CF835869
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835869 vs. ExPASy Swiss-Prot
Match: MDH_RHOS4 (Malate dehydrogenase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=mdh PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 8.972e-11 Identity = 50/189 (26.46%), Postives = 91/189 (48.15%), Query Frame = 3 Query: 117 AGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTR-LDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATV 680 AGQIG L + A + V+ + + P +AL+ + + ++KG ++ E G ++ ++ G PRK GM R D++ N+ + K+ ++ HA PN V+ + NP + L++F+ +PA+ + + LD R +S + NV + DV + G H + P V ++TV Sbjct: 11 AGQIGGTLAHLAA---IKELGDVVLFDIAEGTPQGKALDIAQSGPSEGFDAVMKGA----NSYEEIAGADVCIVTAGVPRKPGMSRDDLIGINLKVMKSVGEGIKAHA-PNAFVICITNPLDAMVWALQQFS-GLPAEKVVGMAGVLDSARFRHFLSVEFNVSMRDV-TAFVLGGHGDTMVPLVRYSTV 189
BLAST of CF835869 vs. ExPASy Swiss-Prot
Match: MDH_RHOS1 (Malate dehydrogenase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=mdh PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.972e-11 Identity = 50/189 (26.46%), Postives = 91/189 (48.15%), Query Frame = 3 Query: 117 AGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTR-LDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATV 680 AGQIG L + A + V+ + + P +AL+ + + ++KG ++ E G ++ ++ G PRK GM R D++ N+ + K+ ++ HA PN V+ + NP + L++F+ +PA+ + + LD R +S + NV + DV + G H + P V ++TV Sbjct: 11 AGQIGGTLAHLAA---IKELGDVVLFDIAEGTPQGKALDIAQSGPSEGFDAVMKGA----NSYEEIAGADVCIVTAGVPRKPGMSRDDLIGINLKVMKSVGEGIKAHA-PNAFVICITNPLDAMVWALQQFS-GLPAEKVVGMAGVLDSARFRHFLSVEFNVSMRDV-TAFVLGGHGDTMVPLVRYSTV 189
BLAST of CF835869 vs. ExPASy Swiss-Prot
Match: MDH_NITHX (Malate dehydrogenase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=mdh PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.972e-11 Identity = 57/216 (26.39%), Postives = 108/216 (50.00%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTR-LDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVK 722 MA++ + ++ +GQIG L +I + V+ + + P ++L+ + VD + G ++ EA G + ++ G PRK GM R D++S N+ + + + ++++A P+ V+ + NP + L++ A +PAK + + LD +R ++++ +V V DV + G H S P V ++TV AG P+ +LVK Sbjct: 1 MARDKIALI---GSGQIGGTLAHLIG---LKELGDVVMFDIAEGIPQGKSLDIAQSSPVDGFDAKLTGA----NSYEALEGARVCIVTAGIPRKPGMSRDDLLSINLKVMEQVGAGIKKYA-PDAFVICITNPLDAMVWALQK-ASGMPAKKVVGMAGVLDSSRFRYFLADEFDVSVEDV-TAFVLGGHGDSMVPLVKYSTV---AG-IPLPDLVK 199 The following BLAST results are available for this feature:
BLAST of CF835869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 213
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835869 ID=CF835869; Name=CF835869; organism=Citrus sinensis; type=EST; length=730bpback to top |