CF835847

Overview
NameCF835847
Unique NameCF835847
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: STK4_LEMCA (Serine/threonine-protein kinase 4 OS=Lemur catta GN=STK4 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.135e-13
Identity = 58/208 (27.88%), Postives = 97/208 (46.63%), Query Frame = -1
Query:  264 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLV------TWATPKLSEDK----VRQCV 857
            +E + ++S++ +    + V+  G     T   +  E+   GS+ DI+  R           L+  +   I     KGLEYLH       IHRDIK+ N+L+  +  AK+ADF ++ Q  D  A+ ++  V+GT  + APE       N  +D++S G+  +E+  G+ P     P     ++      T+  P+L  D     VRQC+
Sbjct:   68 QEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRN--------KTLTEDEIATILQSTLKGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT--VIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFMDFVRQCL 262          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: RIPK2_MOUSE (Receptor-interacting serine/threonine-protein kinase 2 OS=Mus musculus GN=Ripk2 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.135e-13
Identity = 49/176 (27.84%), Postives = 89/176 (50.57%), Query Frame = -1
Query:  345 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN---QAPDMAARLHSTRVLGTFGYHAPEYAMTGQ---LNAKSDVYSFGVVLLELLTGRKPVD 854
            + L +  ++ + +    + +LG C +     +  E+  NGSL+++LH +         P ++W  R +I    A G+ YLH   +P ++H D+K+ N+L+ ++   KIADF LS     +   +    S    GT  Y  PE    GQ    + K D+YS+ V++ E+L+ ++P +
Sbjct:   62 DILREAEILHKARFSYILPILGICNEPEFLGIVTEYMPNGSLNELLHRKTEY------PDIAWPLRFRILHEIALGVNYLHNM-NPPLLHHDLKTQNILLDNEFHVKIADFGLSKWRMMSLSQSRSYKSAPEGGTIIYMPPENYEPGQKSRASVKHDIYSYAVIMWEVLSRKQPFE 230          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: PLK4_NEMVE (Serine/threonine-protein kinase PLK4 OS=Nematostella vectensis GN=v1g246408 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.135e-13
Identity = 59/180 (32.78%), Postives = 83/180 (46.11%), Query Frame = -1
Query:  303 QVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWA 842
            +V +  RLKH + ++L  Y  D     L  E A NG  +  L         + G  L   +  +I +   KG+ YLH      IIHRD+   N+L+  D  AKIADF L+ +   +    H T + GT  Y +PE A       +SDV+S G +L  LL G+ P D    R   + V  A
Sbjct:   61 EVEIHCRLKHPSILELYTYFEDDNYVYLVLELAENGEANRYLR--------KQGHTLKESEVRRIMLQVVKGVLYLHSHG---IIHRDLSLGNILLSSDMDAKIADFGLATRL-SLPDEKHYT-MCGTPNYISPEIATRDPHGLESDVWSIGCMLFTLLVGKPPFDTEAVRSTLNKVVLA 227          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: MOS_MOUSE (Proto-oncogene serine/threonine-protein kinase mos OS=Mus musculus GN=Mos PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.135e-13
Identity = 50/171 (29.24%), Postives = 87/171 (50.88%), Query Frame = -1
Query:  351 VSRLKHENFVQLLGYCV-----DGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPV-----LSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST-RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 830
            ++RL+H+N V+++           +   +  EF  N +LH +++G        P P+     LS  + +K ++    GL +LH ++   I+H D+K +N+LI + DV KI+DF  S +   +  R  S   + GT+ + APE         K+D+YSFG+ L ++ T   P
Sbjct:  159 IARLRHDNIVRVVAASTRTPEDSNSLGTIIMEFGGNVTLHQVIYGAT----RSPEPLSCREQLSLGKCLKYSLDVVNGLLFLHSQS---ILHLDLKPANILISEQDVCKISDFGCSQKLQVLRCRQASPHHIGGTYTHQAPEILKGEIATPKADIYSFGITLWQMTTREVP 322          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: M3K2_ARATH (Mitogen-activated protein kinase kinase kinase 2 OS=Arabidopsis thaliana GN=ANP2 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.135e-13
