CF835871
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: FADA_ERWCT (3-ketoacyl-CoA thiolase OS=Erwinia carotovora subsp. atroseptica GN=fadA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.431e-13 Identity = 39/91 (42.86%), Postives = 56/91 (61.54%), Query Frame = 3 Query: 75 PEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNP---DKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKY 338 P + P A A+ AGL + + +E+NEAFA L K LGL +KVN++GGA+ALGHPLGCSGARI TL+ ++ ++ ++ Sbjct: 277 PSIMGYGPVPATKLALKRAGLSLADIGIFELNEAFAAQTLPCIKDLGLLEQLDEKVNLNGGAIALGHPLGCSGARISTTLINLMESRDAQF 367
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: FADA_PHOPR (3-ketoacyl-CoA thiolase OS=Photobacterium profundum GN=fadA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.787e-13 Identity = 42/102 (41.18%), Postives = 58/102 (56.86%), Query Frame = 3 Query: 42 RSQDYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNP---DKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKY 338 R + A A P + P A KA+ AGL + E+NEAFA +L K LGL +KVN++GGA+ALGHPLGCSG+RI TL+ + + ++ Sbjct: 266 RVKSMAVAGCDPSIMGYGPVPATQKALKRAGLSIDDIGMVELNEAFAAQSLPCAKDLGLLDKIDEKVNLNGGAIALGHPLGCSGSRISTTLINQMEHHDVQF 367
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: FADA_PSEA6 (3-ketoacyl-CoA thiolase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=fadA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 9.871e-13 Identity = 38/77 (49.35%), Postives = 51/77 (66.23%), Query Frame = 3 Query: 96 PALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG---LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVL 317 P A KA+ AG+ + ++ E NEAFA AL+ K LG DKVN++GGA+ALGHPLGCSG+RI TL+ ++ Sbjct: 283 PVPATQKALKRAGMTMADIELAEFNEAFAAQALSCIKQLGWLDTYEDKVNLNGGAIALGHPLGCSGSRISTTLINLM 359
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: PAAJ_ECOLX (Beta-ketoadipyl-CoA thiolase OS=Escherichia coli GN=paaJ PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.199e-12 Identity = 43/116 (37.07%), Postives = 59/116 (50.86%), Query Frame = 3 Query: 57 ADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDK--VNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXXASALVVELV 398 A A P + P A + + AGL +D E+NEAFA AL + LGL D VN +GGA+ALGHPLG SGAR+ + L ++N +Y A+++E V Sbjct: 286 ATAGVEPRLMGLGPVPATRRVLERAGLSIHDMDVIELNEAFAAQALGVLRELGLPDDAPHVNPNGGAIALGHPLGMSGARLALAASHELHRRNGRYALCTMCIGVGQGIAMILERV 401
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: PAAJ_ECOLI (Beta-ketoadipyl-CoA thiolase OS=Escherichia coli (strain K12) GN=paaJ PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.199e-12 Identity = 43/116 (37.07%), Postives = 59/116 (50.86%), Query Frame = 3 Query: 57 ADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDK--VNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXXASALVVELV 398 A A P + P A + + AGL +D E+NEAFA AL + LGL D VN +GGA+ALGHPLG SGAR+ + L ++N +Y A+++E V Sbjct: 286 ATAGVEPRLMGLGPVPATRRVLERAGLSIHDMDVIELNEAFAAQALGVLRELGLPDDAPHVNPNGGAIALGHPLGMSGARLALAASHELHRRNGRYALCTMCIGVGQGIAMILERV 401
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: FADA_COLP3 (3-ketoacyl-CoA thiolase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=fadA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.872e-12 Identity = 36/83 (43.37%), Postives = 53/83 (63.86%), Query Frame = 3 Query: 75 PEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNP--DKVNVHGGAVALGHPLGCSGARILVTLLGVL 317 P P A KA+ AGL + ++ +E NEAFA AL+ + L + D++N++GGA+ALGHPLGCSG+RI TL+ ++ Sbjct: 277 PATMGFGPVPATKKALKRAGLSIADIELFEFNEAFAAQALSCVRSLKVEDKMDQINLNGGAIALGHPLGCSGSRISGTLINLM 359
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: PCAF_PSESB (Beta-ketoadipyl-CoA thiolase OS=Pseudomonas sp. (strain B13) GN=pcaF PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.751e-12 Identity = 43/116 (37.07%), Postives = 59/116 (50.86%), Query Frame = 3 Query: 57 ADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPD--KVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXXASALVVELV 398 A A AP + P A+ K + L + D E+NEAFA LA + LG+ D +VN +GGA+ALGHPLG SGAR+++T + L + + AL VE V Sbjct: 286 ASAGVAPRVMGIGPVPAVRKLLERLNLSVADFDVIELNEAFAAQGLAVTRELGIADDDARVNPNGGAIALGHPLGASGARLVLTAVHQLEKSGGQRGLCTMCVGVGQGVALAVERV 401
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: PCAF_PSEPU (Beta-ketoadipyl-CoA thiolase OS=Pseudomonas putida GN=pcaF PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.425e-11 Identity = 43/116 (37.07%), Postives = 58/116 (50.00%), Query Frame = 3 Query: 57 ADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPD--KVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXXASALVVELV 398 A AP + P A+ K G+ S D E+NEAFA LA + LG+ D +VN +GGA+ALGHPLG SGAR+++T L L + + AL +E V Sbjct: 285 ASGGVAPRVMGIGPVPAVRKLTERLGVAVSDFDVIELNEAFASQGLAVLRELGVADDAPQVNPNGGAIALGHPLGMSGARLVLTALHQLEKSGGRKGLATMCVGVGQGLALAIERV 400
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: PCAF_PSEAE (Beta-ketoadipyl-CoA thiolase OS=Pseudomonas aeruginosa GN=pcaF PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.425e-11 Identity = 44/116 (37.93%), Postives = 58/116 (50.00%), Query Frame = 3 Query: 57 ADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPD--KVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXXASALVVELV 398 A A AP + P A+ K + L D E+NEAFA LA + LG+ D KVN +GGA+ALGHPLG SGAR+++T L L + + AL +E V Sbjct: 286 ASAGVAPRIMGIGPVPAVRKLLRRLDLAIDAFDVIELNEAFASQGLACLRELGVADDSEKVNPNGGAIALGHPLGMSGARLVLTALHQLEKSGGRRGLATMCVGVGQGLALAIERV 401 The following BLAST results are available for this feature:
BLAST of CF835871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835871 ID=CF835871; Name=CF835871; organism=Citrus sinensis; type=EST; length=560bpback to top |