CF835895
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835895 vs. ExPASy Swiss-Prot
Match: RL19_XENLA (60S ribosomal protein L19 OS=Xenopus laevis GN=rpl19 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.700e-30 Identity = 66/116 (56.90%), Postives = 84/116 (72.41%), Query Frame = -1 Query: 271 IIRKPTKIHSRSRARRMKEAKRKGRPSGYGKRKGSREARLPPKIXXXXXXXXXXXXXRKYRESKKIDKHMSHDMYMKVKGNVFKNKRVLMESIPQSKAEKAREKTLSDQFEAKRAK 618 IIRKP +HSR+R R+ A+RKGR G GKRKG+ AR+P K+ R+YRESKKID+HM H +Y+KVKGNVFKNKR+LME I + KA+KAR+K L+DQ EA+R+K Sbjct: 50 IIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKLSWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSK 165
BLAST of CF835895 vs. ExPASy Swiss-Prot
Match: RL19_ICTPU (60S ribosomal protein L19 OS=Ictalurus punctatus GN=rpl19 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.454e-29 Identity = 63/116 (54.31%), Postives = 83/116 (71.55%), Query Frame = -1 Query: 271 IIRKPTKIHSRSRARRMKEAKRKGRPSGYGKRKGSREARLPPKIXXXXXXXXXXXXXRKYRESKKIDKHMSHDMYMKVKGNVFKNKRVLMESIPQSKAEKAREKTLSDQFEAKRAK 618 II+KP +HSR+R R+ A+RKGR G GKRKG+ AR+P K+ R+YRESKKID+HM H +Y++ KGNVFKNKR+LME I + KA++AR+K LSDQ EA+R+K Sbjct: 50 IIKKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKLCWMRRMRILRRLLRRYRESKKIDRHMYHSLYLRAKGNVFKNKRILMEHIHKLKADRARKKLLSDQAEARRSK 165
BLAST of CF835895 vs. ExPASy Swiss-Prot
Match: RL19_DICDI (60S ribosomal protein L19 OS=Dictyostelium discoideum GN=rpl19 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 4.186e-29 Identity = 66/118 (55.93%), Postives = 79/118 (66.95%), Query Frame = -1 Query: 268 FIIRKPTKIHSRSRARRMKEAKRKGRPSGYGKRKGSREARLPPKIXXXXXXXXXXXXXRKYRESKKIDKHMSHDMYMKVKGNVFKNKRVLMESIPQSKAEKAREKTLSDQFEAKRAKN 621 FI+RKP +HSRSRAR AKR GR G G R G+REARLP KI +KYRE+KKIDKH ++Y+K KGNVFKNKR L+E I +SK EK REK + DQ +A+R KN Sbjct: 49 FIMRKPVVVHSRSRAREHNAAKRLGRHRGAGNRLGTREARLPSKILWIRRIRVLRRLLKKYREAKKIDKHSYRELYLKAKGNVFKNKRTLIEYIVKSKTEKLREKLIQDQAQARRNKN 166
BLAST of CF835895 vs. ExPASy Swiss-Prot
Match: RL19_DANRE (60S ribosomal protein L19 OS=Danio rerio GN=rpl19 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 7.141e-29 Identity = 62/116 (53.45%), Postives = 82/116 (70.69%), Query Frame = -1 Query: 271 IIRKPTKIHSRSRARRMKEAKRKGRPSGYGKRKGSREARLPPKIXXXXXXXXXXXXXRKYRESKKIDKHMSHDMYMKVKGNVFKNKRVLMESIPQSKAEKAREKTLSDQFEAKRAK 618 II+KP +HSR+R R+ A+RKGR G GKRKG+ AR+P K+ R+YRE+KKID+HM H +Y++ KGNVFKNKR+LME I + KA+KAR+K L+DQ EA+R K Sbjct: 50 IIKKPVTVHSRARCRKNTLARRKGRHMGVGKRKGTANARMPEKLCWMRRMRILRRLLRRYREAKKIDRHMYHSLYLRAKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRTK 165
BLAST of CF835895 vs. ExPASy Swiss-Prot
