CF835865

Overview
NameCF835865
Unique NameCF835865
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length660
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER50_ARATH (Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.816e-34
Identity = 81/183 (44.26%), Postives = 112/183 (61.20%), Query Frame = 2
Query:  113 SSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSA-RGFEVVDDIKSKVEKV--CPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            SSAQL  NFY+ +CP +   V++AVQ  V +      + LRL+FHDCFVNGCD S+++  T++   EK    N++ A  GF+ V   K  ++ V  C   VSCADIL +A R  V + GGP ++V+LGR D   +S AA+  G +P PT  ++ L + F   GLS  DM+ALS AHT+G A C
Sbjct:   23 SSAQLRRNFYAGSCPNVEQIVRNAVQKKVQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNNNKAEKDHEENLSLAGDGFDTVIKAKEALDAVPNCRNKVSCADILTMATRDVVNLAGGPQYDVELGRLDG-LSSTAASVGGKLPHPTDDVNKLTSLFAKNGLSLNDMIALSGAHTLGFAHC 204          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER60_ARATH (Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.070e-33
Identity = 83/205 (40.49%), Postives = 114/205 (55.61%), Query Frame = 2
Query:   44 MAFSFSSLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGG--PSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            MA   S++ V +    L+ F      QL   FYS+ C  + N V   V  A  K+  +  +++RL+FHDCF NGCD S+LLD ++S   EK + PN+ S RG+EV+DDIKS VEK C  VVSCADI+A+A R  V +  G    + +  GR D K +S    +   +P P  T++    +F  + LS  DMV L   HTIG   C
Sbjct:    1 MAVKISTIEVLILSLALLSFGHGCYGQLRLGFYSQNCQNVENIVSKVVGEAFIKDSSIAPAMIRLYFHDCFSNGCDASLLLDGSNS---EKKASPNL-SVRGYEVIDDIKSAVEKECDRVVSCADIIALATRDLVTLASGGKTRYEIPTGRLDGKISSALLVD---LPSPKMTVAETAAKFDQRKLSLNDMVLLLGGHTIGVTHC 198          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER35_ARATH (Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.070e-33
Identity = 85/199 (42.71%), Postives = 114/199 (57.29%), Query Frame = 2
Query:   65 LMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSA-RGFEVVDDIKSKVEK--VCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            L++ L L  + VF   ++AQLS  FYSKTCP +   V++AVQ  + K      + LRL FHDCFVNGCD S+++  T     EK    NI+ A  GF+VV   K  ++    C   VSCADIL +A R  V   GGPS+ V+LGR D    S A++  G +P P+  +  L   F    L+ +DM+ALS AHT+G A C
Sbjct:    8 LLIGLCL-IISVFPDTTTAQLSRGFYSKTCPNVEQIVRNAVQKKIKKTFVAVPATLRLFFHDCFVNGCDASVMIQSTPKNKAEKDHPDNISLAGDGFDVVIQAKKALDSNPSCRNKVSCADILTLATRDVVVAAGGPSYEVELGRFDG-LVSTASSVEGNLPGPSDNVDKLNALFTKNKLTQEDMIALSAAHTLGFAHC 204          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER73_ARATH (Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.113e-33
Identity = 82/199 (41.21%), Postives = 117/199 (58.79%), Query Frame = 2
Query:   65 LMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSA-RGFEVVDDIKSKVEKV--CPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            ++VTL+L  + +F   ++AQL TNFY  +CP +   VK  VQ  + +      + LRL FHDCFVNGCD S+++  T +   EK    NI+ A  GF+VV   K  ++ +  C   VSCADILA+A R  V    GPS+ V+LGR D   ++ A+ N G +P P + ++ L   F    L+ +DM+ALS AHT+G A C
Sbjct:    8 VVVTLSLA-ISMFPDTTTAQLKTNFYGNSCPNVEQIVKKVVQEKIKQTFVTIPATLRLFFHDCFVNGCDASVMIQSTPTNKAEKDHPDNISLAGDGFDVVIKAKKALDAIPSCKNKVSCADILALATRDVVVAAKGPSYAVELGRFDGLVSTAASVN-GNLPGPNNKVTELNKLFAKNKLTQEDMIALSAAHTLGFAHC 204          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER70_ARATH (Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.113e-33