Identity = 51/169 (30.18%), Postives = 84/169 (49.70%), Query Frame = -1
Query:  351 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 857
            +E   +V ++  L H N V+ LG   +  +  +  EF   GS+  +L       GA P  V+       +      GLEYLH  A   I+HRDIK +N+L+ +    K+ADF  S Q  ++A    +  + GT  + APE  +    +  +D++S G  ++E++TG+ P
Sbjct:  116 QELEEEVKLLKNLSHPNIVRYLGTVREDETLNILLEFVPGGSISSLLEKF----GAFPESVVRTYTNQLLL-----GLEYLHNHA---IMHRDIKGANILVDNQGCIKLADFGASKQVAELATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMVTGKAP 272          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: ITK_HUMAN (Tyrosine-protein kinase ITK/TSK OS=Homo sapiens GN=ITK PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.135e-13
Identity = 48/173 (27.75%), Postives = 90/173 (52.02%), Query Frame = -1
Query:  342 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVDH 857
            E+F+ +  ++ +L H   VQL G C++     L +EF  +G L D L  ++G+  A        +  + + +   +G+ YL E     +IHRD+ + N L+ ++ V K++DF ++    D      ST       + +PE     + ++KSDV+SFGV++ E+ + G+ P ++
Sbjct:  401 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAA--------ETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 561          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: YES_HUMAN (Proto-oncogene tyrosine-protein kinase Yes OS=Homo sapiens GN=YES1 PE=1 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 1.482e-13
Identity = 60/173 (34.68%), Postives = 92/173 (53.18%), Query Frame = -1
Query:  351 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRV-LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG--YHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 857
            E FL +  ++ +L+H+  V L  Y V     + +  EF S GSL D L  ++G      G  L   Q V +A   A G+ Y+      + IHRD++++N+L+ ++ V KIADF L+    D     ++ R    F   + APE A+ G+   KSDV+SFG++  EL+T GR P
Sbjct:  315 EAFLQEAQIMKKLRHDKLVPL--YAVVSEEPIYIVTEFMSKGSLLDFL--KEG-----DGKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGENLVCKIADFGLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILQTELVTKGRVP 472          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: Y9863_DICDI (Probable serine/threonine-protein kinase DDB_G0281745 OS=Dictyostelium discoideum GN=DDB_G0281745 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.482e-13
Identity = 60/243 (24.69%), Postives = 113/243 (46.50%), Query Frame = -1
Query:  117 QVSMVSRLKHENFVQLLGYCVDGTSRV-LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPLLNARP 842
            ++ ++  ++H   VQ LG   +    + +  EF   G L D L     + G  P   L+W+++++I++  A+   +LH +    I+HRD+KS N+L+  +  AK+ D  L+    +   + ++   +GT  + APE  +    +   DV+SFG+VL+E++T + P D   P   Q    +  P   +   ++C         PP            C +Y    RP+   V+  +Q + ++ P
Sbjct:  377 ELQILKEIRHPQIVQFLGVSRNEKDEIHIITEFMDGGDLFDAL-----IFGDIP---LTWKEKLRISLDIAQSCRFLHARG---ILHRDLKSQNILLSTNRRAKLCDLGLARMFEERINKRYTC--VGTEIWMAPEVCLDQSYSTAVDVFSFGIVLVEIITEKIP-DERFP---QHRFQFDAPAFLKKVPKEC---------PPDFSKLCVD----CTKYNPKERPSFIKVLDTIQNIYDSLP 589          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: LCK_HUMAN (Proto-oncogene tyrosine-protein kinase LCK OS=Homo sapiens GN=LCK PE=1 SV=6)

