CF835860
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: GNO_GLUOX (Gluconate 5-dehydrogenase OS=Gluconobacter oxydans GN=gno PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.547e-22 Identity = 58/172 (33.72%), Postives = 92/172 (53.49%), Query Frame = -3 Query: 240 GKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEKDPRVMEHASRLIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGGYSVN 755 G ++IL+NNAG EF+ +D+ +M+TN + + + Q + G G I+ I SV +A P + Y +TKGA+ LTK +A +WG+ +++N +AP T + + + D E L RTP R G+ E+ FL A+S+V GQV +DGG +V+ Sbjct: 87 GPIDILINNAGIQRRAPLEEFSRKDWDDLMSTNVNAVFFVGQAVARHMIPRGRGKIVNICSVQSELARPGIAPYTATKGAVKNLTKGMATDWGRHGLQINGLAPGYFATEMTERLVADE---EFTDWLCKRTPAGRWGQVEELVGAAVFLSSRASSFVNGQVLMVDGGITVS 255
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: Y4VI_RHISN (Uncharacterized short-chain type dehydrogenase/reductase y4vI OS=Rhizobium sp. (strain NGR234) GN=NGR_a01150 PE=3 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.917e-21 Identity = 61/173 (35.26%), Postives = 95/173 (54.91%), Query Frame = -3 Query: 240 KLNILVNNAGTTIPKEATEFT-MEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEKDPRVMEHASRLIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGGY-SVN 752 ++ +LVNNAG AT T +EDF + N AY ++ L+K I+ ++S+ G++ P S YA++K + +TK+LAC W IRV AVAP +RT ++ +E+ ++ S + R P+ R P+E++ V FL ASY+TG +DGG+ SVN Sbjct: 83 RIEVLVNNAGIGPTMAATADTALEDFQRALAINLVGAYSVACETAKLMKPGAA--IVNVASLAGLLGNPKRSAYAASKAGLISITKSLACRWASRGIRVTAVAPGHVRTPMVAELERAGKL--DVSAIRRRVPLGRIARPDEIARAVRFLASAQASYITGSTLVVDGGWMSVN 251
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: KDUD_ECOLI (2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=Escherichia coli (strain K12) GN=kduD PE=3 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.917e-21 Identity = 62/183 (33.88%), Postives = 99/183 (54.10%), Query Frame = -3 Query: 249 LMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNG----NIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEKDPRVMEHASRLIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGGY 785 L++ +EF G ++ILVNNAG ++A EF+ +D+ +M N +S + +SQ A A GNG NI + S G I VP Y ++K + +T+ +A EW K NI VNA+AP + T+ + D + ++ ++ R P R G P+++ + FL A+ YV G +DGG+ Sbjct: 75 LLDRAVAEF-GHIDILVNNAGLIRREDALEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVP---SYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADE---QRSAEILDRIPAGRWGLPSDLMGPIVFLASSASDYVNGYTIAVDGGW 250
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: DHG2_BACME (Glucose 1-dehydrogenase 2 OS=Bacillus megaterium GN=gdhII PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.810e-21 Identity = 66/179 (36.87%), Postives = 96/179 (53.63%), Query Frame = -3 Query: 252 LMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASG-NGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEKDPRVMEHASRLIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGG 785 L+ET EF G L++++NNAG P + E ++E+++ ++ TN A+ S+ A + GN+I +SSV +I PL YA++KG M +T+ LA E+ IRVN + P I T + DP +IP I G+P E++SV AFL ASYVTG DGG Sbjct: 75 LVETAVKEF-GSLDVMINNAGVENPVPSHELSLENWNQVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAIDTPINAEKFADPEQRADVESMIPMGYI---GKPEEIASVAAFLASSQASYVTGITLFADGG 249
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: Y325_THEMA (Uncharacterized oxidoreductase TM_0325 OS=Thermotoga maritima GN=TM_0325 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.448e-20 Identity = 57/169 (33.73%), Postives = 91/169 (53.85%), Query Frame = -3 Query: 252 GKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRT-SLIDSIEKDPRVMEHASRLIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGG 755 G+L+ILVNNAG E + EDF M N + + LS+ A +K G G I+ +SS G+I +P +Y+ +K A+ LT++LA ++ IRVNAV P ++ L+ ++ P E ++ R P+ R G+ E++ + F A ++TG + IDGG Sbjct: 79 GRLDILVNNAGIVPYGNIEETSEEDFDKTMAVNVKGPFLLSKYAVEQMKKQGGGVIVNVSSEAGLIGIPRRCVYSVSKAALLGLTRSLAVDYVDYGIRVNAVCPGTTQSEGLMARVKASPNPEELLKKMTSRIPMKRLGKEEEIAFAILFAACDEAGFMTGSIINIDGG 247
