CF835865

Overview
NameCF835865
Unique NameCF835865
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length660
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER2_ARMRU (Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.099e-49
Identity = 100/199 (50.25%), Postives = 135/199 (67.84%), Query Frame = 2
Query:   59 SSLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLS-AKDMVALSXAHTIGQARC 652
            SS ++ L    L++    S AQLS +FY KTCP++ +   + +++A+  + R+ AS+LRLHFHDCFVNGCD SILLD+T+SF  EK +  N  SARGF+V+D +K+ VEK CP  VSCAD+LAIAA+ SV + GGPSW V  GRRDS    +  AN   +P P+STL  L ++F+  GL    D+VALS  HT G+ +C
Sbjct:    4 SSSLIKLGFLLLLLNVSLSHAQLSPSFYDKTCPQVFDIATNTIKTALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNARSARGFDVIDTMKAAVEKACPKTVSCADLLAIAAQKSVVLAGGPSWKVPSGRRDSLRGFMDLANDN-LPGPSSTLQVLKDKFRNVGLDRPSDLVALSGGHTFGKNQC 201          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER17_ARATH (Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.099e-49
Identity = 100/188 (53.19%), Postives = 131/188 (69.68%), Query Frame = 2
Query:   95 VVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARCIA 658
            VV TG++   L   FYS+TCP+  + V+  ++ A+ KE R  AS++R  FHDCFVNGCD S+LLDDT +  GEK S  NI+S R FEVVDDIK  +EK CP  VSCADI+ +AAR +VA+ GGP W VKLGR+DS TAS   ++  ++P P +  + LI+ F+   LS KDMVALS +H+IGQ RC +
Sbjct:   16 VVVTGET---LRPRFYSETCPEAESIVRREMKKAMIKEARSVASVMRFQFHDCFVNGCDASLLLDDTPNMLGEKLSLSNIDSLRSFEVVDDIKEALEKACPATVSCADIVIMAARDAVALTGGPDWEVKLGRKDSLTASQQDSDD-IMPSPRANATFLIDLFERFNLSVKDMVALSGSHSIGQGRCFS 199          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER36_ARATH (Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=2 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 4.047e-49
Identity = 97/181 (53.59%), Postives = 121/181 (66.85%), Query Frame = 2
Query:  113 SSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARCI 655
            S A LS  FY  +CP     V+S V +A   + RM AS+LRLHFHDCFVNGCD S+LLD + +   EK S  N +SARGFEV+D+IKS +E  CP  VSCAD+LA+ AR S+ I GGPSW V LGRRD++ ASL  +    IP P STL  ++  F  +GL   D+VAL  +HTIG +RCI
Sbjct:   37 SVASLSPQFYENSCPNAQAIVQSYVANAYFNDPRMAASILRLHFHDCFVNGCDASVLLDSSGTMESEKRSNANRDSARGFEVIDEIKSALENECPETVSCADLLALVARDSIVICGGPSWEVYLGRRDAREASLIGSMEN-IPSPESTLQTILTMFNFQGLDLTDLVALLGSHTIGNSRCI 216          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER14_ARATH (Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.047e-49
Identity = 97/182 (53.30%), Postives = 119/182 (65.38%), Query Frame = 2
Query:  107 GKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            G +   L  +FY  +CP+    V+S V  A  +E RM ASL+RLHFHDCFV GCDGS+LLD + S   EK S PN  SARGFEVVD+IK+ +E  CP  VSCAD L +AAR S  + GGPSW V LGRRDS TAS A  N   +P P +    +  RF  +GL+  D+VALS +HTIG +RC
Sbjct:   29 GGNKRNLFPDFYRSSCPRAEEIVRSVVAKAFERETRMAASLMRLHFHDCFVQGCDGSLLLDTSGSIVTEKNSNPNSRSARGFEVVDEIKAALENECPNTVSCADALTLAARDSSVLTGGPSWTVPLGRRDSATASRAKPNKD-LPEPDNLFDTIFLRFSNEGLNLTDLVALSGSHTIGFSRC 209          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PERX_TOBAC (Lignin-forming anionic peroxidase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 5.285e-49