Match: RL19_CAEEL (60S ribosomal protein L19 OS=Caenorhabditis elegans GN=rpl-19 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.140e-26 Identity = 58/117 (49.57%), Postives = 80/117 (68.38%), Query Frame = -1 Query: 268 IIRKPTKIHSRSRARRMKEAKRKGRPSGYGKRKGSREARLPPKIXXXXXXXXXXXXXRKYRESKKIDKHMSHDMYMKVKGNVFKNKRVLMESIPQSKAEKAREKTLSDQFEAKRAKN 618 IIRKP +HSR RAR +EA+RKGR +GYGKR+G+ AR+P K R+YR++KK+DKH+ H++Y++ KGN FKNK+ L+E I + K E R K L+DQ +A+R KN Sbjct: 50 IIRKPVTVHSRFRAREYEEARRKGRHTGYGKRRGTANARMPEKTLWIRRMRVLRNLLRRYRDAKKLDKHLYHELYLRAKGNNFKNKKNLIEYIFKKKTENKRAKQLADQAQARRDKN 166
BLAST of CF835895 vs. ExPASy Swiss-Prot
Match: RL19_YEAST (60S ribosomal protein L19 OS=Saccharomyces cerevisiae GN=RPL19A PE=1 SV=5) HSP 1 Score: 118.627 bits (296), Expect = 2.540e-26 Identity = 57/117 (48.72%), Postives = 80/117 (68.38%), Query Frame = -1 Query: 268 IIRKPTKIHSRSRARRMKEAKRKGRPSGYGKRKGSREARLPPKIXXXXXXXXXXXXXRKYRESKKIDKHMSHDMYMKVKGNVFKNKRVLMESIPQSKAEKAREKTLSDQFEAKRAKN 618 I++K +HS+SR R ++KR+GR SGYGKRKG+REARLP ++ KYR++ KIDKH+ H +Y + KGN FK+KR L+E I Q+KA+ REK L+++ EA+R KN Sbjct: 50 IVKKAVTVHSKSRTRAHAQSKREGRHSGYGKRKGTREARLPSQVVWIRRLRVLRRLLAKYRDAGKIDKHLYHVLYKESKGNAFKHKRALVEHIIQAKADAQREKALNEEAEARRLKN 166
BLAST of CF835895 vs. ExPASy Swiss-Prot
Match: RL19B_SCHPO (60S ribosomal protein L19-B OS=Schizosaccharomyces pombe GN=rpl19b PE=2 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 3.667e-25 Identity = 57/116 (49.14%), Postives = 77/116 (66.38%), Query Frame = -1 Query: 271 IIRKPTKIHSRSRARRMKEAKRKGRPSGYGKRKGSREARLPPKIXXXXXXXXXXXXXRKYRESKKIDKHMSHDMYMKVKGNVFKNKRVLMESIPQSKAEKAREKTLSDQFEAKRAK 618 +IRKP +HSR R R+ AKR GR +GYGKRKG+ EAR+P + RKYRES KIDKH+ H +Y++ KGN FK+KR L+E I ++KAE R K + +Q +A+RA+ Sbjct: 50 VIRKPNLMHSRFRIRKTHAAKRLGRHTGYGKRKGTAEARMPSTVVWMRRQRVLRRLLRKYRESGKIDKHLYHTLYLEAKGNTFKHKRALIEHIQRAKAEANRTKLIQEQQDARRAR 165
BLAST of CF835895 vs. ExPASy Swiss-Prot
Match: RL19A_SCHPO (60S ribosomal protein L19-A OS=Schizosaccharomyces pombe GN=rpl19a PE=1 SV=3) HSP 1 Score: 114.775 bits (286), Expect = 3.667e-25 Identity = 57/116 (49.14%), Postives = 77/116 (66.38%), Query Frame = -1 Query: 271 IIRKPTKIHSRSRARRMKEAKRKGRPSGYGKRKGSREARLPPKIXXXXXXXXXXXXXRKYRESKKIDKHMSHDMYMKVKGNVFKNKRVLMESIPQSKAEKAREKTLSDQFEAKRAK 618 +IRKP +HSR R R+ AKR GR +GYGKRKG+ EAR+P + RKYRES KIDKH+ H +Y++ KGN FK+KR L+E I ++KAE R K + +Q +A+RA+ Sbjct: 50 VIRKPNLMHSRFRIRKTHAAKRLGRHTGYGKRKGTAEARMPSAVVWMRRQRVLRRLLRKYRESGKIDKHLYHTLYLEAKGNTFKHKRALIEHIQRAKAEANRTKLIQEQQDARRAR 165 The following BLAST results are available for this feature:
BLAST of CF835895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835895 ID=CF835895; Name=CF835895; organism=Citrus sinensis; type=EST; length=621bpback to top |