CF835869
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835869 vs. ExPASy Swiss-Prot
Match: MDH_DEIDV (Malate dehydrogenase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=mdh PE=3 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 6.341e-57 Identity = 115/212 (54.25%), Postives = 148/212 (69.81%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELV 719 K+PVRV VTGAAGQIGY+L+ IA G MLG DQPVIL +L+I PA +AL GV MEL D A+PL+ VV + D + A + A++VG PRK GMER D++ N I+K Q AL Q A+ + KVLVV NPANTNALI ++ AP + + T + RLDHNRA+ Q++EK VS +KN+ IWGNHSS+QYPD++ ATV G +P +LV Sbjct: 4 KQPVRVAVTGAAGQIGYSLLFRIAAGDMLGKDQPVILQLLEITPALKALQGVVMELRDGAYPLLADVVTSDDPLVAFKDADYALLVGAMPRKAGMERGDLLGANGGIFKPQGQALNQVASRDVKVLVVGNPANTNALIAQQNAPDLDPRQFTAMVRLDHNRAISQLAEKTGQPVSAIKNITIWGNHSSTQYPDLSQATV----GGRPALDLV 211
BLAST of CF835869 vs. ExPASy Swiss-Prot
Match: MDH_DEIGD (Malate dehydrogenase OS=Deinococcus geothermalis (strain DSM 11300) GN=mdh PE=3 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 8.281e-57 Identity = 112/200 (56.00%), Postives = 143/200 (71.50%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 683 K+PVRV VTGAAGQIGY+L+ IA G MLG DQPVIL +L+I PA +AL GV MEL D AFPL+ +V + D + A + A++VG PRK GMER D++ N I+K Q AL + A+ + KVLVV NPANTNALI ++ AP + K T + RLDHNRA+ Q++EK VS +KN+ IWGNHSS+QYPD++ ATVN Sbjct: 8 KQPVRVAVTGAAGQIGYSLLFRIAAGDMLGKDQPVILQLLEITPALKALAGVVMELRDCAFPLLADIVTSDDPLVAFKDADYALLVGAMPRKAGMERGDLLGANGGIFKPQGEALNKVASRDVKVLVVGNPANTNALIAQQNAPDLDPKQFTAMVRLDHNRAISQLAEKTGQPVSAIKNITIWGNHSSTQYPDLSQATVN 207
BLAST of CF835869 vs. ExPASy Swiss-Prot
Match: MDH_POLNS (Malate dehydrogenase OS=Polynucleobacter necessarius (strain STIR1) GN=mdh PE=3 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.082e-56 Identity = 115/218 (52.75%), Postives = 150/218 (68.81%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD 725 MAK P+RV VTGAAGQIGY+L+ IA G +LG DQPVIL +L+IP A +AL GV MEL D AFPL+ G+ A +D + A +++A++VG PR GMERKD++S N I+ AQ AL A KVLVV NPANTNA I + AP IPAKN T + RLDHNRAL Q++ KLN V+D++ +++WGNHS + YPD AT++ K V++ + D Sbjct: 1 MAKAPMRVAVTGAAGQIGYSLLFRIANGDLLGKDQPVILQLLEIPDEKAQKALAGVMMELEDCAFPLLAGMTAHSDPMTAFKDIDVALLVGARPRGPGMERKDLLSANAQIFTAQGKALNVVAKKTVKVLVVGNPANTNAYIAMKSAPDIPAKNFTAMLRLDHNRALSQLANKLNKPVADIEKLVVWGNHSPTMYPDYRFATID----GKSVKDSIND 214
BLAST of CF835869 vs. ExPASy Swiss-Prot