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: DHG3_BACME (Glucose 1-dehydrogenase 3 OS=Bacillus megaterium GN=gdhIII PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.891e-20 Identity = 64/179 (35.75%), Postives = 97/179 (54.19%), Query Frame = -3 Query: 252 LMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASG-NGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEKDPRVMEHASRLIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGG 785 L++T EF G L++++NNAG P + E ++++++ ++ TN A+ S+ A + GN+I +SSV +I PL YA++KG M Q+T+ LA E+ IRVN + P + T + DP +IP I G+P EV++V AFL ASYVTG DGG Sbjct: 75 LVQTAIKEF-GTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKQMTETLALEYAPKGIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYI---GKPEEVAAVAAFLASSQASYVTGITLFADGG 249
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: FABG_BACSU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Bacillus subtilis GN=fabG PE=3 SV=3) HSP 1 Score: 98.9821 bits (245), Expect = 3.225e-20 Identity = 60/180 (33.33%), Postives = 94/180 (52.22%), Query Frame = -3 Query: 252 QKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEKDPRVMEHASRLIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGG 791 Q +++ S F ++ILVNNAG T +++ ++ N + ++ ++ + +G II +SS+ GV P + Y + K + LTK+ A E NI VNA+AP I T + D + KD + ++ + P+ R GEP++VSSVV FL A Y+TGQ IDGG Sbjct: 70 QNMIKETLSVFS-TIDILVNNAGITRDNLIMRMKEDEWDDVININLKGVFNCTKAVTRQMMKQRSGRIINVSSIVGVSGNPGQANYVAAKAGVIGLTKSSAKELASRNITVNAIAPGFISTDMTDKLAKDVQ-----DEMLKQIPLARFGEPSDVSSVVTFLASEGARYMTGQTLHIDGG 243
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: DHG_BACSU (Glucose 1-dehydrogenase OS=Bacillus subtilis GN=gdh PE=2 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 4.212e-20 Identity = 64/181 (35.36%), Postives = 96/181 (53.04%), Query Frame = -3 Query: 252 QKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASG-NGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEKDPRVMEHASRLIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGG 791 + +++T EF G L+I++NNAG P + E ++D+ ++ TN A+ S+ A + GN+I +SSV VI PL YA++KG + +T+ LA E+ IRVN + P I T + DP+ +IP I GEP E+++V A+L ASYVTG DGG Sbjct: 73 KNIVQTAIKEF-GTLDIMINNAGLENPVPSHEMPLKDWDKVIGTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEVIPWPLFVHYAASKGGIKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPKQKADVESMIPMGYI---GEPEEIAAVAAWLASKEASYVTGITLFADGG 249
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: DHGA_BACME (Glucose 1-dehydrogenase A OS=Bacillus megaterium GN=gdhA PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.502e-20 Identity = 63/179 (35.20%), Postives = 96/179 (53.63%), Query Frame = -3 Query: 252 LMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASG-NGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEKDPRVMEHASRLIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGG 785 L++T EF G L++++NNAG P + E ++++++ ++ TN A+ S+ A + GN+I +SSV +I PL YA++KG M +T+ LA E+ IRVN + P + T + DP +IP I G+P EV++V AFL ASYVTG DGG Sbjct: 75 LVQTAIKEF-GTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTPINAEKFADPEQRADVESMIPMGYI---GKPEEVAAVAAFLASSQASYVTGITLFADGG 249
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: KDUD_DICD3 (2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=Dickeya dadantii (strain 3937) GN=kduD PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.185e-20 Identity = 62/181 (34.25%), Postives = 98/181 (54.14%), Query Frame = -3 Query: 249 LMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQ-LAYPLLKASGNGNIIFISSVTGVI-AVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEKDPRVMEHASRLIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGGY 785 L+E +EF GK++ILVNNAG ++A EF+ +++ +M N +S + +SQ +A +K G II I+S+ +P+ S AS K M +T+ +A EW K NI VNA+AP + T+ + D + + ++ R P R G P ++ FL A+ YV G +DGG+ Sbjct: 75 LVEKAVAEF-GKVDILVNNAGIIRREDAIEFSEKNWDDVMNLNIKSVFFMSQTVARQFIKQGHGGKIINIASMLSFQGGIPVPSYTASKKRVMG-ITRIVANEWAKHNINVNAIAPGYMATNNTQHVRAD---QDRSKEILDRIPAGRWGLPQDLQGPAVFLASSASDYVNGYTIAVDGGW 250 The following BLAST results are available for this feature:
BLAST of CF835860 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 215
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835860 ID=CF835860; Name=CF835860; organism=Citrus sinensis; type=EST; length=796bpback to top |