CF835847

Overview
NameCF835847
Unique NameCF835847
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CF835847_ssr67 microsatellite CF835847_ssr67:67..76. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig2221 contig Csv1_Contig2221:567..1423. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: WAK5_ARATH (Wall-associated receptor kinase 5 OS=Arabidopsis thaliana GN=WAK5 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.576e-39
Identity = 91/242 (37.60%), Postives = 140/242 (57.85%), Query Frame = -1
Query:  132 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPL 857
            E+F+ +V ++S++ H N V+LLG C++    +L YEF S+G+L D LHG      +     L+W+ R++IA+  A  L YLH  A   IIHRD+K++N+L+ ++  AK+ADF  S   P    +L +T V GT GY  PEY  TG LN KSDVYSFGVVL+ELL+G K +    P+  + LV++    + E+++ + +D ++  +Y              C +   + RP+M  V   L+ L
Sbjct:  447 EQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFISSGTLFDHLHG------SMFDSSLTWEHRLRIAIEVAGTLAYLHSYASIPIIHRDVKTANILLDENLTAKVADFGASRLIPMDQEQL-TTMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGEKALCFERPQSSKHLVSYFVSAMKENRLHEIIDGQVMNEYNQREIQESARIAVECTRIMGEERPSMKEVAAELEAL 681          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 161.77 bits (408), Expect = 4.576e-39
Identity = 89/199 (44.72%), Postives = 118/199 (59.30%), Query Frame = -1
Query:  261 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGP-VLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVD 854
            EF A+V  +SR +H N V L G+C     R+L Y +  NGSL   LH R        GP +L W+ R++IA GAAKGL YLHE  DPHI+HRDIKSSN+L+ ++  + +ADF L+         + ST ++GT GY  PEY        K DVYSFGVVLLELLT ++PVD   P+G + L++W      E +  +  D
Sbjct:  774 EFEAEVETLSRAQHPNLVLLRGFCFYKNDRLLIYSYMENGSLDYWLHERND------GPALLKWKTRLRIAQGAAKGLLYLHEGCDPHILHRDIKSSNILLDENFNSHLADFGLARLMSPYETHV-STDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTDKRPVDMCKPKGCRDLISWVVKMKHESRASEVFD 965          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.576e-39
Identity = 90/240 (37.50%), Postives = 139/240 (57.92%), Query Frame = -1
Query:  141 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD-HTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKAL 857
            +EF  + S+V++L+H N V +LG+C++G  ++L YEF  N SL   L   +  K  Q    L W +R KI VG A+G+ YLH  +   IIHRD+K+SN+L+  +   K+ADF ++       +R  + RV+GT GY +PEY M GQ + KSDVYSFGV++LE+++G++  + H      ++LVT+A          + VD+ L  +Y             LCVQ + + RPN+S ++  L
Sbjct:  360 QEFQNETSLVAKLQHRNLVGVLGFCMEGEEKILVYEFVPNKSLDQFLF--EPTKKGQ----LDWAKRYKIIVGTARGILYLHHDSPLKIIHRDLKASNILLDAEMEPKVADFGMARIFRVDQSRADTRRVVGTHGYISPEYLMHGQFSVKSDVYSFGVLVLEIISGKRNSNFHETDESGKNLVTYAWRHWRNGSPLELVDSELEKNYQSNEVFRCIHIALLCVQNDPEQRPNLSTIIMML 593          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.977e-39
Identity = 90/243 (37.04%), Postives = 139/243 (57.20%), Query Frame = -1
Query:  129 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEK-ADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPLL 854
            EF  ++ ++SR++H + V L GYC + +  +L YEF   G+L + L+G          P L+W+QR++I +GAA+GL+YLH   ++  IIHRD+KS+N+L+ + ++AK+ADF LS       + + S  + GTFGY  PEY  T +L  KSDVY+FGVVLLE+L  R  +D  LP  + +L  W     S+  + + +D  L G                C++   D RP+M  V+  L+ +L
Sbjct:  528 EFQTEIQVLSRIRHRHLVSLTGYCEENSEMILVYEFMEKGTLKEHLYGSNL-------PSLTWKQRLEICIGAARGLDYLHSSGSEGAIIHRDVKSTNILLDEHNIAKVADFGLSKIHNQDESNI-SINIKGTFGYLDPEYLQTHKLTEKSDVYAFGVVLLEVLFARPAIDPYLPHEEVNLSEWVMFCKSKGTIDEILDPSLIGQIETNSLKKFMEIAEKCLKEYGDERPSMRDVIWDLEYVL 762          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.806e-39
