CF835860
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: FABG_CUPLA (3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic OS=Cuphea lanceolata GN=CLKR27 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.566e-19 Identity = 58/172 (33.72%), Postives = 90/172 (52.33%), Query Frame = -3 Query: 243 GKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEKDPRVMEHASRLIPRTPIPRPGEPNEVSSVVAFLCL-PAASYVTGQVFCIDGGYSV 755 G ++ILVNNAG T + ++ N + +Q A ++ G II I+SV G++ + Y++ K + TK +A E+ NI VNAVAP I + + + D +++ P+ R G+P EV+ +V FL + PA+SYVTGQVF IDGG ++ Sbjct: 154 GTVDILVNNAGITRDGLLMRMKKSQWQEVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNAGQANYSAAKAGVIGFTKTVAREYASRNINVNAVAPGFISSDMTSKLGDDIN-----KKILETIPLGRYGQPEEVAGLVEFLAINPASSYVTGQVFTIDGGMTM 320
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: UCPA_SALTY (Oxidoreductase ucpA OS=Salmonella typhimurium GN=ucpA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.657e-19 Identity = 60/177 (33.90%), Postives = 98/177 (55.37%), Query Frame = -3 Query: 252 EFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTG-VIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEK-----DPRVMEHASRLIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGG 764 E +G+++ILVNNAG + + ED + N + +++++ P + +G I+ +SSVTG ++A P + YA +K A+ LTK+LA E+ + IRVNA+ P +RT + +SI + DP + + + P+ R +P EV + AFL +SY+TG IDGG Sbjct: 78 ETEGRIDILVNNAGVCRLGNFLDMSEEDRDFHIDINIKGVWNVTKAVLPEMIKRKDGRIVMMSSVTGDMVADPGETAYALSKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPDDPESV--LTEMAKAIPLRRLADPLEVGELAAFLASDESSYLTGTQNVIDGG 252
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: UCPA_SALTI (Oxidoreductase ucpA OS=Salmonella typhi GN=ucpA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.657e-19 Identity = 60/177 (33.90%), Postives = 98/177 (55.37%), Query Frame = -3 Query: 252 EFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTG-VIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEK-----DPRVMEHASRLIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGG 764 E +G+++ILVNNAG + + ED + N + +++++ P + +G I+ +SSVTG ++A P + YA +K A+ LTK+LA E+ + IRVNA+ P +RT + +SI + DP + + + P+ R +P EV + AFL +SY+TG IDGG Sbjct: 78 ETEGRIDILVNNAGVCRLGNFLDMSEEDRDFHIDINIKGVWNVTKAVLPEMIKRKDGRIVMMSSVTGDMVADPGETAYALSKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPDDPESV--LTEMAKAIPLRRLADPLEVGELAAFLASDESSYLTGTQNVIDGG 252
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: FABG_CHLTR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia trachomatis GN=fabG PE=1 SV=3) HSP 1 Score: 94.7449 bits (234), Expect = 6.083e-19 Identity = 57/167 (34.13%), Postives = 93/167 (55.69%), Query Frame = -3 Query: 252 LNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHL-SQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEKDPRVMEHASRLIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGG 749 ++++VNNAG T + E++S+++ TN S Y++ S + P++KA +G II ISS+ G+ P + YA+ K + +K L+ E G NIRVN +AP I T + S+ + + + + P+ R G P E++ FL +SY+TGQV +DGG Sbjct: 86 IDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIYNVCSAVIRPMIKAR-SGAIINISSIVGLRGSPGQTNYAAAKAGIIGFSKALSKEVGSKNIRVNCIAPGFIDTDMTKSLNDNLK-----NEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITGQVLSVDGG 246
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: FIXR_BRAJA (Protein fixR OS=Bradyrhizobium japonicum GN=fixR PE=3 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 7.944e-19 Identity = 65/175 (37.14%), Postives = 97/175 (55.43%), Query Frame = -3 Query: 252 LNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASG--------NGNIIFISSVTGVIAVPLC-SIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEKDPRVMEHASRLIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGG 749 L+ LVNNAG + PK T M +T T + +HL+ +A P+L A G +G+I+ ++S+ G P S YA++K A+ LT+ LA ++ IRVNA+AP IRT ++ + +R++ P+ R G P+EV+ V+ FLC AASYVTG I+GG Sbjct: 112 LHALVNNAGVS-PKTPTGDRMTSLTT-STDTWMRVFHLNLVA-PILLAQGLFDELRAASGSIVNVTSIAGSRVHPFAGSAYATSKAALASLTRELAHDYAPHGIRVNAIAPGEIRTDMLSP--------DAEARVVASIPLRRVGTPDEVAKVIFFLCSDAASYVTGAEVPINGG 275
