CF835847

Overview
NameCF835847
Unique NameCF835847
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CF835847_ssr67 microsatellite CF835847_ssr67:67..76. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig2221 contig Csv1_Contig2221:567..1423. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: BRL2_ARATH (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.423e-40
Identity = 90/202 (44.55%), Postives = 124/202 (61.39%), Query Frame = -1
Query:  252 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHG-RKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARL 854
            EF+A++  + ++KH N V LLGYC  G  R+L YEF   GSL ++LHG R G K      +L W++R KIA GAAKGL +LH    PHIIHRD+KSSNVL+  D  A+++DF ++     +   L  + + GT GY  PEY  + +  AK DVYS GVV+LE+L+G++P D     G  +LV W+  K  E K  + +D  L
Sbjct:  878 EFMAEMETLGKIKHRNLVPLLGYCKIGEERLLVYEFMQYGSLEEVLHGPRTGEKRR----ILGWEERKKIAKGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDQDMEARVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSIGVVMLEILSGKRPTDKE-EFGDTNLVGWSKMKAREGKHMEVIDEDL 1074          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: Y4391_ARATH (Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.858e-40
Identity = 96/239 (40.17%), Postives = 132/239 (55.23%), Query Frame = -1
Query:  138 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQ 854
            EF  ++ M+S+L+H + V L+GYC + +  +L YEF SNG   D L+G    K   P   L+W+QR++I +G+A+GL YLH      IIHRD+KS+N+L+ +  VAK+ADF LS           ST V G+FGY  PEY    QL  KSDVYSFGVVLLE L  R  ++  LPR Q +L  WA     +  + + +D  L G   P            C++     RP M  V+  L+
Sbjct:  566 EFQTEIQMLSKLRHRHLVSLIGYCDENSEMILVYEFMSNGPFRDHLYG----KNLAP---LTWKQRLEICIGSARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSKDVA-FGQNHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCARPAINPQLPREQVNLAEWAMQWKRKGLLEKIIDPHLAGTINPESMKKFAEAAEKCLEDYGVDRPTMGDVLWNLE 796          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: Y1755_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.169e-40
Identity = 99/243 (40.74%), Postives = 131/243 (53.91%), Query Frame = -1
Query:  129 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPLL 857
            +EF  +V ++ R+ HE  V L+GYC D     L YE    G+L + L G+ G        VLSW  R+KIA+ +A G+EYLH    P I+HRD+KS+N+L+ ++  AKIADF LS     +      T V GTFGY  PEY  T  L+ KSDVYSFGVVLLE+++G+  +D  L R   ++V W +  L    +   VD  L  DY              CV   +  RPNMS VV  L   L
Sbjct:  598 KEFKTEVELLLRVHHEKLVSLIGYCDDDNGLALIYELMGKGNLKEHLSGKPGCS------VLSWPIRLKIALESAIGIEYLHTGCKPKIVHRDVKSTNILLSEEFEAKIADFGLSRSFL-IGNEAQPTVVAGTFGYLDPEYHKTSLLSMKSDVYSFGVVLLEIISGQDVID--LSRENCNIVEWTSFILENGDIESIVDPNLHQDYDTSSAWKVVELAMSCVNRTSKERPNMSQVVHVLNECL 831          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 3.169e-40
Identity = 96/239 (40.17%), Postives = 131/239 (54.81%), Query Frame = -1
Query:  138 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQ 854
            EFL ++ M+S L H N V+L G CV+G   +L YEF  N SL   L G +  +       L W  R KI +G A+GL YLHE++   I+HRDIK++NVL+      KI+DF L+    + +  + STR+ GTFGY APEYAM G L  K+DVYSFG+V LE++ GR             L+ W      ++ + + VD RLG +Y             +C   E   RP+MS VVK L+
Sbjct:  664 EFLNEIGMISALHHPNLVKLYGCCVEGGQLLLVYEFVENNSLARALFGPQETQLR-----LDWPTRRKICIGVARGLAYLHEESRLKIVHRDIKATNVLLDKQLNPKISDFGLAKLDEEDSTHI-STRIAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVHGRSNKIERSKNNTFYLIDWVEVLREKNNLLELVDPRLGSEYNREEAMTMIQIAIMCTSSEPCERPSMSEVVKMLE 896          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.169e-40