Identity = 94/246 (38.21%), Postives = 132/246 (53.66%), Query Frame = -1
Query:  117 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPLLNARP 854
            EF+ ++ M+S L+H N V+L G C++G   +L YE+  N SL   L G +  +       L W  R KI +G AKGL YLHE++   I+HRDIK++NVL+     AKI+DF L+    D    + STR+ GT GY APEYAM G L  K+DVYSFGVV LE+++G+   ++        L+ WA     +  + + VD  LG  +             LC       RP MS VV  L+  +  +P
Sbjct:  709 EFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLH-----LDWSTRNKICIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLNDDENTHI-STRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSMLEGKIKVQP 948          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: Y1756_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.806e-39
Identity = 97/243 (39.92%), Postives = 129/243 (53.09%), Query Frame = -1
Query:  129 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPLL 857
            +EF  +V ++ R+ H N V L+GYC +     L Y++  NG L      +K   G+    ++SW  R+ IAV AA GLEYLH    P I+HRD+KSSN+L+ D   AK+ADF LS   P       ST V GTFGY   EY  T +L+ KSDVYSFGVVLLE++T +  +DH   R    +  W    L+   +   +D +L G Y              CV   +  RPNMS VV  L+  L
Sbjct:  609 KEFKTEVELLLRVYHTNLVSLVGYCDEKDHLALIYQYMVNGDL------KKHFSGSS---IISWVDRLNIAVDAASGLEYLHIGCKPLIVHRDVKSSNILLDDQLQAKLADFGLSRSFPIGDESHVSTLVAGTFGYLDHEYYQTNRLSEKSDVYSFGVVLLEIITNKPVIDHN--RDMPHIAEWVKLMLTRGDISNIMDPKLQGVYDSGSAWKALELAMTCVNPSSLKRPNMSHVVHELKECL 840          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: HSL1_ARATH (Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.806e-39
Identity = 95/244 (38.93%), Postives = 140/244 (57.38%), Query Frame = -1
Query:  132 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR--VLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPL 857
            E F A+V  + +++H+N V+L   C     ++L YE+  NGSL D+LH  KG        +L WQ R KI + AA+GL YLH  + P I+HRDIKS+N+LI  D  A++ADF ++ +A D+  +   +   + G+ GY APEYA T ++N KSD+YSFGVV+LE++T ++PVD  L  G++ LV W    L +  +   +D +L   +             LC       RP+M  VVK LQ +
Sbjct:  730 EAFEAEVETLGKIRHKNIVKLWCCCSTRDCKLLVYEYMPNGSLGDLLHSSKG-------GMLGWQTRFKIILDAAEGLSYLHHDSVPPIVHRDIKSNNILIDGDYGARVADFGVA-KAVDLTGKAPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILEIVTRKRPVDPEL--GEKDLVKWVCSTLDQKGIEHVIDPKLDSCF-KEEISKILNVGLLCTSPLPINRPSMRRVVKMLQEI 962          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.806e-39
Identity = 92/238 (38.66%), Postives = 131/238 (55.04%), Query Frame = -1
Query:  138 FLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQ 851
            F  ++ ++  +KH   V L GYC   TS++L Y++   GSL + LH R        G  L W  RV I +GAAKGL YLH    P IIHRDIKSSN+L+  +  A+++DF L+    D  + + +T V GTFGY APEY  +G+   K+DVYSFGV++LE+L+G+ P D +      ++V W    +SE++ ++ VD    G                CV    D RP M  VV+ L+
Sbjct:  345 FERELEILGSIKHRYLVNLRGYCNSPTSKLLLYDYLPGGSLDEALHKR--------GEQLDWDSRVNIIIGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHI-TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKLPTDASFIEKGFNIVGWLNFLISENRAKEIVDLSCEG-VERESLDALLSIATKCVSSSPDERPTMHRVVQLLE 572          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: PAM74_ARATH (Probable LRR receptor-like serine/threonine-protein kinase PAM74 OS=Arabidopsis thaliana GN=PAM74 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.019e-38
Identity = 93/243 (38.27%), Postives = 129/243 (53.09%), Query Frame = -1