Identity = 75/175 (42.86%), Postives = 109/175 (62.29%), Query Frame = 2
Query:  131 TNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARCI 655
            T +Y   C  + + V+S V+S           +LR+HFHDCFV GCD S+LL   +S   E+T+ PN+ S RGF V+++ K+++E  CP  VSCADILA+AAR  V + GGP W V LGR D +   ++ A++ ++P PT +++    RF  K L+ +D+V L+  HTIG A CI
Sbjct:   36 TGYYGSACWNVESIVRSVVESNYLANPANAPGILRMHFHDCFVQGCDASVLLAGPNS---ERTAIPNL-SLRGFNVIEEAKTQLEIACPRTVSCADILALAARDFVHLAGGPWWPVPLGRLDGR---ISLASNVILPGPTDSVAVQKLRFAEKNLNTQDLVVLAAGHTIGTAGCI 203          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER24_ARATH (Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.545e-32
Identity = 79/184 (42.93%), Postives = 104/184 (56.52%), Query Frame = 2
Query:  107 GKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTS-SFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAI-LGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            G+   +L  NFY  +CP   + V+  V   V   R +   LLR+H+HDCFV GCD S+LLD  +     EK + PN+ S  GFE++D+IK  +EK CP  VSCADIL +AAR +V+     P WNV  GR D +  SLA   +  +P   +  + L   F    L   D+VALS AHTIG A C
Sbjct:   40 GRWEGKLKMNFYHNSCPGAEDIVRQIVWKKVEANRSLAPKLLRVHYHDCFVRGCDASLLLDSVAGKAVSEKEARPNL-SLSGFEIIDEIKYILEKRCPNTVSCADILTLAARDAVSYEFERPLWNVFTGRVDGR-VSLATEAARDLPSAGANFTTLQKLFAESDLDVVDLVALSGAHTIGIAHC 221          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER65_ARATH (Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=2 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 5.871e-32
Identity = 81/206 (39.32%), Postives = 113/206 (54.85%), Query Frame = 2
Query:   44 MAFS--FSSLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNIN-SARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            M FS  F+  ++   L  +        A L T++Y KTCP     V+ AV +   ++    A  LRL FHDCF+ GCD S+L+   S    E+    N +     F++V  IK+ +E  CPGVVSCADILA A R  V ++GGP ++VKLGR+D    S A    G +P    T+ ++   F+  G S ++MVALS AHTIG + C
Sbjct:    4 MQFSRGFNPFVILFCLAVVAPIISADVAILRTDYYQKTCPDFHKIVREAVTTKQVQQPTTAAGTLRLFFHDCFLEGCDASVLIATNSFNKAERDDDLNDSLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPYFDVKLGRKDG-FESKAHKVRGNVPMANQTVPDIHGIFKKNGFSLREMVALSGAHTIGFSHC 208          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER8_ARATH (Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 7.667e-32
Identity = 74/179 (41.34%), Postives = 105/179 (58.66%), Query Frame = 2
Query:  119 AQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVAL-SXAHTIGQARC 652
            AQL   FY  TCP   + V   V +   + R + A+LLR+ FHDC V GCD S+L+D T+    EK+ G N    RGFE++D+ K ++E VCP  VSCADI+ IA R S+A+ GGP + V+ GRRD   ++ +      +  PT +++  I  F++ G +   MVAL    HT+G A C
Sbjct:   20 AQLRHGFYEGTCPPAESIVGRVVFNHWDRNRTVTAALLRMQFHDCVVKGCDASLLIDPTTERPSEKSVGRNAG-VRGFEIIDEAKKELELVCPKTVSCADIVTIATRDSIALAGGPKFKVRTGRRDGLRSNPSDVK---LLGPTVSVATSIKAFKSIGFNVSTMVALIGGGHTVGVAHC 194          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER16_ARATH (Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 1.708e-31
Identity = 81/190 (42.63%), Postives = 109/190 (57.37%), Query Frame = 2