HSP 1 Score: 77.0258 bits (188), Expect = 1.482e-13
Identity = 54/172 (31.40%), Postives = 92/172 (53.49%), Query Frame = -1
Query:  351 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 857
            + FLA+ +++ +L+H+  V+L          ++  E+  NGSL D L    G+K       L+  + + +A   A+G+ ++ E+   + IHRD++++N+L+ D    KIADF L+    D     ++ R    F   + APE    G    KSDV+SFG++L E++T GR P
Sbjct:  283 DAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED---NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 440          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: LCK_AOTNA (Proto-oncogene tyrosine-protein kinase LCK OS=Aotus nancymaae GN=LCK PE=2 SV=4)

HSP 1 Score: 77.0258 bits (188), Expect = 1.482e-13
Identity = 54/172 (31.40%), Postives = 92/172 (53.49%), Query Frame = -1
Query:  351 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 857
            + FLA+ +++ +L+H+  V+L          ++  E+  NGSL D L    G+K       L+  + + +A   A+G+ ++ E+   + IHRD++++N+L+ D    KIADF L+    D     ++ R    F   + APE    G    KSDV+SFG++L E++T GR P
Sbjct:  283 DAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED---NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 440          
The following BLAST results are available for this feature:
BLAST of CF835847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
STK4_LEMCA1.135e-1327.88Serine/threonine-protein kinase 4 OS=Lemur catta G... [more]
RIPK2_MOUSE1.135e-1327.84Receptor-interacting serine/threonine-protein kina... [more]
PLK4_NEMVE1.135e-1332.78Serine/threonine-protein kinase PLK4 OS=Nematostel... [more]
MOS_MOUSE1.135e-1329.24Proto-oncogene serine/threonine-protein kinase mos... [more]
M3K2_ARATH1.135e-1330.18Mitogen-activated protein kinase kinase kinase 2 O... [more]
ITK_HUMAN1.135e-1327.75Tyrosine-protein kinase ITK/TSK OS=Homo sapiens GN... [more]
YES_HUMAN1.482e-1334.68Proto-oncogene tyrosine-protein kinase Yes OS=Homo... [more]
Y9863_DICDI1.482e-1324.69Probable serine/threonine-protein kinase DDB_G0281... [more]
LCK_HUMAN1.482e-1331.40Proto-oncogene tyrosine-protein kinase LCK OS=Homo... [more]
LCK_AOTNA1.482e-1331.40Proto-oncogene tyrosine-protein kinase LCK OS=Aotu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02A01_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835847 ID=CF835847; Name=CF835847; organism=Citrus sinensis; type=EST; length=857bp
TTTTTTTTTTTTTTAATAGTTTGCAAGCCTGCATGTGTGCGCATACTTGC
CCACACACAAATGGGGGAGAGAGAGAGTCACTAGCTTGACTAGCTTGCTG
ATTCACCAGCAGGTCCAGGCCGTGCATTTAGCAGGGGCTGGAGGGCTTTG
ACAACAATGCTCATATTTGGACGGAAATCAGCTTCATACTGAACACACAG
AGCAGCAACTGCAGCCATCTTTGCAACTGCCTTGGGAGGATAATCTCCTC
CTAGTCTTGCATCAACGCATTGCCTAACCTTATCTTCACTAAGTTTCGGT
GTGGCCCATGTCACTAGACTCTGCTGTCCACGTGGTAGTGTATGATCGAC
AGGTTTTCGACCTGTCAGAAGCTCAAGCAGAACAACACCAAAGCTGTATA
CATCACTCTTTGCATTCAACTGTCCAGTCATTGCATACTCAGGAGCATGA
TAACCAAAAGTTCCAAGAACACGAGTAGAATGAAGGCGAGCTGCCATATC
AGGAGCTTGATTAGATAAATCAAAGTCGGCAATCTTTGCTACATCATCAT
CAAAAATTAGTACATTGCTGGACTTAATATCGCGATGGATAATATGAGGA
TCTGCCTTCTCATGCAAGTATTCAAGCCCTTTCGCAGCCCCTACAGCAAT
TTTCACTCGCTGTTGCCATGACAAAACAGGACCAGGCTGAGCTCCTTTTA
CACCTTTCCTCCCATGAAGAATATCATGAAGAGATCCATTAGATGCAAAC
TCGTAGGCAAGCACACGGGAAGTCCCATCAACACAATACCCGAGCAGCTG
AACAAAGTTTTCATGCTTCAACCTTGATACCATGGAAACCTGTGCTAAAA
ACTCCTC
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