Identity = 101/191 (52.88%), Postives = 129/191 (67.54%), Query Frame = 2
Query:   80 ALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            A+ FLV   G S+AQLS  FY  TCP + + V+  +      + R GA ++RLHFHDCFVNGCDGSILLD   + T EK +  N+  A GF++VDDIK+ +E VCPGVVSCADILA+A+   V +  GPSW V  GR+DS TA+ + ANS  IP P  TL+ +I +F  KG+   D+VALS AHT G+ARC
Sbjct:    9 AILFLVAIFGASNAQLSATFYDTTCPNVTSIVRGVMDQRQRTDARAGAKIIRLHFHDCFVNGCDGSILLDTDGTQT-EKDAPANV-GAGGFDIVDDIKTALENVCPGVVSCADILALASEIGVVLAKGPSWQVLFGRKDSLTANRSGANSD-IPSPFETLAVMIPQFTNKGMDLTDLVALSGAHTFGRARC 196          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER11_ARATH (Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 6.903e-49
Identity = 88/176 (50.00%), Postives = 127/176 (72.16%), Query Frame = 2
Query:  125 LSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            L+ ++Y  TCP + + +K  ++  V ++ R  A ++RLHFHDCFV GCDGS+LLD+T +  GEK + PNINS +G+++VD IK+ +E  CPGVVSCAD+L I AR +  ++GGP W+V +GR+DSKTAS   A +  +P P   L ++I +F ++GLS +DMVAL  AHTIG+A+C
Sbjct:   30 LTLDYYKSTCPTVFDVIKKEMECIVKEDPRNAAIIIRLHFHDCFVQGCDGSVLLDETETLQGEKKASPNINSLKGYKIVDRIKNIIESECPGVVSCADLLTIGARDATILVGGPYWDVPVGRKDSKTASYELATTN-LPTPEEGLISIIAKFYSQGLSVEDMVALIGAHTIGKAQC 204          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER34_ARATH (Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=1 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 9.015e-49
Identity = 104/208 (50.00%), Postives = 135/208 (64.90%), Query Frame = 2
Query:   44 MAFSFSSLMVT----LALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLS-AKDMVALSXAHTIGQARC 652
            M FS SS   T    + LG L++    S+AQL+  FY ++CP + N V+  + + +  + R+ AS+LRLHFHDCFVNGCD SILLD+T+SF  EK +  N NSARGF V+D +K+ VE+ CP  VSCAD+L IAA+ SV + GGPSW V LGRRDS  A L  AN+  +P P  TL  L   F+  GL    D+VALS  HT G+ +C
Sbjct:    1 MHFSSSSTSSTWTILITLGCLMLHASLSAAQLTPTFYDRSCPNVTNIVRETIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLELANAN-LPAPFFTLPQLKASFRNVGLDRPSDLVALSGGHTFGKNQC 207          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER20_ARATH (Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.177e-48
Identity = 104/199 (52.26%), Postives = 132/199 (66.33%), Query Frame = 2
Query:   62 SLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARCIA 658
            SL+V  A+   V+  G     L   FY ++CP     VK  ++ AV K+ RM ASLLRL FHDCFV GCD S+LLD       EK + PN+NS RGFEV+D IK  +E+ CP  VSC+DILA+AAR SV + GGP W V LGRRDS  AS A AN   IP P S+L +LI  F+ +GL+ +D++ALS AHTIG+ARC++
Sbjct:   11 SLIVLYAITTSVL--GDFGEPLLKGFYKESCPLAEEIVKHNIEVAVLKDPRMAASLLRLQFHDCFVLGCDASVLLDTHGDMLSEKQATPNLNSLRGFEVIDYIKYLLEEACPLTVSCSDILALAARDSVFLRGGPWWEVLLGRRDSLKASFAGANQ-FIPAPNSSLDSLIINFKQQGLNIQDLIALSGAHTIGKARCVS 206          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER23_ARATH (Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.008e-48
Identity = 102/207 (49.28%), Postives = 136/207 (65.70%), Query Frame = 2
Query:   44 MAFSFS---SLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLS-AKDMVALSXAHTIGQARC 652
