CF835860
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: DECR2_ARATH (Peroxisomal 2,4-dienoyl-CoA reductase OS=Arabidopsis thaliana GN=At3g12800 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.097e-11 Identity = 55/189 (29.10%), Postives = 92/189 (48.68%), Query Frame = -3 Query: 252 QKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLK--------ASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKD-NIRVNAVAPWIIRTSLIDSIEKDPRVMEHASRLIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGG 791 ++++E F GKL+ILVN A A + + F T++ + +++ A LK +SG G+II IS+ A ++ K A++ T+NLA EWG D +IRVN +AP I + S + P +E+ +R P+ + GE +++ +L + YV+G +DGG Sbjct: 77 RRVVEATFQHF-GKLDILVNAAAGNFLAAAEDLSPNGFRTVLDIDAVGTFNMCHAALKYLKKGAPGRDSSSGGGSIINISATLHYTASWYQIHVSAAKAAVDATTRNLALEWGTDYDIRVNGIAPGPIGGTPGMS-KLVPEEIENKTR--EYMPLYKVGEKWDIAMAALYLSCDSGKYVSGLTMVVDGG 261
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: YGHA_ECOLI (Uncharacterized oxidoreductase yghA OS=Escherichia coli (strain K12) GN=yghA PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.963e-11 Identity = 53/169 (31.36%), Postives = 82/169 (48.52%), Query Frame = -3 Query: 252 GKLNILVNNAGTTIP-KEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEKDPRVMEHASRLIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGG 755 G L+I+ AG + + + T E F N + + L+Q A PLL + II SS+ P YA+TK A+ ++ LA + + IRVN VAP I T+L S + + + +TP+ R G+P E++ V +L +SYVT +V + GG Sbjct: 127 GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGAS--IITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQIS---GGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCGG 290
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: YGHA_ECO57 (Uncharacterized oxidoreductase yghA OS=Escherichia coli O157:H7 GN=yghA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.963e-11 Identity = 53/169 (31.36%), Postives = 82/169 (48.52%), Query Frame = -3 Query: 252 GKLNILVNNAGTTIP-KEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEKDPRVMEHASRLIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGG 755 G L+I+ AG + + + T E F N + + L+Q A PLL + II SS+ P YA+TK A+ ++ LA + + IRVN VAP I T+L S + + + +TP+ R G+P E++ V +L +SYVT +V + GG Sbjct: 127 GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGAS--IITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQIS---GGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCGG 290
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: DHB8_CALJA (Estradiol 17-beta-dehydrogenase 8 (Fragment) OS=Callithrix jacchus GN=HSD17B8 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.963e-11 Identity = 44/137 (32.12%), Postives = 75/137 (54.74%), Query Frame = -3 Query: 276 DFSTIMTTNFESAYHLSQLAYPLLKASG-NGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEKDPRVMEHASRLIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTG 683 D+ ++ N + + ++Q A L +SG +G+II ISS+ G + + YA++K + LT+ A E G+ IR N+V P I T + + + +VM + +IP + G+P +V+ VVAFL + Y+TG Sbjct: 1 DWDKVIAVNLKGTFLVTQAAGQALVSSGCSGSIINISSIVGKVGNMGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQ--KVMNKITGMIPMGHL---GDPEDVADVVAFLASEDSGYITG 132
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: CBR4_RAT (Carbonyl reductase family member 4 OS=Rattus norvegicus GN=Cbr4 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.963e-11 Identity = 52/168 (30.95%), Postives = 80/168 (47.62%), Query Frame = -3 Query: 252 GKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEKDPRVMEHASRLIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGG 755 G +N LVN AG ED + + TN + A + G G+I+ + S+ G+ + Y++TKG + +++LA E + IRVN VAP I T + +++ EH + I P+ R GE EV+ V FL + Y+TG V +DGG Sbjct: 75 GPVNFLVNAAGINRDSLLVRTKTEDMLSQLHTNLLGTMLTCRAAMRTMIQQG-GSIVNVGSIIGLKGNVGQAAYSATKGGLIGFSRSLAKEVARKKIRVNVVAPGFIHTDMTKHLKE-----EHFKKNI---PLGRFGEALEVAHAVVFLL--ESPYITGHVLIVDGG 231 The following BLAST results are available for this feature:
BLAST of CF835860 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 215
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835860 ID=CF835860; Name=CF835860; organism=Citrus sinensis; type=EST; length=796bpback to top |