CF835870
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835870 vs. ExPASy Swiss-Prot
Match: FADA_AERHH (3-ketoacyl-CoA thiolase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=fadA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.991e-17 Identity = 50/111 (45.05%), Postives = 66/111 (59.46%), Query Frame = -1 Query: 230 EKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNP---DKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKN 553 ++ LGL AKI A A + P A KA+ AGL +D +E+NEAFA +L K LGL +KVN++GGA+ALGHPLGCSGARI TLL ++ +K+ Sbjct: 254 DRAKALGLTPRAKIRAMAVAGCDAAIMGYGPVPATQKALKRAGLTIGDIDLFELNEAFAAQSLPCVKDLGLQDVVDEKVNLNGGAIALGHPLGCSGARISTTLLNLMEEKD 364
BLAST of CF835870 vs. ExPASy Swiss-Prot
Match: THIK_ENCCU (3-ketoacyl-CoA thiolase, peroxisomal OS=Encephalitozoon cuniculi GN=FOX3 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 6.519e-17 Identity = 44/108 (40.74%), Postives = 64/108 (59.26%), Query Frame = -1 Query: 233 REKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQK 556 R + +LGL V+A+ + P P +AI K + GLE Q+ +EINEAFA L + L + D+VN +GG++ALGHP+G SGARI+ TLL V++ + Sbjct: 248 RRRADELGLPVVAEFIDFIAVGLKPRDMGLGPVVAIEKLLKRNGLEKDQISYFEINEAFASQVLCCLRKLQIGEDRVNRYGGSIALGHPIGASGARIVCTLLSVMKNE 355
BLAST of CF835870 vs. ExPASy Swiss-Prot
Match: FADA_SHELP (3-ketoacyl-CoA thiolase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=fadA PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 6.519e-17 Identity = 50/111 (45.05%), Postives = 66/111 (59.46%), Query Frame = -1 Query: 230 EKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNP---DKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKN 553 EK LGL + A+I A A + P A KA+ AGL + +D E+NEAFA +L K LGL +KVN++GGA+ALGHPLGCSGARI TL+ ++ K+ Sbjct: 254 EKAKALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALQRAGLTMNDIDLIELNEAFAAQSLPCVKDLGLMDLVDEKVNLNGGAIALGHPLGCSGARISTTLINLMESKD 364
BLAST of CF835870 vs. ExPASy Swiss-Prot
Match: FADA_SHEFN (3-ketoacyl-CoA thiolase OS=Shewanella frigidimarina (strain NCIMB 400) GN=fadA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 8.514e-17 Identity = 48/110 (43.64%), Postives = 67/110 (60.91%), Query Frame = -1 Query: 230 KVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNP---DKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKN 550 K LGL + A+I A A + P A KA++ AGL + +D E+NEAFA +L K LGL +K+N++GGA+ALGHPLGCSGARI TL+ ++ +K+ Sbjct: 255 KARALGLTIRARIRSMAVAGCDAAIMGYGPVPATKKALARAGLSVADLDLIELNEAFAAQSLPCVKDLGLQDVVDEKINLNGGAIALGHPLGCSGARISTTLINLMEEKD 364
BLAST of CF835870 vs. ExPASy Swiss-Prot
Match: THIM_BOVIN (3-ketoacyl-CoA thiolase, mitochondrial OS=Bos taurus GN=ACAA2 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.112e-16 Identity = 49/129 (37.98%), Postives = 68/129 (52.71%), Query Frame = -1 Query: 167 EKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVE 553 + V K +A+I GY + P + P AI A+ GL +D E+NEAFA LA +K L L+P K NV+GGA+ALGHPL SG+RI L+ LR++ KY A+++E Sbjct: 266 DAVKKHNFTPLARIVGYFVSGCDPTIMGIGPVPAISGALKKTGLSLKDMDLVEVNEAFAPQYLAVEKSLNLDPSKTNVNGGAIALGHPLAGSGSRITAHLVHELRRRGGKYAVGSACIGGGQGIAVIIE 394
