CF835897
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835897 vs. ExPASy Swiss-Prot
Match: RL19_XENLA (60S ribosomal protein L19 OS=Xenopus laevis GN=rpl19 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.718e-35 Identity = 73/120 (60.83%), Postives = 89/120 (74.17%), Query Frame = -1 Query: 348 KDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIPKSKAEKAREKTLSDQFEAKRAK 707 KDG IIRKP +HSR+R R+ A+RKGRH G GKRKGT AR+P K+ R+YRESKKID+HMYH +Y+KVKGNVFKNKR+LME I K KA+KAR+K L+DQ EA+R+K Sbjct: 46 KDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKLSWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSK 165
BLAST of CF835897 vs. ExPASy Swiss-Prot
Match: RL19_ICTPU (60S ribosomal protein L19 OS=Ictalurus punctatus GN=rpl19 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.481e-34 Identity = 70/120 (58.33%), Postives = 88/120 (73.33%), Query Frame = -1 Query: 348 KDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIPKSKAEKAREKTLSDQFEAKRAK 707 KDG II+KP +HSR+R R+ A+RKGRH G GKRKGT AR+P K+ R+YRESKKID+HMYH +Y++ KGNVFKNKR+LME I K KA++AR+K LSDQ EA+R+K Sbjct: 46 KDGLIIKKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKLCWMRRMRILRRLLRRYRESKKIDRHMYHSLYLRAKGNVFKNKRILMEHIHKLKADRARKKLLSDQAEARRSK 165
BLAST of CF835897 vs. ExPASy Swiss-Prot
Match: RL19_DANRE (60S ribosomal protein L19 OS=Danio rerio GN=rpl19 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 7.219e-34 Identity = 69/120 (57.50%), Postives = 87/120 (72.50%), Query Frame = -1 Query: 348 KDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIPKSKAEKAREKTLSDQFEAKRAK 707 KDG II+KP +HSR+R R+ A+RKGRH G GKRKGT AR+P K+ R+YRE+KKID+HMYH +Y++ KGNVFKNKR+LME I K KA+KAR+K L+DQ EA+R K Sbjct: 46 KDGLIIKKPVTVHSRARCRKNTLARRKGRHMGVGKRKGTANARMPEKLCWMRRMRILRRLLRRYREAKKIDRHMYHSLYLRAKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRTK 165
BLAST of CF835897 vs. ExPASy Swiss-Prot
Match: RL19_DICDI (60S ribosomal protein L19 OS=Dictyostelium discoideum GN=rpl19 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.679e-33 Identity = 71/119 (59.66%), Postives = 83/119 (69.75%), Query Frame = -1 Query: 345 GFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIPKSKAEKAREKTLSDQFEAKRAKN 701 GFI+RKP +HSRSRAR AKR GRH G G R GTREARLP+KI +KYRE+KKIDKH Y ++Y+K KGNVFKNKR L+E I KSK EK REK + DQ +A+R KN Sbjct: 48 GFIMRKPVVVHSRSRAREHNAAKRLGRHRGAGNRLGTREARLPSKILWIRRIRVLRRLLKKYREAKKIDKHSYRELYLKAKGNVFKNKRTLIEYIVKSKTEKLREKLIQDQAQARRNKN 166
BLAST of CF835897 vs. ExPASy Swiss-Prot
Match: RL19_CAEEL (60S ribosomal protein L19 OS=Caenorhabditis elegans GN=rpl-19 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.380e-31 Identity = 64/120 (53.33%), Postives = 84/120 (70.00%), Query Frame = -1 Query: 345 DGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIPKSKAEKAREKTLSDQFEAKRAKN 704 DG IIRKP +HSR RAR +EA+RKGRH+GYGKR+GT AR+P K R+YR++KK+DKH+YH++Y++ KGN FKNK+ L+E I K K E R K L+DQ +A+R KN Sbjct: 47 DGLIIRKPVTVHSRFRAREYEEARRKGRHTGYGKRRGTANARMPEKTLWIRRMRVLRNLLRRYRDAKKLDKHLYHELYLRAKGNNFKNKKNLIEYIFKKKTENKRAKQLADQAQARRDKN 166
BLAST of CF835897 vs. ExPASy Swiss-Prot
