CF835860
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: UCPA_ECO57 (Oxidoreductase ucpA OS=Escherichia coli O157:H7 GN=ucpA PE=3 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 1.226e-19 Identity = 61/175 (34.86%), Postives = 99/175 (56.57%), Query Frame = -3 Query: 252 EFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTG-VIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSI--EKDPRVMEHA-SRLIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGG 764 E +G+++ILVNNAG + + +D + N + +++++ P + A +G I+ +SSVTG ++A P + YA TK A+ LTK+LA E+ + IRVNA+ P +RT + +SI + +P E + + P+ R +P EV + AFL +SY+TG IDGG Sbjct: 78 EKEGRIDILVNNAGVCRLGSFLDMSDDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLASDESSYLTGTQNVIDGG 252
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: HSD_MYCTU (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Mycobacterium tuberculosis GN=fabG3 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.226e-19 Identity = 58/177 (32.77%), Postives = 94/177 (53.11%), Query Frame = -3 Query: 252 METVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEKDPRVMEHASRLIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGG 782 ++T + F G L++LVNNAG ++ + ++ I+ N + + +K +G G+II ISS+ G+ C Y +TK A+ LTK+ A E G IRVN++ P +++T + D + +D I +T + R EP EVS++V +L +SY TG F +DGG Sbjct: 72 VDTAVTAFGG-LHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED----------IFQTALGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGG 237
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: HSD_MYCBO (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Mycobacterium bovis GN=fabG3 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.226e-19 Identity = 58/177 (32.77%), Postives = 94/177 (53.11%), Query Frame = -3 Query: 252 METVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEKDPRVMEHASRLIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGG 782 ++T + F G L++LVNNAG ++ + ++ I+ N + + +K +G G+II ISS+ G+ C Y +TK A+ LTK+ A E G IRVN++ P +++T + D + +D I +T + R EP EVS++V +L +SY TG F +DGG Sbjct: 72 VDTAVTAFGG-LHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED----------IFQTALGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGG 237
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: FABG_VIBCH (3-oxoacyl-[acyl-carrier-protein] reductase OS=Vibrio cholerae GN=fabG PE=3 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 1.226e-19 Identity = 58/180 (32.22%), Postives = 93/180 (51.67%), Query Frame = -3 Query: 252 QKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEKDPRVMEHASRLIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGG 791 + +++ + EF G ++ILVNNAG T E++S IM TN S + LS+ + G II + SV G + + YA+ K + TK++A E + VN VAP I T + ++ + R + + + P R G+P E++S VAFL P A+Y+TG+ ++GG Sbjct: 67 EAVLKAITDEFGG-VDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQR-----TATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVNGG 240
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: DHG_BACME (Glucose 1-dehydrogenase OS=Bacillus megaterium PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.226e-19 Identity = 63/179 (35.20%), Postives = 94/179 (52.51%), Query Frame = -3 Query: 252 LMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASG-NGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEKDPRVMEHASRLIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGG 785 L+++ EF GKL++++NNAG P + E ++ D++ ++ TN A+ S+ A + G +I +SSV I PL YA++KG M +T+ LA E+ IRVN + P I T + DP +IP I GEP E+++V A+L ASYVTG DGG Sbjct: 75 LVQSAIKEF-GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYI---GEPEEIAAVAAWLASSEASYVTGITLFADGG 249
