CF835871
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: THIK1_ARATH (3-ketoacyl-CoA thiolase 1, peroxisomal OS=Arabidopsis thaliana GN=KAT1 PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 8.628e-17 Identity = 41/84 (48.81%), Postives = 60/84 (71.43%), Query Frame = 3 Query: 75 PEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQK 326 P + PA+AIP A+ AGLE + VD +EINEAFA + + LGL+ +K+NV+GGA+A+GHPLG +GAR + TLL ++++ Sbjct: 322 PAIMGVGPAVAIPAAVKAAGLELNDVDLFEINEAFASQFVYCRNKLGLDAEKINVNGGAIAIGHPLGATGARCVATLLHEMKRR 405
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: FADA_MARAV (3-ketoacyl-CoA thiolase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=fadA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 8.628e-17 Identity = 44/90 (48.89%), Postives = 60/90 (66.67%), Query Frame = 3 Query: 75 PEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFA---VVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWK 335 P + P A KA+ AGL+ +D +E+NEAFA + L + KLLG+ +KVN++GGA+ALGHPLGCSGARI TLL +++ K K Sbjct: 281 PAIMGYGPVPATKKALKRAGLKVEDIDFWELNEAFAGQSLPVLKDLKLLGVMEEKVNLNGGAIALGHPLGCSGARISTTLLNIMQAKGGK 370
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: FADA_BACSU (3-ketoacyl-CoA thiolase OS=Bacillus subtilis GN=fadA PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.127e-16 Identity = 42/116 (36.21%), Postives = 71/116 (61.21%), Query Frame = 3 Query: 48 QDYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXXASALVVEL 395 + +A PE+ P AIP+A+ AGL+ + +E+NEAFA A+ + LG++ +KVNV+GGA+ALGHPLGC+G ++ ++L+ ++++N ++ +A V EL Sbjct: 275 RSFAVGGVPPEVMGIGPVEAIPRALKLAGLQLQDIGLFELNEAFASQAIQVIRELGIDEEKVNVNGGAIALGHPLGCTGTKLTLSLIHEMKRRNEQFGVVTMCIGGGMGAAGVFEL 390
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: THL_BACSU (Acetyl-CoA acetyltransferase OS=Bacillus subtilis GN=mmgA PE=2 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 1.472e-16 Identity = 40/78 (51.28%), Postives = 57/78 (73.08%), Query Frame = 3 Query: 93 APALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQK 326 AP AI K + GL +D +E+NEAFA V L +K++G + +KVNV+GGA+ALGHP+G SGARIL+TL+ L+++ Sbjct: 292 APGFAINKLLKKNGLTVQDIDLFEVNEAFASVVLTCEKIVGFDLEKVNVNGGAIALGHPIGASGARILMTLVYELKRR 369
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: THLA_STAAW (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain MW2) GN=MW0330 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.472e-16 Identity = 43/84 (51.19%), Postives = 57/84 (67.86%), Query Frame = 3 Query: 75 PEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQK 326 P + AP A+ KA+ + E S +D +E+NEAFA +LA + L L P+KVNV GGA+ALGHP+G SGAR+LVTLL L + Sbjct: 286 PSIMGIAPVGAVEKALKRSKKELSDIDVFELNEAFAAQSLAVDRELKLPPEKVNVKGGAIALGHPIGASGARVLVTLLHQLNDE 369
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: THLA_STAAS (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain MSSA476) GN=SAS0330 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.472e-16 Identity = 43/84 (51.19%), Postives = 57/84 (67.86%), Query Frame = 3 Query: 75 PEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQK 326 P + AP A+ KA+ + E S +D +E+NEAFA +LA + L L P+KVNV GGA+ALGHP+G SGAR+LVTLL L + Sbjct: 286 PSIMGIAPVGAVEKALKRSKKELSDIDVFELNEAFAAQSLAVDRELKLPPEKVNVKGGAIALGHPIGASGARVLVTLLHQLNDE 369
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: THLA_STAAC (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain COL) GN=SACOL0426 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.472e-16 Identity = 43/84 (51.19%), Postives = 57/84 (67.86%), Query Frame = 3 Query: 75 PEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQK 326 P + AP A+ KA+ + E S +D +E+NEAFA +LA + L L P+KVNV GGA+ALGHP+G SGAR+LVTLL L + Sbjct: 286 PSIMGIAPVGAVEKALKRSKKELSDIDVFELNEAFAAQSLAVDRELKLPPEKVNVKGGAIALGHPIGASGARVLVTLLHQLNDE 369
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: THLA_STAAB (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=SAB0304 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.472e-16 Identity = 43/84 (51.19%), Postives = 57/84 (67.86%), Query Frame = 3 Query: 75 PEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQK 326 P + AP A+ KA+ + E S +D +E+NEAFA +LA + L L P+KVNV GGA+ALGHP+G SGAR+LVTLL L + Sbjct: 286 PSIMGIAPVGAVEKALKRSKKELSDIDVFELNEAFAAQSLAVDRELKLPPEKVNVKGGAIALGHPIGASGARVLVTLLHQLNDE 369
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: THLA_STAA8 (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_00336 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.472e-16 Identity = 43/84 (51.19%), Postives = 57/84 (67.86%), Query Frame = 3 Query: 75 PEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQK 326 P + AP A+ KA+ + E S +D +E+NEAFA +LA + L L P+KVNV GGA+ALGHP+G SGAR+LVTLL L + Sbjct: 286 PSIMGIAPVGAVEKALKRSKKELSDIDVFELNEAFAAQSLAVDRELKLPPEKVNVKGGAIALGHPIGASGARVLVTLLHQLNDE 369
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: THLA_STAA3 (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_0355 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.472e-16 Identity = 43/84 (51.19%), Postives = 57/84 (67.86%), Query Frame = 3 Query: 75 PEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQK 326 P + AP A+ KA+ + E S +D +E+NEAFA +LA + L L P+KVNV GGA+ALGHP+G SGAR+LVTLL L + Sbjct: 286 PSIMGIAPVGAVEKALKRSKKELSDIDVFELNEAFAAQSLAVDRELKLPPEKVNVKGGAIALGHPIGASGARVLVTLLHQLNDE 369 The following BLAST results are available for this feature:
BLAST of CF835871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835871 ID=CF835871; Name=CF835871; organism=Citrus sinensis; type=EST; length=560bpback to top |