Match: RL19B_SCHPO (60S ribosomal protein L19-B OS=Schizosaccharomyces pombe GN=rpl19b PE=2 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 4.842e-30 Identity = 63/120 (52.50%), Postives = 83/120 (69.17%), Query Frame = -1 Query: 348 KDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIPKSKAEKAREKTLSDQFEAKRAK 707 KDG +IRKP +HSR R R+ AKR GRH+GYGKRKGT EAR+P+ + RKYRES KIDKH+YH +Y++ KGN FK+KR L+E I ++KAE R K + +Q +A+RA+ Sbjct: 46 KDGLVIRKPNLMHSRFRIRKTHAAKRLGRHTGYGKRKGTAEARMPSTVVWMRRQRVLRRLLRKYRESGKIDKHLYHTLYLEAKGNTFKHKRALIEHIQRAKAEANRTKLIQEQQDARRAR 165
BLAST of CF835897 vs. ExPASy Swiss-Prot
Match: RL19A_SCHPO (60S ribosomal protein L19-A OS=Schizosaccharomyces pombe GN=rpl19a PE=1 SV=3) HSP 1 Score: 131.339 bits (329), Expect = 4.842e-30 Identity = 63/120 (52.50%), Postives = 83/120 (69.17%), Query Frame = -1 Query: 348 KDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIPKSKAEKAREKTLSDQFEAKRAK 707 KDG +IRKP +HSR R R+ AKR GRH+GYGKRKGT EAR+P+ + RKYRES KIDKH+YH +Y++ KGN FK+KR L+E I ++KAE R K + +Q +A+RA+ Sbjct: 46 KDGLVIRKPNLMHSRFRIRKTHAAKRLGRHTGYGKRKGTAEARMPSAVVWMRRQRVLRRLLRKYRESGKIDKHLYHTLYLEAKGNTFKHKRALIEHIQRAKAEANRTKLIQEQQDARRAR 165
BLAST of CF835897 vs. ExPASy Swiss-Prot
Match: RL19_YEAST (60S ribosomal protein L19 OS=Saccharomyces cerevisiae GN=RPL19A PE=1 SV=5) HSP 1 Score: 130.568 bits (327), Expect = 8.260e-30 Identity = 61/121 (50.41%), Postives = 86/121 (71.07%), Query Frame = -1 Query: 345 KDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIPKSKAEKAREKTLSDQFEAKRAKN 707 K+G I++K +HS+SR R ++KR+GRHSGYGKRKGTREARLP+++ KYR++ KIDKH+YH +Y + KGN FK+KR L+E I ++KA+ REK L+++ EA+R KN Sbjct: 46 KNGTIVKKAVTVHSKSRTRAHAQSKREGRHSGYGKRKGTREARLPSQVVWIRRLRVLRRLLAKYRDAGKIDKHLYHVLYKESKGNAFKHKRALVEHIIQAKADAQREKALNEEAEARRLKN 166
BLAST of CF835897 vs. ExPASy Swiss-Prot
Match: RL19_PYRAB (50S ribosomal protein L19e OS=Pyrococcus abyssi GN=rpl19e PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.669e-12 Identity = 42/106 (39.62%), Postives = 55/106 (51.89%), Query Frame = -1 Query: 390 KDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIPKSKAEKAR 707 K+G I +KP K SR RAR E K+KGRH G G RKG + AR+ K RK +E KKID+ Y +Y++ KG FK+K L + + K R Sbjct: 46 KEGVIKKKPVKGQSRYRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTYRMLYIRAKGGQFKSKHQLYMFLEEHNLLKKR 151
BLAST of CF835897 vs. ExPASy Swiss-Prot
Match: RL19_PYRHO (50S ribosomal protein L19e OS=Pyrococcus horikoshii GN=rpl19e PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.553e-12 Identity = 40/93 (43.01%), Postives = 51/93 (54.84%), Query Frame = -1 Query: 429 KDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVL 707 K+G I +KP + SR RAR E K+KGRH G G RKG + AR+ K RK +E KKID+ Y +Y++ KG FKNK L Sbjct: 46 KEGVIRKKPIEGQSRYRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRRELRKLKEQKKIDRKTYRMLYIRAKGGQFKNKHQL 138 The following BLAST results are available for this feature:
BLAST of CF835897 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835897 ID=CF835897; Name=CF835897; organism=Citrus sinensis; type=EST; length=707bpback to top |