Identity = 84/185 (45.41%), Postives = 125/185 (67.57%), Query Frame = -1
Query:  306 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSL--HDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTW 854
            EF ++++++++++H + V LLGYC+DG  ++L YE+   G+L  H      +G+K     P+L W+QR+ +A+  A+G+EYLH  A    IHRD+K SN+L+ DD  AK+ADF L   AP+    +  TR+ GTFGY APEYA+TG++  K DVYSFGV+L+EL+TGRK +D + P     LV+W
Sbjct:  630 EFKSEIAVLTKVRHRHLVTLLGYCLDGNEKLLVYEYMPQGTLSRHLFEWSEEGLK-----PLL-WKQRLTLALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIE-TRIAGTFGYLAPEYAVTGRVTTKVDVYSFGVILMELITGRKSLDESQPEESIHLVSW 807          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: Y2899_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana GN=At2g28990 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 4.139e-40
Identity = 98/252 (38.89%), Postives = 136/252 (53.97%), Query Frame = -1
Query:  102 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPLLNARPGPAGE 857
            + F A+V ++ R+ H N V L+GYC +G    L YE+  NG L   L G+ G      G VLSW+ R+KI + AA GLEYLH    P ++HRDIK++N+L+     AK+ADF LS   P    +  ST V GT GY  PEY  T  L  KSD+YSFG+VLLE+++ R  +  +  R +  +V W +  +++  +R  +D  L  DY              CV   +  RPNMS VV  L+  L +     GE
Sbjct:  616 KHFKAEVELLMRVHHINLVSLVGYCDEGEHLALIYEYMPNGDLKQHLSGKHG------GFVLSWESRLKIVLDAALGLEYLHTGCVPPMVHRDIKTTNILLDQHLQAKLADFGLSRSFPIGNEKNVSTVVAGTPGYLDPEYYQTNWLTEKSDIYSFGIVLLEIISNRPIIQQS--REKPHIVEWVSFMITKGDLRSIMDPNLHQDYDIGSVWKAIELAMSCVSLSSARRPNMSRVVNELKECLISETSRIGE 859          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 4.139e-40
Identity = 99/255 (38.82%), Postives = 143/255 (56.08%), Query Frame = -1
Query:  105 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSL-HDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD-HTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPLL--NARPGPAG 857
            +EF  +V +V++L+H N V+LLGYC++G  ++L YEF  N SL H +      +K       L W +R KI  G A+G+ YLH+ +   IIHRD+K+ N+L+ DD   KIADF ++           + RV+GT+GY +PEYAM GQ + KSDVYSFGV++LE+++G K    + +     +LVT+     S     + VD   G +Y             LCVQ +A+ RP MS +V+ L   L   A P P G
Sbjct:  365 KEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDHFLFDSTMKMK-------LDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDDDMNPKIADFGMARIFGMDQTEAMTRRVVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGMKNSSLYQMDESVGNLVTYTWRLWSNGSPSELVDPSFGDNYQTSEITRCIHIALLCVQEDAEDRPTMSSIVQMLTTSLIALAEPRPPG 612          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 5.406e-40
Identity = 92/249 (36.95%), Postives = 140/249 (56.22%), Query Frame = -1
Query:  111 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPLLNARPGP 857
            EEF  +V +V++L+H N  +LLGYC+DG  ++L YEF  N SL   L   +  +      VL WQ+R KI  G A+G+ YLH  +   IIHRD+K+SN+L+  D   KI+DF ++        + ++ R++GT+GY +PEYA+ G+ + KSDVYSFGV++LEL+TG+K        G   LVT+      E+   + VD  + G++             LCVQ ++  RP+M  ++  +       P P
Sbjct:  386 EEFKNEVDVVAKLQHRNLAKLLGYCLDGEEKILVYEFVPNKSLDYFLFDNEKRR------VLDWQRRYKIIEGIARGILYLHRDSRLTIIHRDLKASNILLDADMHPKISDFGMARIFGVDQTQANTKRIVGTYGYMSPEYAIHGKYSVKSDVYSFGVLVLELITGKKNSSFYEEDGLGDLVTYVWKLWVENSPLELVDEAMRGNFQTNEVIRCIHIALLCVQEDSSERPSMDDILVMMNSFTVTLPIP 628          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: CLV1_ARATH (Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3)

HSP 1 Score: 164.851 bits (416), Expect = 5.406e-40
Identity = 101/246 (41.06%), Postives = 141/246 (57.32%), Query Frame = -1