Query:  129 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPLL 857
            + F A+V ++ R+ H N V L+GYC +     L YEF   G L   L G+ G      G  ++W  R++IA+ AA GLEYLH    P I+HRDIK++N+L+ +   AK+ADF LS   P       ST V GT GY  PEY  T +L  KSDVYSFG+VLLE++T +  +D +  R +  +  W   +L+   + + +D  L GDY              C    +  RPNMS V   L+  L
Sbjct:  618 KHFKAEVDLLLRVHHTNLVSLVGYCDERDHLALIYEFLPKGDLRQHLSGKSG------GSFINWGNRLRIALEAALGLEYLHSGCTPPIVHRDIKTTNILLDEQLKAKLADFGLSRSFPIGGETHISTVVAGTPGYLDPEYYQTTRLGEKSDVYSFGIVLLEIITNQPVIDQS--RSKSHISQWVGFELTRGDITKIMDPNLNGDYESRSVWRVLELAMSCANPSSVNRPNMSQVANELKECL 852          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 160.229 bits (404), Expect = 1.332e-38
Identity = 99/252 (39.29%), Postives = 141/252 (55.95%), Query Frame = -1
Query:  117 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP-----DMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPLLNARP 857
            +EFL ++ ++SRL H N V LLG+C +   ++L YE+  NG+L D +     VK  +P   L +  R++IA+G+AKG+ YLH +A+P I HRDIK+SN+L+     AK+ADF LS  AP      ++ +  ST V GT GY  PEY +T QL  KSDVYS GVVLLEL TG +P+ H      +++V           +   VD R+    P             C + E D RP+M+ VV+ L+ +    P
Sbjct:  664 KEFLTEIELLSRLHHRNLVSLLGFCDEEGEQMLVYEYMENGTLRDNI----SVKLKEP---LDFAMRLRIALGSAKGILYLHTEANPPIFHRDIKASNILLDSRFTAKVADFGLSRLAPVPDMEGISPQHVSTVVKGTPGYLDPEYFLTHQLTDKSDVYSLGVVLLELFTGMQPITH-----GKNIVREINIAYESGSILSTVDKRM-SSVPDECLEKFATLALRCCREETDARPSMAEVVRELEIIWELMP 902          
The following BLAST results are available for this feature:
BLAST of CF835847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
WAK5_ARATH4.576e-3937.60Wall-associated receptor kinase 5 OS=Arabidopsis t... [more]
PSKR1_ARATH4.576e-3944.72Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
CRK33_ARATH4.576e-3937.50Putative cysteine-rich receptor-like protein kinas... [more]
Y2232_ARATH5.977e-3937.04Probable receptor-like protein kinase At2g23200 OS... [more]
Y5343_ARATH7.806e-3938.21Probable LRR receptor-like serine/threonine-protei... [more]
Y1756_ARATH7.806e-3939.92Probable LRR receptor-like serine/threonine-protei... [more]
HSL1_ARATH7.806e-3938.93Receptor-like protein kinase HSL1 OS=Arabidopsis t... [more]
FEI2_ARATH7.806e-3938.66LRR receptor-like serine/threonine-protein kinase ... [more]
PAM74_ARATH1.019e-3838.27Probable LRR receptor-like serine/threonine-protei... [more]
Y1684_ARATH1.332e-3839.29Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02A01_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835847 ID=CF835847; Name=CF835847; organism=Citrus sinensis; type=EST; length=857bp
TTTTTTTTTTTTTTAATAGTTTGCAAGCCTGCATGTGTGCGCATACTTGC
CCACACACAAATGGGGGAGAGAGAGAGTCACTAGCTTGACTAGCTTGCTG
ATTCACCAGCAGGTCCAGGCCGTGCATTTAGCAGGGGCTGGAGGGCTTTG
ACAACAATGCTCATATTTGGACGGAAATCAGCTTCATACTGAACACACAG
AGCAGCAACTGCAGCCATCTTTGCAACTGCCTTGGGAGGATAATCTCCTC
CTAGTCTTGCATCAACGCATTGCCTAACCTTATCTTCACTAAGTTTCGGT
GTGGCCCATGTCACTAGACTCTGCTGTCCACGTGGTAGTGTATGATCGAC
AGGTTTTCGACCTGTCAGAAGCTCAAGCAGAACAACACCAAAGCTGTATA
CATCACTCTTTGCATTCAACTGTCCAGTCATTGCATACTCAGGAGCATGA
TAACCAAAAGTTCCAAGAACACGAGTAGAATGAAGGCGAGCTGCCATATC
AGGAGCTTGATTAGATAAATCAAAGTCGGCAATCTTTGCTACATCATCAT
CAAAAATTAGTACATTGCTGGACTTAATATCGCGATGGATAATATGAGGA
TCTGCCTTCTCATGCAAGTATTCAAGCCCTTTCGCAGCCCCTACAGCAAT
TTTCACTCGCTGTTGCCATGACAAAACAGGACCAGGCTGAGCTCCTTTTA
CACCTTTCCTCCCATGAAGAATATCATGAAGAGATCCATTAGATGCAAAC
TCGTAGGCAAGCACACGGGAAGTCCCATCAACACAATACCCGAGCAGCTG
AACAAAGTTTTCATGCTTCAACCTTGATACCATGGAAACCTGTGCTAAAA
ACTCCTC
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