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: DHG4_BACME (Glucose 1-dehydrogenase 4 OS=Bacillus megaterium GN=gdhIV PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.226e-19 Identity = 63/179 (35.20%), Postives = 96/179 (53.63%), Query Frame = -3 Query: 252 LMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASG-NGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEKDPRVMEHASRLIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGG 785 L++T EF G L++++NNAG P + E ++++++ ++ TN A+ S+ A + GN+I +SSV +I PL YA++KG M +T+ LA E+ IRVN + P + T + DP +IP I G+P EV++V AFL ASYVTG DGG Sbjct: 75 LVQTAIKEF-GTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYI---GKPEEVAAVAAFLASSQASYVTGITLFADGG 249
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: Y4LA_RHISN (Uncharacterized short-chain type dehydrogenase/reductase y4lA OS=Rhizobium sp. (strain NGR234) GN=NGR_a02730 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.601e-19 Identity = 66/182 (36.26%), Postives = 95/182 (52.20%), Query Frame = -3 Query: 252 LMETVCSEFDGKLNILVNNAG----TTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEKDPRVMEHASRLIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGG 785 L ET F G +++LVNNA T + + + + M TN + A P + A G G I+ +SS G+ + YA +K AMN L+ +LA ++G IR NAVAP +I T + + D + H SR +PR G P +V+++VAFL AS++TGQV CIDGG Sbjct: 73 LFETAERHFGG-VDLLVNNASAMHLTPRDRAILDLDLAVWDQTMATNLRGTLLCCRQAIPRMIARGGGAIVNMSSCQGLSGDTAQTSYAVSKAAMNMLSASLATQYGHAQIRCNAVAPGLIMTERL-LAKLDKCMQRHLSR---HQLLPRVGHPEDVAALVAFLLSDDASFITGQVVCIDGG 249
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: Y2146_BRAJA (Probable short-chain type dehydrogenase/reductase blr2146 OS=Bradyrhizobium japonicum GN=blr2146 PE=3 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.601e-19 Identity = 65/182 (35.71%), Postives = 95/182 (52.20%), Query Frame = -3 Query: 252 LMETVCSEFDGKLNILVNNAG----TTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEKDPRVMEHASRLIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGG 785 L ET F G +++LVNNA T + E + + M TN + A P + A G G I+ +SS G+ + YA++K AMN L+ +LA ++G IR NAVAP +I T + + D + H R +PR G P +V+++VAFL A+++TGQV CIDGG Sbjct: 73 LFETAERHFGG-VDLLVNNASAMHLTPRDRAILELELAVWDQTMATNLRGTLLCCRQAIPRMIARGGGAIVNMSSCQGLSGDTALTSYAASKAAMNMLSSSLATQYGHAQIRCNAVAPGLIMTERL-LAKLDACMQTHLRR---HQLLPRVGRPEDVAALVAFLLSDDAAFITGQVVCIDGG 249
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: UCPA_ECOLI (Oxidoreductase ucpA OS=Escherichia coli (strain K12) GN=ucpA PE=1 SV=3) HSP 1 Score: 96.6709 bits (239), Expect = 1.601e-19 Identity = 61/175 (34.86%), Postives = 99/175 (56.57%), Query Frame = -3 Query: 252 EFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTG-VIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSI--EKDPRVMEHA-SRLIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGG 764 E +G+++ILVNNAG + + +D + N + +++++ P + A +G I+ +SSVTG ++A P + YA TK A+ LTK+LA E+ + IRVNA+ P +RT + +SI + +P E + + P+ R +P EV + AFL +SY+TG IDGG Sbjct: 78 EKEGRIDILVNNAGVCRLGSFLDMSDDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPMRRLADPLEVGELAAFLASDESSYLTGTQNVIDGG 252
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: FABG1_SYNY3 (3-oxoacyl-[acyl-carrier-protein] reductase 1 OS=Synechocystis sp. (strain PCC 6803) GN=fabG1 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.091e-19 Identity = 56/180 (31.11%), Postives = 96/180 (53.33%), Query Frame = -3 Query: 252 KLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEKDPRVMEHASRLIPRTPIPRPGEPNEVSSVVAFLCL-PAASYVTGQVFCIDGG 788 +L++T +F ++++LVNNAG T +ED+ ++ N + ++ L+ +G II I+SV G++ P + Y++ K + TK +A E + VNAVAP I T + +++ +P ++ P+ R G+P EV+ + FL PAA+Y+TGQ F +DGG Sbjct: 73 QLIKTTLDKFS-RIDVLVNNAGITRDTLLLRMKLEDWQAVIDLNLTGVFLCTKAVSKLMLKQKSGRIINITSVAGMMGNPGQANYSAAKAGVIGFTKTVAKELASRGVTVNAVAPGFIATDMTENLNAEP--------ILQFIPLARYGQPEEVAGTIRFLATDPAAAYITGQTFNVDGG 243 The following BLAST results are available for this feature:
BLAST of CF835860 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 215
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835860 ID=CF835860; Name=CF835860; organism=Citrus sinensis; type=EST; length=796bpback to top |