CF835907
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835907 vs. ExPASy Swiss-Prot
Match: MDH_BURCA (Malate dehydrogenase OS=Burkholderia cenocepacia (strain AU 1054) GN=mdh PE=3 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 1.921e-52 Identity = 105/200 (52.50%), Postives = 135/200 (67.50%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHAT 677 MAK RV VTGAAGQI Y+L+ IA G +LG DQPVIL +LD+P A A+ GV MEL D AFPL+ GVV T D A ++A++VG PR +GMERKD++S N I+ Q +AL + A+ + KVLVV NPANTNA I + AP +P KN T + RLDHNRAL Q++ K V+ ++ + +WGNHS + YPD AT Sbjct: 1 MAKPAKRVAVTGAAGQIAYSLLFRIANGDLLGKDQPVILQLLDLPQAQGAVKGVVMELDDCAFPLLAGVVITDDPKVAFKDADVALLVGARPRSKGMERKDLLSANAEIFTVQGAALNEVASRDVKVLVVGNPANTNAYIAMKSAPDLPKKNFTAMLRLDHNRALSQLAAKSGKPVASIEKLAVWGNHSPTMYPDFRFAT 200
BLAST of CF835907 vs. ExPASy Swiss-Prot
Match: MDH_BURPP (Malate dehydrogenase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=mdh PE=3 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.509e-52 Identity = 105/200 (52.50%), Postives = 134/200 (67.00%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHAT 677 MAK RV VTGAAGQI Y+L+ IA G +LG DQPVIL +LD+P A A+ GV MEL D AFPL+ GVV T D A ++A++VG PR +GMERKD++S N I+ Q AL + A+ + KVLVV NPANTNA I + AP +P KN T + RLDHNRAL Q++ K V+ ++ + +WGNHS + YPD AT Sbjct: 1 MAKPAKRVAVTGAAGQIAYSLLFRIANGDLLGKDQPVILQLLDLPQAQGAVKGVVMELDDCAFPLLSGVVITDDPEVAFKDADVALLVGARPRSKGMERKDLLSANAEIFTVQGKALNKVASRDVKVLVVGNPANTNAYIAMKSAPDLPKKNFTAMLRLDHNRALSQLAAKSGKPVASIEKLAVWGNHSPTMYPDFRFAT 200
BLAST of CF835907 vs. ExPASy Swiss-Prot
Match: MDH_ACIBY (Malate dehydrogenase OS=Acinetobacter baumannii (strain AYE) GN=mdh PE=3 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.509e-52 Identity = 106/202 (52.48%), Postives = 137/202 (67.82%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 683 K+PVRV VTGAAGQIGY+L+ IA G MLG DQPVIL +L++P A +AL GV MEL D AFPL+ G++ T D A + A++VG PR GMER D++ N I+ Q AL + A+ + KVLVV NPANTNA I + AP +PAKN T + RLDHNRAL Q+++K V V+D++ + +WGNHS + Y D AT N Sbjct: 2 KQPVRVAVTGAAGQIGYSLLFRIASGEMLGKDQPVILQLLEVPVEKAQQALKGVMMELDDCAFPLLAGMIGTDDPKVAFKDADYALLVGSRPRGPGMERADLLKVNGEIFIGQGQALNEVASRDVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLRLDHNRALTQVAQKAGVAVADIEKLTVWGNHSPTMYADYRFATAN 203
BLAST of CF835907 vs. ExPASy Swiss-Prot
Match: MDH_ACIBT (Malate dehydrogenase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=mdh PE=3 SV=2) HSP 1 Score: 205.297 bits (521), Expect = 2.509e-52 Identity = 106/202 (52.48%), Postives = 137/202 (67.82%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 683 K+PVRV VTGAAGQIGY+L+ IA G MLG DQPVIL +L++P A +AL GV MEL D AFPL+ G++ T D A + A++VG PR GMER D++ N I+ Q AL + A+ + KVLVV NPANTNA I + AP +PAKN T + RLDHNRAL Q+++K V V+D++ + +WGNHS + Y D AT N Sbjct: 2 KQPVRVAVTGAAGQIGYSLLFRIASGEMLGKDQPVILQLLEVPVEKAQQALKGVMMELDDCAFPLLAGMIGTDDPKVAFKDADYALLVGSRPRGPGMERADLLKVNGEIFIGQGQALNEVASRDVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLRLDHNRALTQVAQKAGVAVADIEKLTVWGNHSPTMYADYRFATAN 203
BLAST of CF835907 vs. ExPASy Swiss-Prot