Query:   92 LVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSA-RGFEVVDDIKSKVEK--VCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            L+ F+    AQL TNFY K+CP +   V++AV+    +      + LRL FHDCFV GCD SILL   S    EK    + + A  GF+ V   K  +++   C   VSCADILA+A R  V + GGP++ V+LGRRD + +++A+     +P P+  L  L   F   GLS  DM+ALS AHTIG A C
Sbjct:   14 LIFFSSSVFAQLQTNFYRKSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASILLASPS----EKDHPDDKSLAGDGFDTVAKAKQALDRDPNCRNKVSCADILALATRDVVVLTGGPNYPVELGRRDGRLSTVASVQHS-LPQPSFKLDQLNTMFARHGLSQTDMIALSGAHTIGFAHC 198          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER6_ARATH (Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 8.477e-31
Identity = 75/193 (38.86%), Postives = 109/193 (56.48%), Query Frame = 2
Query:   77 LALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNIN-SARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            L L  LV       A LS+++Y+KTCP+   T+   V              LRL FHDC V+GCD SIL+  T   T E+ +  N +     F+V+  IK+ VE  CP +VSC+DIL  A R  ++++GGP  NVK GR+DS  + +     G +  P  T+ ++I+ F++ GL+ ++MVAL  AHTIG + C
Sbjct:    6 LCLFILVSSPCLLQANLSSDYYTKTCPEFEETLVQIVTDKQIAAPTTAVGTLRLFFHDCMVDGCDASILVASTPRKTSERDADINRSLPGDAFDVITRIKTAVELKCPNIVSCSDILVGATRSLISMVGGPRVNVKFGRKDSLVSDMNRV-EGKLARPNMTMDHIISIFESSGLTVQEMVALVGAHTIGFSHC 197          
The following BLAST results are available for this feature:
BLAST of CF835865 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
PER50_ARATH2.816e-3444.26Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=... [more]
PER60_ARATH1.070e-3340.49Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=... [more]
PER35_ARATH1.070e-3342.71Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=... [more]
PER73_ARATH3.113e-3341.21Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=... [more]
PER70_ARATH3.113e-3342.86Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=... [more]
PER24_ARATH1.545e-3242.93Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=... [more]
PER65_ARATH5.871e-3239.32Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=... [more]
PER8_ARATH7.667e-3241.34Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 ... [more]
PER16_ARATH1.708e-3142.63Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=... [more]
PER6_ARATH8.477e-3138.86Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02A14_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02A14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835865 ID=CF835865; Name=CF835865; organism=Citrus sinensis; type=EST; length=660bp
CTTCACACTGTTAATTAAATTTAATTAACAAAAGGAGCAAAAAATGGCTT
TTTCTTTTTCTTCTTTAATGGTGACTTTGGCATTAGGGTTTCTTGTGGTT
TTCACAGGCAAATCAAGTGCTCAACTCTCTACTAATTTCTATTCAAAAAC
TTGTCCAAAACTGTTGAATACGGTTAAATCTGCTGTTCAATCAGCAGTTT
CAAAAGAGCGTCGGATGGGCGCTTCTCTCCTTCGCTTACACTTTCATGAC
TGTTTCGTCAACGGGTGTGATGGGTCAATTCTACTAGATGACACGTCATC
TTTCACTGGTGAGAAGACTTCAGGACCAAATATCAATTCAGCAAGAGGAT
TTGAAGTTGTTGATGATATAAAATCAAAGGTAGAGAAAGTTTGCCCAGGA
GTCGTTTCATGCGCTGATATTTTAGCCATTGCTGCTCGGCATTCAGTTGC
AATTCTTGGAGGGCCAAGTTGGAATGTTAAACTTGGAAGAAGGGACTCCA
AAACAGCTAGCTTAGCTGCTGCTAATAGTGGTGTCATTCCTCCTCCTACC
TCCACTCTAAGCAACCTCATCAATAGATTCCAGGCTAAAGGTCTCTCTGC
CAAGGACATGGTTGCTTTATCCNGAGCGCATACAATTGGGCAAGCAAGGT
GTATAGCCTT
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