CF835860

Overview
NameCF835860
Unique NameCF835860
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length796
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: BUTA_STAAR (Acetoin(diacetyl) reductase OS=Staphylococcus aureus (strain MRSA252) GN=butA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.025e-14
Identity = 57/177 (32.20%), Postives = 84/177 (47.46%), Query Frame = -3
Query:  252 GKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGN-IIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEKDPRVMEHASR--------LIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGG 755
            G  +++VNNAG          T E F T+   N        Q A+   K   +G  II  +S  GV   P  S+Y STK A+  LT+  A +   + I VNA AP I++T +++SI       E A +           +  + R  +P +VS+VV+FL    + Y+TGQ   +DGG
Sbjct:   80 GDFHVMVNNAGLGPTTPIDTITEEQFKTVYGVNVAGVLWGIQAAHEQFKKFNHGGKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIA--VATAEEAGKPEAWGWEQFTSQIALGRVSQPEDVSNVVSFLAGKDSDYITGQTIIVDGG 254          
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: BUTA_STAAN (Acetoin(diacetyl) reductase OS=Staphylococcus aureus (strain N315) GN=butA PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.025e-14
Identity = 57/177 (32.20%), Postives = 84/177 (47.46%), Query Frame = -3
Query:  252 GKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGN-IIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEKDPRVMEHASR--------LIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGG 755
            G  +++VNNAG          T E F T+   N        Q A+   K   +G  II  +S  GV   P  S+Y STK A+  LT+  A +   + I VNA AP I++T +++SI       E A +           +  + R  +P +VS+VV+FL    + Y+TGQ   +DGG
Sbjct:   80 GDFHVMVNNAGLGPTTPIDTITEEQFKTVYGVNVAGVLWGIQAAHEQFKKFNHGGKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIA--VATAEEAGKPEAWGWEQFTSQIALGRVSQPEDVSNVVSFLAGKDSDYITGQTIIVDGG 254          
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: BUTA_STAAM (Acetoin(diacetyl) reductase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=butA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.025e-14
Identity = 57/177 (32.20%), Postives = 84/177 (47.46%), Query Frame = -3
Query:  252 GKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGN-IIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEKDPRVMEHASR--------LIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGG 755
            G  +++VNNAG          T E F T+   N        Q A+   K   +G  II  +S  GV   P  S+Y STK A+  LT+  A +   + I VNA AP I++T +++SI       E A +           +  + R  +P +VS+VV+FL    + Y+TGQ   +DGG
Sbjct:   80 GDFHVMVNNAGLGPTTPIDTITEEQFKTVYGVNVAGVLWGIQAAHEQFKKFNHGGKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIA--VATAEEAGKPEAWGWEQFTSQIALGRVSQPEDVSNVVSFLAGKDSDYITGQTIIVDGG 254          
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: BUTA_STAAC (Acetoin(diacetyl) reductase OS=Staphylococcus aureus (strain COL) GN=butA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.025e-14
Identity = 57/177 (32.20%), Postives = 84/177 (47.46%), Query Frame = -3
Query:  252 GKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGN-IIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEKDPRVMEHASR--------LIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGG 755
            G  +++VNNAG          T E F T+   N        Q A+   K   +G  II  +S  GV   P  S+Y STK A+  LT+  A +   + I VNA AP I++T +++SI       E A +           +  + R  +P +VS+VV+FL    + Y+TGQ   +DGG
Sbjct:   80 GDFHVMVNNAGLGPTTPIDTITEEQFKTVYGVNVAGVLWGIQAAHEQFKKFNHGGKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIA--VATAEEAGKPEAWGWEQFTSQIALGRVSQPEDVSNVVSFLAGKDSDYITGQTIIVDGG 254          