BLAST of CF835870 vs. ExPASy Swiss-Prot
Match: THIL_ZOORA (Acetyl-CoA acetyltransferase OS=Zoogloea ramigera GN=phbA PE=1 SV=4) HSP 1 Score: 86.2705 bits (212), Expect = 1.112e-16 Identity = 45/101 (44.55%), Postives = 63/101 (62.38%), Query Frame = -1 Query: 233 GLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQK 535 G+Q + +I +A P++ T P A KA+ AG + +D E NEAFA A A K LG +P VNV+GGA+A+GHP+G SGARIL TLL ++++ Sbjct: 268 GIQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRR 368
BLAST of CF835870 vs. ExPASy Swiss-Prot
Match: FADA_YERPS (3-ketoacyl-CoA thiolase OS=Yersinia pseudotuberculosis GN=fadA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.112e-16 Identity = 49/109 (44.95%), Postives = 67/109 (61.47%), Query Frame = -1 Query: 221 LGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKY 538 LGL A+I A P + P A A+ AGLE + + +E+NEAFA +LA K LGL DKVN++GGA+ALGHPLGCSGARI TLL ++ +++ ++ Sbjct: 259 LGLTPRARIRSMAVVGCDPSIMGYGPVPASQLALKRAGLELADIGLFELNEAFAAQSLACLKGLGLLESMDDKVNLNGGAIALGHPLGCSGARISTTLLNLMERRDVQF 367
BLAST of CF835870 vs. ExPASy Swiss-Prot
Match: FADA_YERPP (3-ketoacyl-CoA thiolase OS=Yersinia pestis (strain Pestoides F) GN=fadA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.112e-16 Identity = 49/109 (44.95%), Postives = 67/109 (61.47%), Query Frame = -1 Query: 221 LGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKY 538 LGL A+I A P + P A A+ AGLE + + +E+NEAFA +LA K LGL DKVN++GGA+ALGHPLGCSGARI TLL ++ +++ ++ Sbjct: 259 LGLTPRARIRSMAVVGCDPSIMGYGPVPASQLALKRAGLELADIGLFELNEAFAAQSLACLKGLGLLESMDDKVNLNGGAIALGHPLGCSGARISTTLLNLMERRDVQF 367
BLAST of CF835870 vs. ExPASy Swiss-Prot
Match: FADA_YERPN (3-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=fadA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.112e-16 Identity = 49/109 (44.95%), Postives = 67/109 (61.47%), Query Frame = -1 Query: 221 LGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKY 538 LGL A+I A P + P A A+ AGLE + + +E+NEAFA +LA K LGL DKVN++GGA+ALGHPLGCSGARI TLL ++ +++ ++ Sbjct: 259 LGLTPRARIRSMAVVGCDPSIMGYGPVPASQLALKRAGLELADIGLFELNEAFAAQSLACLKGLGLLESMDDKVNLNGGAIALGHPLGCSGARISTTLLNLMERRDVQF 367
BLAST of CF835870 vs. ExPASy Swiss-Prot
Match: FADA_YERPE (3-ketoacyl-CoA thiolase OS=Yersinia pestis GN=fadA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.112e-16 Identity = 49/109 (44.95%), Postives = 67/109 (61.47%), Query Frame = -1 Query: 221 LGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKY 538 LGL A+I A P + P A A+ AGLE + + +E+NEAFA +LA K LGL DKVN++GGA+ALGHPLGCSGARI TLL ++ +++ ++ Sbjct: 259 LGLTPRARIRSMAVVGCDPSIMGYGPVPASQLALKRAGLELADIGLFELNEAFAAQSLACLKGLGLLESMDDKVNLNGGAIALGHPLGCSGARISTTLLNLMERRDVQF 367 The following BLAST results are available for this feature:
BLAST of CF835870 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 172
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835870 ID=CF835870; Name=CF835870; organism=Citrus sinensis; type=EST; length=556bpback to top |