Match: MDH_FRASC (Malate dehydrogenase OS=Frankia sp. (strain CcI3) GN=mdh PE=3 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 1.845e-56 Identity = 109/210 (51.90%), Postives = 144/210 (68.57%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPV 707 M+ PV V VTGAAGQIGYAL+ IA G +LG D PV L +L+IP A A G +EL D+AFPL+ GV DA A G N+A++VG PR +GMER D++S N I+K Q A+ AA + +VLVV NPANTNALI + AP +PA+ T +TRLDHNRA+ Q+++KL V +++K + IWGNHS++QYPD+ HA V +G + V Sbjct: 1 MSSTPVNVTVTGAAGQIGYALLFRIASGQLLGADTPVKLRLLEIPQAVRAAEGTALELEDSAFPLLAGVDVFDDAKRAFEGTNVALLVGARPRTKGMERGDLLSANGGIFKPQGEAINSGAAEDIRVLVVGNPANTNALIAQTHAPDVPAERFTAMTRLDHNRAIAQLAKKLGVPSAEIKKITIWGNHSATQYPDIFHAEVGGRSGAEAV 210
BLAST of CF835869 vs. ExPASy Swiss-Prot
Match: MDH_CUPTR (Malate dehydrogenase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=mdh PE=3 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 1.845e-56 Identity = 112/216 (51.85%), Postives = 148/216 (68.52%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD 725 MAK P+RV VTGAAGQIGY+L+ IA G MLG DQPVIL +LD+P A +A+ GV MEL D AFPL+ GVV T D A ++A++VG PR +GMERKD++ N I+ Q AL++ A+ N KVLVV NPANTNA I + AP++P +N T + RLDHNRAL QI+ K VS ++ + +WGNHS + Y D +ATV+ + V++L+ D Sbjct: 1 MAKAPMRVAVTGAAGQIGYSLLFRIANGDMLGKDQPVILQLLDLPQAQQAVKGVVMELEDCAFPLLAGVVITDDPKVAFKDADVALLVGARPRSKGMERKDLLEANAQIFTVQGKALDEVASRNVKVLVVGNPANTNAYIAMKSAPNLPRENFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNHSPTMYADYRYATVD----GQSVKDLIND 212
BLAST of CF835869 vs. ExPASy Swiss-Prot
Match: MDH_ALHEH (Malate dehydrogenase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=mdh PE=3 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 1.845e-56 Identity = 110/203 (54.19%), Postives = 142/203 (69.95%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAA 692 K PVRV VTGAAGQIGY+L+ IA G MLG DQPVIL +L+I PA EAL GV MEL D AFPL+ G+ + A EA +IA++VG PR GMERKD++ N +I+ AQ AL A+ + KVLVV NPANTN+LI + AP + +N T +TRLDHNRA+ Q++ K +++KN+IIWGNHS++QYPD++ V A Sbjct: 2 KAPVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEITPALEALKGVVMELEDCAFPLVSGITTSDKAEEAFKDADIALLVGARPRGPGMERKDLLEANAAIFSAQGKALNDAASRDVKVLVVGNPANTNSLIAQRNAPDLDPRNFTAMTRLDHNRAVAQLANKTGAHNTEIKNMIIWGNHSATQYPDISKTKVKGEA 204
BLAST of CF835869 vs. ExPASy Swiss-Prot
Match: MDH_RALEJ (Malate dehydrogenase OS=Ralstonia eutropha (strain JMP134) GN=mdh PE=3 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 2.409e-56 Identity = 112/216 (51.85%), Postives = 147/216 (68.06%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD 725 MAK P+RV VTGAAGQIGY+L+ IA G MLG DQPVIL +LD+P A A+ GV MEL D AFPL+ GVV T D A ++A++VG PR +GMERKD++ N I+ Q AL++ A+ N KVLVV NPANTNA I + APS+P +N T + RLDHNRAL QI+ K V+ ++ + +WGNHS + Y D +ATV+ K V++++ D Sbjct: 1 MAKAPMRVAVTGAAGQIGYSLLFRIANGDMLGKDQPVILQLLDLPQAQAAVKGVVMELEDCAFPLLAGVVITDDPKVAFKDADVALLVGARPRSKGMERKDLLEANAQIFTVQGKALDEVASRNVKVLVVGNPANTNAYIAMKSAPSLPRENFTAMLRLDHNRALSQIAAKTGKPVASIEKMFVWGNHSPTMYADYRYATVD----GKSVKDMIND 212