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: T4HR_MAGGR (Tetrahydroxynaphthalene reductase OS=Magnaporthe grisea GN=MGG_02252 PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.645e-14
Identity = 54/179 (30.17%), Postives = 92/179 (51.40%), Query Frame = -3
Query:  252 GKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVI-AVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEKD----------PRVMEHASRLIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGG 755
            GKL+I+ +N+G        + T E+F  + T N    + +++ AY  L+  G   +I + S+TG   AVP  ++Y+ +KGA+    + +A +     I VN VAP  I+T +  ++ ++            V E+A+     +P+ R G P +++ VV FL      +VTG+V  IDGG
Sbjct:  106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGR--LILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAS--AWSPLHRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGG 280          
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: DECR2_RAT (Peroxisomal 2,4-dienoyl-CoA reductase OS=Rattus norvegicus GN=Decr2 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.645e-14
Identity = 52/170 (30.59%), Postives = 87/170 (51.18%), Query Frame = -3
Query:  252 GKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEK--DPRVMEHASRLIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGG 755
            GK++IL+N A       A+  +   F T++  +    +++S++ Y        G I+ I++   +    L     + K A++ +T++LA EWG  NIRVN++AP  I  S  + + +   P+       L   +PIPR G   E++  V +L  P ASYV+G V  +DGG
Sbjct:  105 GKIDILINCAAGNFLCPASALSFNAFKTVVDIDTLGTFNVSRVLYEKFFRDHGGVIVNITATLSMRGQVLQLHAGAAKAAVDAMTRHLAVEWGPQNIRVNSLAPGAI--SGTEGLRRLGGPKASSKFKYL--SSPIPRLGTKTEIAHSVLYLASPLASYVSGIVLVVDGG 270          
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: PHBB_RALEH (Acetoacetyl-CoA reductase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=phbB PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.454e-14
Identity = 47/168 (27.98%), Postives = 86/168 (51.19%), Query Frame = -3
Query:  252 GKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEKDPRVMEHASRLIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGG 755
            G++++L+NNAG T      + T  D+  ++ TN  S +++++     +   G G I+ ISSV G       + Y++ K  ++  T  LA E     + VN V+P  I T ++ +I +D        +++   P+ R G P E++S+ A+L    + + TG  F ++GG
Sbjct:   80 GEVDVLINNAGITRDVVFRKMTRADWDAVIDTNLTSLFNVTKQVIDGMADRGWGRIVNISSVNGQKGQFGQTNYSTAKAGLHGFTMALAQEVATKGVTVNTVSPGYIATDMVKAIRQDV-----LDKIVATIPVKRLGLPEEIASICAWLSSEESGFSTGADFSLNGG 242          
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: MTDH_ALTAL (Probable NADP-dependent mannitol dehydrogenase OS=Alternaria alternata PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 3.454e-14
Identity = 52/185 (28.11%), Postives = 93/185 (50.27%), Query Frame = -3
Query:  243 QKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIA--VPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEKDPRVMEHASRLIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGGYSV 791
            +KL++ V  +F GK+++ + NAG T      + T+E ++ ++ T+    ++ ++      +    G+++  SS++G IA      + Y   K     L K+LA EW +D  RVN+++P  I T L D + +D + + H+       P+ R  +  E+     +    A+SY TG    IDGGY V
Sbjct:   88 EKLVQDVIKDF-GKVDVFIANAGKTADNGILDATVEQWNEVIQTDLTGTFNCARAVGLHFRERKTGSLVITSSMSGHIANFPQEQASYNVAKAGCIHLAKSLANEW-RDFARVNSISPGYIDTGLSDFVPQDIQKLWHS-----MIPMGRDAKATELKGAYVYFASDASSYCTGSDLLIDGGYCV 265          
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: CBR4_XENLA (Carbonyl reductase family member 4 OS=Xenopus laevis GN=cbr4 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.454e-14
