CF835871
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: FADA_YERPA (3-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=fadA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.775e-15 Identity = 43/91 (47.25%), Postives = 60/91 (65.93%), Query Frame = 3 Query: 75 PEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKY 338 P + P A A+ AGLE + + +E+NEAFA +LA K LGL DKVN++GGA+ALGHPLGCSGARI TLL ++ +++ ++ Sbjct: 277 PSIMGYGPVPASQLALKRAGLELADIGLFELNEAFAAQSLACLKGLGLLESMDDKVNLNGGAIALGHPLGCSGARISTTLLNLMERRDVQF 367
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: FADA_YERP3 (3-ketoacyl-CoA thiolase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=fadA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.775e-15 Identity = 43/91 (47.25%), Postives = 60/91 (65.93%), Query Frame = 3 Query: 75 PEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKY 338 P + P A A+ AGLE + + +E+NEAFA +LA K LGL DKVN++GGA+ALGHPLGCSGARI TLL ++ +++ ++ Sbjct: 277 PSIMGYGPVPASQLALKRAGLELADIGLFELNEAFAAQSLACLKGLGLLESMDDKVNLNGGAIALGHPLGCSGARISTTLLNLMERRDVQF 367
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: FADA_AERHH (3-ketoacyl-CoA thiolase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=fadA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.775e-15 Identity = 42/81 (51.85%), Postives = 55/81 (67.90%), Query Frame = 3 Query: 96 PALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNP---DKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKN 329 P A KA+ AGL +D +E+NEAFA +L K LGL +KVN++GGA+ALGHPLGCSGARI TLL ++ +K+ Sbjct: 284 PVPATQKALKRAGLTIGDIDLFELNEAFAAQSLPCVKDLGLQDVVDEKVNLNGGAIALGHPLGCSGARISTTLLNLMEEKD 364
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: FADA_PSEMY (3-ketoacyl-CoA thiolase OS=Pseudomonas mendocina (strain ymp) GN=fadA PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.625e-15 Identity = 45/92 (48.91%), Postives = 57/92 (61.96%), Query Frame = 3 Query: 57 ADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALA---NQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 323 A A P + P + KA+ AGL + +D E+NEAFA AL + KLL +KVN+HGGA+ALGHP GCSGARI TLL V++Q Sbjct: 275 AVAGVDPAIMGYGPVPSTQKALKRAGLTMADIDFVELNEAFAAQALPVLKDLKLLDKMEEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQ 366
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: FADA_PSEFR (3-ketoacyl-CoA thiolase OS=Pseudomonas fragi GN=fadA PE=1 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 3.625e-15 Identity = 45/92 (48.91%), Postives = 57/92 (61.96%), Query Frame = 3 Query: 57 ADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALA---NQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 323 A A P + P A KA+ AGL + +D E+NEAFA AL + K+L +KVN+HGGA+ALGHP GCSGARI TLL V++Q Sbjct: 275 AVAGVDPAIMGYGPVPATQKALKRAGLNMADIDFIELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQ 366
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: THIM_RAT (3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus GN=Acaa2 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.734e-15 Identity = 43/88 (48.86%), Postives = 54/88 (61.36%), Query Frame = 3 Query: 75 PEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKY 338 P + P AI A+ AGL +D ++NEAFA LA QK L L+P K NV GGA+ALGHPLG SG+RI L+ LR++ KY Sbjct: 289 PAIMGIGPVPAITGALKKAGLSLKDMDLIDVNEAFAPQFLAVQKSLDLDPSKTNVSGGAIALGHPLGGSGSRITAHLVHELRRRGGKY 376
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: THIM_MOUSE (3-ketoacyl-CoA thiolase, mitochondrial OS=Mus musculus GN=Acaa2 PE=1 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 4.734e-15 Identity = 44/106 (41.51%), Postives = 59/106 (55.66%), Query Frame = 3 Query: 75 PEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXXASALVVE 392 P + P AI A+ AGL +D ++NEAFA L+ QK L L+P K NV GGA+ALGHPLG SG+RI L+ LR++ KY AL+++ Sbjct: 289 PTIMGIGPVPAINGALKKAGLSLKDMDLIDVNEAFAPQFLSVQKALDLDPSKTNVSGGAIALGHPLGGSGSRITAHLVHELRRRGGKYAVGSACIGGGQGIALIIQ 394
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: FADA_PSEAE (3-ketoacyl-CoA thiolase OS=Pseudomonas aeruginosa GN=fadA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.734e-15 Identity = 45/92 (48.91%), Postives = 57/92 (61.96%), Query Frame = 3 Query: 57 ADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALA---NQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 323 A A P + P + KA+ AGL + +D E+NEAFA AL + KLL +KVN+HGGA+ALGHP GCSGARI TLL V++Q Sbjct: 275 AVAGVDPAIMGYGPVPSTNKALKRAGLTIADIDFVELNEAFAAQALPVLKDLKLLDKMDEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQ 366
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: FADA_PSEAB (3-ketoacyl-CoA thiolase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=fadA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.734e-15 Identity = 45/92 (48.91%), Postives = 57/92 (61.96%), Query Frame = 3 Query: 57 ADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALA---NQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 323 A A P + P + KA+ AGL + +D E+NEAFA AL + KLL +KVN+HGGA+ALGHP GCSGARI TLL V++Q Sbjct: 275 AVAGVDPAIMGYGPVPSTNKALKRAGLTIADIDFVELNEAFAAQALPVLKDLKLLDKMDEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQ 366
BLAST of CF835871 vs. ExPASy Swiss-Prot
Match: FADA_PSEA7 (3-ketoacyl-CoA thiolase OS=Pseudomonas aeruginosa (strain PA7) GN=fadA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.734e-15 Identity = 45/92 (48.91%), Postives = 57/92 (61.96%), Query Frame = 3 Query: 57 ADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALA---NQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 323 A A P + P + KA+ AGL + +D E+NEAFA AL + KLL +KVN+HGGA+ALGHP GCSGARI TLL V++Q Sbjct: 275 AVAGVDPAIMGYGPVPSTNKALKRAGLTIADIDFVELNEAFAAQALPVLKDLKLLDKMDEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQ 366 The following BLAST results are available for this feature:
BLAST of CF835871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835871 ID=CF835871; Name=CF835871; organism=Citrus sinensis; type=EST; length=560bpback to top |