BLAST of CF835869 vs. ExPASy Swiss-Prot
Match: MDH_FRAAA (Malate dehydrogenase OS=Frankia alni (strain ACN14a) GN=mdh PE=3 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 4.110e-56 Identity = 108/210 (51.43%), Postives = 144/210 (68.57%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPV 707 M+ PV V VTGAAGQIGYAL+ IA G +LG D PV L +L+IP A A G +EL D+AFPL+ GV DA A G N+A++VG PR +GMER D++S N I+K Q A+ AA + +VLVV NPANTNALI + AP +PA+ T +TRLDHNRA+ Q+++KL V ++++ + IWGNHS++QYPD+ HA V +G + V Sbjct: 1 MSSTPVNVTVTGAAGQIGYALLFRIASGQLLGADTPVRLRLLEIPQAVRAAEGTALELEDSAFPLLAGVDVFDDAKRAFEGTNVALLVGARPRTKGMERGDLLSANGGIFKPQGEAINSGAAEDIRVLVVGNPANTNALIAQTHAPDVPAERFTAMTRLDHNRAIAQLAKKLGVPSAEIRKITIWGNHSATQYPDIFHAQVGGRSGAEAV 210
BLAST of CF835869 vs. ExPASy Swiss-Prot
Match: MDH_CHRVO (Malate dehydrogenase OS=Chromobacterium violaceum GN=mdh PE=3 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 4.110e-56 Identity = 113/215 (52.56%), Postives = 144/215 (66.98%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDD 728 K PVRV VTGAAGQIGY+L+ IA G MLG DQPVILH+LD+P A AL GV MEL D AFPL+ G+VAT D A V +A++VG PR +GMERKD++ N +I+ Q AL HAA + KVLVV NPANTNA I + AP + KN T + RLDHNRAL QI+ K V+ ++ + +WGNHS + Y D AT++ + V+ ++ DD Sbjct: 2 KAPVRVAVTGAAGQIGYSLLFRIASGEMLGKDQPVILHLLDLPQAQTALKGVMMELEDCAFPLLAGMVATDDPNVAFKDVKVALLVGARPRSKGMERKDLLEANGAIFTVQGKALNDHAARDVKVLVVGNPANTNAWIAMKSAPDLDPKNFTAMLRLDHNRALSQIAAKTGKPVASIEKLAVWGNHSPTMYADYRFATID----GQSVKAMINDD 212
BLAST of CF835869 vs. ExPASy Swiss-Prot
Match: MDH_AZOSB (Malate dehydrogenase OS=Azoarcus sp. (strain BH72) GN=mdh PE=3 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 4.110e-56 Identity = 113/219 (51.60%), Postives = 149/219 (68.04%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS---IPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD 725 M+K PVRV VTGAAGQIGY+L+ IA G MLG DQPVIL +LD+P A +A+ GV MEL D AFPL+ G++AT D A +A++VG PR GMERKD++++N I+ Q +A+ Q+A P+CKVLVV NP NTNA I KE A +PAKN T + RLDHNRAL Q++ K +VS +KN+++WGNHS + Y D N + V++L+ D Sbjct: 1 MSKAPVRVAVTGAAGQIGYSLLFRIASGEMLGKDQPVILQLLDLPQAQKAVKGVMMELEDCAFPLLAGMIATDDPNVAFKDAKVALLVGARPRGPGMERKDLLTENAKIFTVQGAAIGQYADPDCKVLVVGNPCNTNAYIAKEVAQKYGRVPAKNFTGMLRLDHNRALSQLAGKSGREVSSLKNLVVWGNHSPTMYADYRFVKSNGDS----VKDLIND 215 The following BLAST results are available for this feature:
BLAST of CF835869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 213
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835869 ID=CF835869; Name=CF835869; organism=Citrus sinensis; type=EST; length=730bpback to top |