CF835871
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: THIKB_RAT (3-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus norvegicus GN=Acaa1b PE=2 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 4.575e-18 Identity = 46/93 (49.46%), Postives = 62/93 (66.67%), Query Frame = 3 Query: 48 QDYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQK 326 + YA P++ PA AIP A+ AGL + +D +EINEAFA AL + LG+ +KVN GGA+ALGHPLGC+GAR +VTLL L+++ Sbjct: 305 RSYAVVGVPPDIMGIGPAYAIPAALQKAGLTVNDIDIFEINEAFASQALYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRR 397
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: THIKA_RAT (3-ketoacyl-CoA thiolase A, peroxisomal OS=Rattus norvegicus GN=Acaa1a PE=2 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 4.575e-18 Identity = 46/93 (49.46%), Postives = 62/93 (66.67%), Query Frame = 3 Query: 48 QDYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQK 326 + YA P++ PA AIP A+ AGL + +D +EINEAFA AL + LG+ +KVN GGA+ALGHPLGC+GAR +VTLL L+++ Sbjct: 305 RSYAVVGVPPDIMGIGPAYAIPAALQKAGLTVNDIDIFEINEAFASQALYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRR 397
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: THIL_MACFA (Acetyl-CoA acetyltransferase, mitochondrial OS=Macaca fascicularis GN=ACAT1 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.019e-17 Identity = 47/113 (41.59%), Postives = 71/113 (62.83%), Query Frame = 3 Query: 54 YADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXXASALVVE 392 +ADAA P F AP A+ + + GL+ + +E+NEAF++V LAN K+L ++P KVN++GGAV+LGHP+G SGARI+ L L+Q +Y ASA++++ Sbjct: 315 FADAAVEPIDFPIAPVHAVSMVLKDVGLKKEDIAMWEVNEAFSLVVLANIKMLEIDPQKVNINGGAVSLGHPIGMSGARIVGHLTHALKQ--GEYGLASICNGGGGASAMLIQ 425
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: THIKB_MOUSE (3-ketoacyl-CoA thiolase B, peroxisomal OS=Mus musculus GN=Acaa1b PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.019e-17 Identity = 45/93 (48.39%), Postives = 62/93 (66.67%), Query Frame = 3 Query: 48 QDYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQK 326 + YA P++ PA AIP A+ AGL + +D +EINEAFA A+ + LG+ +KVN GGA+ALGHPLGC+GAR +VTLL L+++ Sbjct: 305 RSYAVVGVPPDVMGIGPAYAIPAALQKAGLTVNDIDIFEINEAFASQAVYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRR 397
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: THIKA_MOUSE (3-ketoacyl-CoA thiolase A, peroxisomal OS=Mus musculus GN=Acaa1a PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.019e-17 Identity = 45/93 (48.39%), Postives = 62/93 (66.67%), Query Frame = 3 Query: 48 QDYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQK 326 + YA P++ PA AIP A+ AGL + +D +EINEAFA A+ + LG+ +KVN GGA+ALGHPLGC+GAR +VTLL L+++ Sbjct: 305 RSYAVVGVPPDVMGIGPAYAIPAALQKAGLTVNDIDIFEINEAFASQAVYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRR 397
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: THIL_HUMAN (Acetyl-CoA acetyltransferase, mitochondrial OS=Homo sapiens GN=ACAT1 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.738e-17 Identity = 47/113 (41.59%), Postives = 70/113 (61.95%), Query Frame = 3 Query: 54 YADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXXASALVVE 392 +ADAA P F AP A + + GL+ + +E+NEAF++V LAN K+L ++P KVN++GGAV+LGHP+G SGARI+ L L+Q +Y ASA++++ Sbjct: 315 FADAAVEPIDFPIAPVYAASMVLKDVGLKKEDIAMWEVNEAFSLVVLANIKMLEIDPQKVNINGGAVSLGHPIGMSGARIVGHLTHALKQ--GEYGLASICNGGGGASAMLIQ 425
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: ATOB_ECOLI (Acetyl-CoA acetyltransferase OS=Escherichia coli (strain K12) GN=atoB PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.738e-17 Identity = 46/96 (47.92%), Postives = 61/96 (63.54%), Query Frame = 3 Query: 42 RSQDYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKN 329 R + YA P + P A KA+ AGL+ + +D E NEAFA LA K LG + +KVNV+GGA+ALGHP+G SGARILVTLL ++ ++ Sbjct: 275 RIKSYASGGVPPALMGMGPVPATQKALQLAGLQLADIDLIEANEAFAAQFLAVGKNLGFDSEKVNVNGGAIALGHPIGASGARILVTLLHAMQARD 370
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: THIK2_ARATH (3-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidopsis thaliana GN=PED1 PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 2.965e-17 Identity = 42/91 (46.15%), Postives = 62/91 (68.13%), Query Frame = 3 Query: 54 YADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQK 326 +A P + PA+AIP A+ AGLE +D +EINEAFA + + LGL+P+K+NV+GGA+A+GHPLG +GAR + TLL ++++ Sbjct: 323 FAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRR 413
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: THIK_YEAST (3-ketoacyl-CoA thiolase, peroxisomal OS=Saccharomyces cerevisiae GN=FOX3 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.873e-17 Identity = 43/91 (47.25%), Postives = 58/91 (63.74%), Query Frame = 3 Query: 51 DYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 323 D+ PE+ PA AIPK + GL+ +D +EINEAFA AL LG++ +KVN GGA+ALGHPLGC+GAR + T+L L++ Sbjct: 304 DFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQDIDIFEINEAFAAQALYCIHKLGIDLNKVNPRGGAIALGHPLGCTGARQVATILRELKK 394
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: THIL_CHRVO (Acetyl-CoA acetyltransferase OS=Chromobacterium violaceum GN=phaA PE=3 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 8.628e-17 Identity = 50/113 (44.25%), Postives = 61/113 (53.98%), Query Frame = 3 Query: 54 YADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXXASALVVE 392 YA PE+ P A KA+S AG +D E NEAFA AL K LG DKVNV+GGA+ALGHP+G SG R+LVTLL ++++ K AL VE Sbjct: 278 YALTGCEPEIMGIGPVSATRKALSKAGWTVEDLDLVEANEAFAAQALGVAKELGWGSDKVNVNGGAIALGHPIGASGCRVLVTLLHEMQRRGAKKGLATLCIGGGMGVALAVE 390 The following BLAST results are available for this feature:
BLAST of CF835871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835871 ID=CF835871; Name=CF835871; organism=Citrus sinensis; type=EST; length=560bpback to top |