIRHRKRYDSVEEIKQRFEIFLDNLKMIRSHNRKGLSYKLGINEFTDLTWDEFRKHKLGASQNC---SATTKGNLKLTNVVLPETKDWRKDGIVSPVKAQGKCGSCWTFSTTGALEAAYAQAFGKGISLSEQQLVDC--------AGAFNNFGCNGGLPSQAFEYIKFNGGLDTEEAYPYTGKN-GICKFSQANIGVKVISSVNITLGAEYELKYAVALVRPVSVAFEVVKGFKQYKSGVYASTECG 295          
BLAST of CF835837 vs. ExPASy Swiss-Prot
Match: CFAD_DICDI (Counting factor associated protein D OS=Dictyostelium discoideum GN=cfaD PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 8.332e-34
Identity = 91/260 (35.00%), Postives = 137/260 (52.69%), Query Frame = 3
Query:    6 AEHLFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVS---NFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLD 770
            A +LF  +K++++K Y++Q+EHD RF  FKA  +        + +   G+  ++DL+  EF         R  +              +P+  DWR+   VT VKDQG CGSCW+F +TG+LEG + ++ GELVSLSEQQLVDC        +GS   GC GG  +SAF+Y+++ G +  E +YPY     G C+ D++   + VS     +V S  E  +   +   GP+A+ I+A     + Y+ GV     C   LD
Sbjct:  221 ASNLFKEYKAQYNKEYSSQDEHDERFINFKAARKIIATHNAKESSYKLGMNHYADLSNKEFNTLVKPKVARPSVTGADSVHDDESLRSIPSTVDWRNQNCVTPVKDQGICGSCWTFGSTGSLEGTNCVTNGELVSLSEQQLVDC-----AILTGS--QGCGGGFASSAFQYVMEIGSLATESNYPYL-MQNGLCR-DRTVTPSGVSITGYVNVTSGSESALQNAIATTGPVAIAIDASVDDFRYYMSGVYNNPACKNGLD 471          
BLAST of CF835837 vs. ExPASy Swiss-Prot
Match: CATS_BOVIN (Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 8.332e-34
Identity = 87/241 (36.10%), Postives = 122/241 (50.62%), Query Frame = 3
Query:    9 EHLFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPIL---PTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPLAVGINA 707
            +H + L+K  + K Y  + E   R  +++ NL+      L     +H    G+    D+T  E     + L   LR+P+   +       P   LP   DWR+ G VT VK QGACGSCW+FSA GALE    L TG+LVSLS Q LVDC        +   + GCNGG M  AF+YI+   G++ E  YPY   D G C++D    AA  S +  +    E+ +   +   GP++VGI+A
Sbjct:   25 DHHWDLWKKTYGKQYKEKNEEVARRLIWEKNLKTVTLHNLEHSMGMHSYELGMNHLGDMTSEEV----ISLMSSLRVPSQWPRNVTYKSDPNQKLPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDC------STAKYGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMD-GKCQYDVKNRAATCSRYIELPFGSEEALKEAVANKGPVSVGIDA 254          
BLAST of CF835837 vs. ExPASy Swiss-Prot
Match: CATL1_CERAE (Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 8.332e-34
Identity = 87/237 (36.71%), Postives = 124/237 (52.32%), Query Frame = 3
Query:    9 EHLFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTK----FSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA 707
            E  ++ +K+  ++ Y   EE  +R  V++ N++  +          H  T     F D+T  EFR+   G   R        + P+    + P   DWR+ G VT VK+QG CGSCW+FSATGALEG  F  TG+LVSLSEQ LVDC            + GCNGGLM+ AF+Y+   GG++ E+ YPY  T+  SCK++     A  + F  I   E  +   +   GP++V I+A
Sbjct:   26 EAQWTKWKAMHNRLYGMNEE-GWRRAVWEKNMKMIELHNQEYSQGKHSFTMAMNTFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLF--YEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDC-------SGPQGNEGCNGGLMDYAFQYVADNGGLDSEESYPYEATE-ESCKYNPEYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDA 251          
The following BLAST results are available for this feature:
BLAST of CF835837 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
CATL1_PIG1.679e-3436.58Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1[more]
CATV_NPVRO2.193e-3435.20Viral cathepsin OS=Rachiplusia ou multiple nucleop... [more]
P34_SOYBN2.864e-3433.73P34 probable thiol protease OS=Glycine max PE=1 SV... [more]
CYSP2_MAIZE2.864e-3435.86Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=... [more]
CYSEP_PHAVU4.885e-3436.02Vignain OS=Phaseolus vulgaris PE=2 SV=2[more]
CATL2_BOVIN4.885e-3437.11Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1[more]
CYSP3_SOLLC8.332e-3437.45Cysteine proteinase 3 OS=Solanum lycopersicum GN=C... [more]
CFAD_DICDI8.332e-3435.00Counting factor associated protein D OS=Dictyostel... [more]
CATS_BOVIN8.332e-3436.10Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2[more]
CATL1_CERAE8.332e-3436.71Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01P17_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01P17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835837 ID=CF835837; Name=CF835837; organism=Citrus sinensis; type=EST; length=774bp
TGAACGCGGAGCACCTCTTCTCCCTCTTCAAGTCCAAATTCTCCAAGACT
TACGCCACTCAGGAGGAGCACGATTACCGATTCCGCGTGTTCAAGGCTAA
CCTCCGCCGAGCAAAGCGACGCCAGCTCCTGGACCCCACTGCTGTCCACG
GTGTCACCAAGTTCTCCGACTTAACGCCGTCTGAATTCCGCCGTCAGTTC
CTTGGCTTGAATAGGCGGCTTCGGCTACCAGCTGACGCTCAAAAGGCTCC
TATCCTCCCTACCAACGATCTTCCTACTGACTTTGACTGGCGTGATCACG
GCGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCTGGTCG
TTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGGGCGA
GCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAGTGTG
ATCCAGAGGAATCTGGTTCATGTGACTCTGGGTGCAATGGTGGGCTAATG
AACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAGAGAA
GGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGACAAAA
GCAAAATTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGATGAA
GATCAAATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGCAGTGGGTAT
CAATGCCGTTTGGATGCAAACATATATTGGAGGAGTTTCATGCCCATACA
TTTGCGGGAAGTATTTGGATCATG
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