CF835871
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: FADA_SHEAM (3-ketoacyl-CoA thiolase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=fadA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.377e-14 Identity = 42/81 (51.85%), Postives = 54/81 (66.67%), Query Frame = 3 Query: 96 PALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNP---DKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKN 329 P A KA++ AGL +D E+NEAFA +L K LGL DKVN++GGA+ALGHPLGCSGARI TL+ ++ K+ Sbjct: 284 PVPATQKALARAGLSIQDMDVIELNEAFAAQSLPCVKDLGLMDVVEDKVNLNGGAIALGHPLGCSGARISTTLINLMEHKD 364
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: THIK_ENCCU (3-ketoacyl-CoA thiolase, peroxisomal OS=Encephalitozoon cuniculi GN=FOX3 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.799e-14 Identity = 39/92 (42.39%), Postives = 55/92 (59.78%), Query Frame = 3 Query: 51 DYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQK 326 D+ P P +AI K + GLE Q+ +EINEAFA L + L + D+VN +GG++ALGHP+G SGARI+ TLL V++ + Sbjct: 264 DFIAVGLKPRDMGLGPVVAIEKLLKRNGLEKDQISYFEINEAFASQVLCCLRKLQIGEDRVNRYGGSIALGHPIGASGARIVCTLLSVMKNE 355
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: FADA_ENTCL (3-ketoacyl-CoA thiolase OS=Enterobacter cloacae GN=fadA PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.799e-14 Identity = 42/91 (46.15%), Postives = 58/91 (63.74%), Query Frame = 3 Query: 75 PEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKY 338 P + P A A+ AGL AS +D +E+NEAFA L K LGL +K+N++GGA+ALGHPLGCSGARI TL+ ++ K+ ++ Sbjct: 277 PSIMGYGPVPASKLALKKAGLTASDIDLFEMNEAFAAQILPCIKDLGLMGQIDEKINLNGGAIALGHPLGCSGARISTTLINLMEGKDAQF 367
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: THLA_STAES (Probable acetyl-CoA acyltransferase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_2384 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.350e-14 Identity = 40/79 (50.63%), Postives = 53/79 (67.09%), Query Frame = 3 Query: 72 APEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLL 308 AP + P AI KA+ + + VD +E+NEAFA ++A + L L DKVNV+GGA+ALGHP+G SGAR LV+LL Sbjct: 285 APSIMGIGPVEAIHKALKRSNKVINDVDIFELNEAFAAQSIAVNRELQLPQDKVNVNGGAIALGHPIGASGARTLVSLL 363
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: THLA_STAEQ (Probable acetyl-CoA acyltransferase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP0032 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.350e-14 Identity = 40/79 (50.63%), Postives = 53/79 (67.09%), Query Frame = 3 Query: 72 APEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLL 308 AP + P AI KA+ + + VD +E+NEAFA ++A + L L DKVNV+GGA+ALGHP+G SGAR LV+LL Sbjct: 285 APSIMGIGPVEAIHKALKRSNKVINDVDIFELNEAFAAQSIAVNRELQLPQDKVNVNGGAIALGHPIGASGARTLVSLL 363
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: FADA_SHIFL (3-ketoacyl-CoA thiolase OS=Shigella flexneri GN=fadA PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.350e-14 Identity = 42/91 (46.15%), Postives = 58/91 (63.74%), Query Frame = 3 Query: 75 PEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNP---DKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKY 338 P + P A A+ AGL AS + +E+NEAFA L K LGL +K+N++GGA+ALGHPLGCSGARI TLL ++ +K+ ++ Sbjct: 277 PSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLMERKDVQF 367
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: FADA_SHIF8 (3-ketoacyl-CoA thiolase OS=Shigella flexneri serotype 5b (strain 8401) GN=fadA PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.350e-14 Identity = 42/91 (46.15%), Postives = 58/91 (63.74%), Query Frame = 3 Query: 75 PEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNP---DKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKY 338 P + P A A+ AGL AS + +E+NEAFA L K LGL +K+N++GGA+ALGHPLGCSGARI TLL ++ +K+ ++ Sbjct: 277 PSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLMERKDVQF 367
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: FADA_SHIBS (3-ketoacyl-CoA thiolase OS=Shigella boydii serotype 4 (strain Sb227) GN=fadA PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.350e-14 Identity = 42/91 (46.15%), Postives = 58/91 (63.74%), Query Frame = 3 Query: 75 PEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNP---DKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKY 338 P + P A A+ AGL AS + +E+NEAFA L K LGL +K+N++GGA+ALGHPLGCSGARI TLL ++ +K+ ++ Sbjct: 277 PSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLMERKDVQF 367
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: FADA_SHESW (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain W3-18-1) GN=fadA PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.350e-14 Identity = 40/81 (49.38%), Postives = 55/81 (67.90%), Query Frame = 3 Query: 96 PALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNP---DKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKN 329 P A KA++ AG+ + +D E+NEAFA +L K LGL DK+N++GGA+ALGHPLGCSGARI TL+ ++ K+ Sbjct: 284 PVPATQKALARAGITVADLDVIELNEAFAAQSLPCVKDLGLADVVDDKINLNGGAIALGHPLGCSGARISTTLINLMEDKD 364
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: FADA_SHEPC (3-ketoacyl-CoA thiolase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=fadA PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.350e-14 Identity = 40/81 (49.38%), Postives = 55/81 (67.90%), Query Frame = 3 Query: 96 PALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNP---DKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKN 329 P A KA++ AG+ + +D E+NEAFA +L K LGL DK+N++GGA+ALGHPLGCSGARI TL+ ++ K+ Sbjct: 284 PVPATQKALARAGITVADLDVIELNEAFAAQSLPCVKDLGLADVVDDKINLNGGAIALGHPLGCSGARISTTLINLMEDKD 364 The following BLAST results are available for this feature:
BLAST of CF835871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835871 ID=CF835871; Name=CF835871; organism=Citrus sinensis; type=EST; length=560bpback to top |