Query:  141 FLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQ---------CVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKAL 851
            F A++  + R++H + V+LLGY  +  + +L YE+  NGSL ++LHG KG         L W+ R ++AV AAKGL YLH    P I+HRD+KS+N+L+  D  A +ADF L+    D AA    + + G++GY APEYA T +++ KSDVYSFGVVLLEL+ G+KPV      G   +V W   + +E+++ Q          VD RL G YP            +CV+ EA  RP M  VV  L
Sbjct:  734 FTAEIQTLGRIRHRHIVRLLGYVANKDTNLLLYEYMPNGSLGELLHGSKGGH-------LQWETRHRVAVEAAKGLCYLHHDCSPLILHRDVKSNNILLDSDFEAHVADFGLAKFLVDGAASECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGE-FGEG-VDIVRWV--RNTEEEITQPSDAAIVVAIVDPRLTG-YPLTSVIHVFKIAMMCVEEEAAARPTMREVVHML 967          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 7.060e-40
Identity = 92/243 (37.86%), Postives = 135/243 (55.56%), Query Frame = -1
Query:  129 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPLL 857
            ++F A+V ++ R+ H+N V L+GYC +G    L YE+ +NG L + + G++G      G +L+W  R+KIA+ AA+GLEYLH    P ++HRD+K++N+L+ +    K+ADF LS   P       ST V GT GY  PEY  T  L  KSDVYSFGVVLL ++T +  +D    R ++ +  W    L++  ++   D  L GDY              C+   +  RP MS VV  L+  L
Sbjct:  616 KQFKAEVELLLRVHHKNLVGLVGYCEEGDKLALIYEYMANGDLDEHMSGKRG------GSILNWGTRLKIALEAAQGLEYLHNGCKPLMVHRDVKTTNILLNEHFDTKLADFGLSRSFPIEGETHVSTVVAGTIGYLDPEYYRTNWLTEKSDVYSFGVVLLVMITNQPVIDQN--REKRHIAEWVGGMLTKGDIKSITDPNLLGDYNSGSVWKAVELAMSCMNPSSMTRPTMSQVVFELKECL 850          
The following BLAST results are available for this feature:
BLAST of CF835847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BRL2_ARATH1.423e-4044.55Serine/threonine-protein kinase BRI1-like 2 OS=Ara... [more]
Y4391_ARATH1.858e-4040.17Probable receptor-like protein kinase At4g39110 OS... [more]
Y1755_ARATH3.169e-4040.74Probable LRR receptor-like serine/threonine-protei... [more]
Y1534_ARATH3.169e-4040.17Probable LRR receptor-like serine/threonine-protei... [more]
TMK1_ARATH3.169e-4045.41Probable receptor protein kinase TMK1 OS=Arabidops... [more]
Y2899_ARATH4.139e-4038.89Probable leucine-rich repeat receptor-like protein... [more]
CRK19_ARATH4.139e-4038.82Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
CRK25_ARATH5.406e-4036.95Cysteine-rich receptor-like protein kinase 25 OS=A... [more]
CLV1_ARATH5.406e-4041.06Receptor protein kinase CLAVATA1 OS=Arabidopsis th... [more]
Y5181_ARATH7.060e-4037.86Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02A01_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835847 ID=CF835847; Name=CF835847; organism=Citrus sinensis; type=EST; length=857bp
TTTTTTTTTTTTTTAATAGTTTGCAAGCCTGCATGTGTGCGCATACTTGC
CCACACACAAATGGGGGAGAGAGAGAGTCACTAGCTTGACTAGCTTGCTG
ATTCACCAGCAGGTCCAGGCCGTGCATTTAGCAGGGGCTGGAGGGCTTTG
ACAACAATGCTCATATTTGGACGGAAATCAGCTTCATACTGAACACACAG
AGCAGCAACTGCAGCCATCTTTGCAACTGCCTTGGGAGGATAATCTCCTC
CTAGTCTTGCATCAACGCATTGCCTAACCTTATCTTCACTAAGTTTCGGT
GTGGCCCATGTCACTAGACTCTGCTGTCCACGTGGTAGTGTATGATCGAC
AGGTTTTCGACCTGTCAGAAGCTCAAGCAGAACAACACCAAAGCTGTATA
CATCACTCTTTGCATTCAACTGTCCAGTCATTGCATACTCAGGAGCATGA
TAACCAAAAGTTCCAAGAACACGAGTAGAATGAAGGCGAGCTGCCATATC
AGGAGCTTGATTAGATAAATCAAAGTCGGCAATCTTTGCTACATCATCAT
CAAAAATTAGTACATTGCTGGACTTAATATCGCGATGGATAATATGAGGA
TCTGCCTTCTCATGCAAGTATTCAAGCCCTTTCGCAGCCCCTACAGCAAT
TTTCACTCGCTGTTGCCATGACAAAACAGGACCAGGCTGAGCTCCTTTTA
CACCTTTCCTCCCATGAAGAATATCATGAAGAGATCCATTAGATGCAAAC
TCGTAGGCAAGCACACGGGAAGTCCCATCAACACAATACCCGAGCAGCTG
AACAAAGTTTTCATGCTTCAACCTTGATACCATGGAAACCTGTGCTAAAA
ACTCCTC
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