Identity = 54/172 (31.40%), Postives = 84/172 (48.84%), Query Frame = -3
Query:  240 GKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEKDPRVMEHASRLIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGGYSVN 755
            G ++ LVN+AG +          ED  ++++ N        ++A   +     G+I+ I S+ G       SIY ++K  +   +K+LA E  K NIRVN VAP  IRT +   +++D         L    P+ R GEP EV+  V FL    + Y+TG V  +DGG  ++
Sbjct:   74 GNIDYLVNSAGISRDALLLRTRSEDIMSLLSINLVGTIQTCKVALKGMIQQQGGSIVNIGSIVGHKGNIGQSIYGASKEGLIGFSKSLAKEVAKRNIRVNVVAPGFIRTDMTSDLKED--------SLNKMIPLGRFGEPEEVAQSVLFLL--ESPYITGHVLVVDGGLQLH 235          
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: YJGI_ECOLI (Uncharacterized oxidoreductase yjgI OS=Escherichia coli (strain K12) GN=yjgI PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 4.511e-14
Identity = 57/170 (33.53%), Postives = 83/170 (48.82%), Query Frame = -3
Query:  249 GKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGV-IAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEKDPRVMEHASRLIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGGY 755
            G L+ILV NAG  +  EA E   +D   +   N  + YH S  A   +   G   I+ I SV G  + V   + YA++K A+  + + LA ++G   I +N V P  I T      + +P        L     I R G+P EV+ +VA+L  P AS+VTG +  IDG +
Sbjct:   74 GALDILVVNAGIGVFGEALELNADDIDRLFKINIHAPYHASVEAARQMPEGGR--ILIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDT------DANPANGPMRDMLHSLMAIKRHGQPEEVAGMVAWLAGPEASFVTGAMHTIDGAF 235          
The following BLAST results are available for this feature:
BLAST of CF835860 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
BUTA_STAAR2.025e-1432.20Acetoin(diacetyl) reductase OS=Staphylococcus aure... [more]
BUTA_STAAN2.025e-1432.20Acetoin(diacetyl) reductase OS=Staphylococcus aure... [more]
BUTA_STAAM2.025e-1432.20Acetoin(diacetyl) reductase OS=Staphylococcus aure... [more]
BUTA_STAAC2.025e-1432.20Acetoin(diacetyl) reductase OS=Staphylococcus aure... [more]
T4HR_MAGGR2.645e-1430.17Tetrahydroxynaphthalene reductase OS=Magnaporthe g... [more]
DECR2_RAT2.645e-1430.59Peroxisomal 2,4-dienoyl-CoA reductase OS=Rattus no... [more]
PHBB_RALEH3.454e-1427.98Acetoacetyl-CoA reductase OS=Ralstonia eutropha (s... [more]
MTDH_ALTAL3.454e-1428.11Probable NADP-dependent mannitol dehydrogenase OS=... [more]
CBR4_XENLA3.454e-1431.40Carbonyl reductase family member 4 OS=Xenopus laev... [more]
YJGI_ECOLI4.511e-1433.53Uncharacterized oxidoreductase yjgI OS=Escherichia... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02A11_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835860 ID=CF835860; Name=CF835860; organism=Citrus sinensis; type=EST; length=796bp
TTTTTTTTTTTTTTTTTCTTTTAAATTCGAAATTTATCATTCAACATTAG
ATGAAAAGATATAAAATATTCAGGGACAATGGGTGACAACATAGACAAAT
AAATTGTATAGCACACAAACTTTTTCTCGTTAACAGAGAGCTTATTAGAA
TGGCATCCATAACATGAAGACCTAAACTGACTTTGGAGGAACAGCCAGAA
AATTTAAAAGATCATTTCATGTCCGTAGGGCTAAAATCCATTCACGGAGT
ATCCTCCATCAATACAAAAAACCTGTCCGGTGACGTATGAAGCGGCTGGC
AAACATAGGAATGCTACCACTGACGAAACCTCATTAGGTTCTCCTGGACG
AGGTATAGGAGTACGGGGTATCAAACGACTAGCGTGTTCCATGACCCTTG
GATCCTTTTCTATGGAATCAATGAGAGAGGTTCTAATGATCCATGGAGCA
ACTGCATTCACGCGAATGTTGTCCTTTCCCCACTCACATGCCAAGTTCTT
TGTCAGTTGATTCATTGCTCCTTTAGTTGATGCATAGATGGAACATAGAG
GTACAGCTATAACACCCGTGACAGAGGAGATAAAAATGATGTTTCCATTT
CCTGATGCTTTGAGTAGGGGGTATGCAAGTTGGGACAGGTGGTAAGCAGA
CTCGAAATTGGTGGTCATTATAGTCGAGAAATCCTCCATGGTAAATTCTG
TGGCTTCCTTAGGAATGGTGGTTCCAGCATTGTTTACAAGGATGTTGAGC
TTGCCATCAAATTCAGAACATACAGTCTCCATCAACTTTTGACGCT
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