            M FS S   S M  L +G L++    S+AQL  +FY +TCP + N +   + + +  + R+ ASLLRLHFHDCFV GCD SILLD+++SF  EK + PN NS RGF+V+D +K+ +E+ CP  VSCADI+ IA++ SV + GGP W V LGRRDS  A  A AN+  +P P STL+ L   F   GL+   D+VALS  HT G+A+C
Sbjct:    1 MGFSSSLSCSAMGALIVGCLLLQASNSNAQLRPDFYFRTCPPIFNIIGDTIVNELRTDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNKNSVRGFDVIDRMKAAIERACPRTVSCADIITIASQISVLLSGGPWWPVPLGRRDSVEAFFALANT-ALPSPFSTLTQLKTAFADVGLNRPSDLVALSGGHTFGKAQC 206          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER1A_ARMRU (Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2)

HSP 1 Score: 191.815 bits (486), Expect = 2.623e-48
Identity = 103/208 (49.52%), Postives = 135/208 (64.90%), Query Frame = 2
Query:   44 MAFSFSSLMVT----LALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLS-AKDMVALSXAHTIGQARC 652
            M FS SS + T    + L  L++    S AQL+  FY  +CP + N V+  + + +  + R+ AS+LRLHFHDCFVNGCD SILLD+T+SF  EK +  N NSARGF V+D +K+ VE  CP  VSCAD+L IAA+ SV + GGPSW V LGRRDS  A L  AN+  +P P  TL  L + F+  GL+ + D+VALS  HT G+ +C
Sbjct:    1 MHFSSSSTLFTCITLIPLVCLILHASLSDAQLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANAN-LPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQC 207          
The following BLAST results are available for this feature:
BLAST of CF835865 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
PER2_ARMRU3.099e-4950.25Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3... [more]
PER17_ARATH3.099e-4953.19Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=... [more]
PER36_ARATH4.047e-4953.59Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=... [more]
PER14_ARATH4.047e-4953.30Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=... [more]
PERX_TOBAC5.285e-4952.88Lignin-forming anionic peroxidase OS=Nicotiana tab... [more]
PER11_ARATH6.903e-4950.00Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=... [more]
PER34_ARATH9.015e-4950.00Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=... [more]
PER20_ARATH1.177e-4852.26Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=... [more]
PER23_ARATH2.008e-4849.28Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=... [more]
PER1A_ARMRU2.623e-4849.52Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02A14_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02A14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835865 ID=CF835865; Name=CF835865; organism=Citrus sinensis; type=EST; length=660bp
CTTCACACTGTTAATTAAATTTAATTAACAAAAGGAGCAAAAAATGGCTT
TTTCTTTTTCTTCTTTAATGGTGACTTTGGCATTAGGGTTTCTTGTGGTT
TTCACAGGCAAATCAAGTGCTCAACTCTCTACTAATTTCTATTCAAAAAC
TTGTCCAAAACTGTTGAATACGGTTAAATCTGCTGTTCAATCAGCAGTTT
CAAAAGAGCGTCGGATGGGCGCTTCTCTCCTTCGCTTACACTTTCATGAC
TGTTTCGTCAACGGGTGTGATGGGTCAATTCTACTAGATGACACGTCATC
TTTCACTGGTGAGAAGACTTCAGGACCAAATATCAATTCAGCAAGAGGAT
TTGAAGTTGTTGATGATATAAAATCAAAGGTAGAGAAAGTTTGCCCAGGA
GTCGTTTCATGCGCTGATATTTTAGCCATTGCTGCTCGGCATTCAGTTGC
AATTCTTGGAGGGCCAAGTTGGAATGTTAAACTTGGAAGAAGGGACTCCA
AAACAGCTAGCTTAGCTGCTGCTAATAGTGGTGTCATTCCTCCTCCTACC
TCCACTCTAAGCAACCTCATCAATAGATTCCAGGCTAAAGGTCTCTCTGC
CAAGGACATGGTTGCTTTATCCNGAGCGCATACAATTGGGCAAGCAAGGT
GTATAGCCTT
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