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: GS39_BACSU (General stress protein 39 OS=Bacillus subtilis GN=ydaD PE=1 SV=3) HSP 1 Score: 93.9745 bits (232), Expect = 1.038e-18 Identity = 64/169 (37.87%), Postives = 87/169 (51.48%), Query Frame = -3 Query: 252 GKLNILVNNAGTTIPKEAT-EFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEKDPRVMEHASRLIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGG 755 G L+ILVNNAG PKE+ + T E TNF S ++L++ A LK II +S+ + P Y +TKGA+N T+ +A KD IRVNAVAP I T LI + + V + TP+ RPG+P E L +SY+TGQ ++GG Sbjct: 119 GGLDILVNNAGEQHPKESIKDITSEQLHRTFKTNFYSQFYLTKKAIDYLKPGSA--IINTTSINPYVGNPTLIDYTATKGAINAFTRTMAQALVKDGIRVNAVAPGPIWTPLIPATFPEETVAQFGQ----DTPMGRPGQPVEHVGCYVLLASDESSYMTGQTLHVNGG 281
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: NODG_AZOBR (Nodulation protein G OS=Azospirillum brasilense GN=nodG PE=3 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.355e-18 Identity = 57/168 (33.93%), Postives = 85/168 (50.60%), Query Frame = -3 Query: 252 GKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEKDPRVMEHASRLIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGG 755 G ++ILVNNAG T K + + ++ TN S ++++Q P + G G II ISSV GV + Y++ K + TK LA E + VNA+AP I T ++ +I +D R + P+ R G P+E+ V++L A YVTG I+GG Sbjct: 80 GPVDILVNNAGITRDKFFAKMDKAQWDAVIATNLSSLFNVTQQVSPKMAERGWGRIINISSVNGVKGQAGQTNYSAAKAGVIGFTKALAAELATKGVTVNAIAPGYIGTDMVMAIREDIR-----QAITDSVPMKRLGRPDEIGGAVSYLASEIAGYVTGSTLNINGG 242
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: FABG_MYCTU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Mycobacterium tuberculosis GN=fabG PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.355e-18 Identity = 57/175 (32.57%), Postives = 92/175 (52.57%), Query Frame = -3 Query: 252 TVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEKDPRVMEHASRLIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGG 776 T E G + +LV+NAG + T E F ++ N A+ ++Q A ++ + G +IFI SV+G + + YA++K + + +++A E K N+ N VAP I T + ++ D R+ + A + I P R G P EV+ VV+FL ASY++G V +DGG Sbjct: 73 TAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL--DERIQQGALQFI---PAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGG 242
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: FABG_MYCBO (3-oxoacyl-[acyl-carrier-protein] reductase OS=Mycobacterium bovis GN=fabG PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.355e-18 Identity = 57/175 (32.57%), Postives = 92/175 (52.57%), Query Frame = -3 Query: 252 TVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEKDPRVMEHASRLIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGG 776 T E G + +LV+NAG + T E F ++ N A+ ++Q A ++ + G +IFI SV+G + + YA++K + + +++A E K N+ N VAP I T + ++ D R+ + A + I P R G P EV+ VV+FL ASY++G V +DGG Sbjct: 73 TAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL--DERIQQGALQFI---PAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGG 242
BLAST of CF835860 vs. ExPASy Swiss-Prot
Match: FABG_CHLMU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia muridarum GN=fabG PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.355e-18 Identity = 56/169 (33.14%), Postives = 93/169 (55.03%), Query Frame = -3 Query: 252 GKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHL-SQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEKDPRVMEHASRLIPRTPIPRPGEPNEVSSVVAFLCLPAASYVTGQVFCIDGG 755 G ++++VNNAG T + E++S+++ TN S Y++ S + P++KA +G I+ ISS+ G+ P + YA+ K + +K L+ E G NIRVN +AP I T + + + + + + P+ R G P E++ FL +SY+TGQV +DGG Sbjct: 84 GTIDVVVNNAGITRDSLLMRMSEEEWSSVIDTNLGSIYNVCSAVIRPMIKAR-SGAIVNISSIVGLRGSPGQTNYAAAKAGIIGFSKALSKEVGSKNIRVNCIAPGFIDTDMTKGLSDNLK-----NEWLKGVPLGRVGTPEEIAMAALFLASNQSSYITGQVLSVDGG 246 The following BLAST results are available for this feature:
BLAST of CF835860 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 215
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835860 ID=CF835860; Name=CF835860; organism=Citrus sinensis; type=EST; length=796bpback to top |