Match: MDH_ACIBC (Malate dehydrogenase OS=Acinetobacter baumannii (strain ACICU) GN=mdh PE=3 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.509e-52 Identity = 106/202 (52.48%), Postives = 137/202 (67.82%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 683 K+PVRV VTGAAGQIGY+L+ IA G MLG DQPVIL +L++P A +AL GV MEL D AFPL+ G++ T D A + A++VG PR GMER D++ N I+ Q AL + A+ + KVLVV NPANTNA I + AP +PAKN T + RLDHNRAL Q+++K V V+D++ + +WGNHS + Y D AT N Sbjct: 2 KQPVRVAVTGAAGQIGYSLLFRIASGEMLGKDQPVILQLLEVPVEKAQQALKGVMMELDDCAFPLLAGMIGTDDPKVAFKDADYALLVGSRPRGPGMERADLLKVNGEIFIGQGQALNEVASRDVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLRLDHNRALTQVAQKAGVAVADIEKLTVWGNHSPTMYADYRFATAN 203
BLAST of CF835907 vs. ExPASy Swiss-Prot
Match: MDH_ACIB5 (Malate dehydrogenase OS=Acinetobacter baumannii (strain AB0057) GN=mdh PE=3 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.509e-52 Identity = 106/202 (52.48%), Postives = 137/202 (67.82%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 683 K+PVRV VTGAAGQIGY+L+ IA G MLG DQPVIL +L++P A +AL GV MEL D AFPL+ G++ T D A + A++VG PR GMER D++ N I+ Q AL + A+ + KVLVV NPANTNA I + AP +PAKN T + RLDHNRAL Q+++K V V+D++ + +WGNHS + Y D AT N Sbjct: 2 KQPVRVAVTGAAGQIGYSLLFRIASGEMLGKDQPVILQLLEVPVEKAQQALKGVMMELDDCAFPLLAGMIGTDDPKVAFKDADYALLVGSRPRGPGMERADLLKVNGEIFIGQGQALNEVASRDVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLRLDHNRALTQVAQKAGVAVADIEKLTVWGNHSPTMYADYRFATAN 203
BLAST of CF835907 vs. ExPASy Swiss-Prot
Match: MDH_ACIB3 (Malate dehydrogenase OS=Acinetobacter baumannii (strain AB307-0294) GN=mdh PE=3 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.509e-52 Identity = 106/202 (52.48%), Postives = 137/202 (67.82%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 683 K+PVRV VTGAAGQIGY+L+ IA G MLG DQPVIL +L++P A +AL GV MEL D AFPL+ G++ T D A + A++VG PR GMER D++ N I+ Q AL + A+ + KVLVV NPANTNA I + AP +PAKN T + RLDHNRAL Q+++K V V+D++ + +WGNHS + Y D AT N Sbjct: 2 KQPVRVAVTGAAGQIGYSLLFRIASGEMLGKDQPVILQLLEVPVEKAQQALKGVMMELDDCAFPLLAGMIGTDDPKVAFKDADYALLVGSRPRGPGMERADLLKVNGEIFIGQGQALNEVASRDVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLRLDHNRALTQVAQKAGVAVADIEKLTVWGNHSPTMYADYRFATAN 203
BLAST of CF835907 vs. ExPASy Swiss-Prot
Match: MDH_XANCP (Malate dehydrogenase OS=Xanthomonas campestris pv. campestris GN=mdh PE=3 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 3.277e-52 Identity = 109/204 (53.43%), Postives = 138/204 (67.65%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTA 689 K PVRV VTGAAGQIGYAL+ IA G MLG DQPVIL +L++ A AL GV MEL D AFPL+ G+V T DA A +++A++VG PR GMERKD++ +N I+ AQ +AL + A + KVLVV NPANTNA I + AP + KN T + RLDHNRAL Q+S KL V ++ +++WGNHS + YPD AT + A Sbjct: 2 KAPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLELSNEKAQAALKGVMMELEDCAFPLLAGMVGTDDAEVAFKDIDVALLVGARPRGPGMERKDLLLENAKIFTAQGAALNKVAKRDVKVLVVGNPANTNAYIAMKSAPDLNPKNFTAMLRLDHNRALSQLSLKLGKPVGGIEKLVVWGNHSPTMYPDYRFATSDGA 205
BLAST of CF835907 vs. ExPASy Swiss-Prot
Match: MDH_XANC8 (Malate dehydrogenase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=mdh PE=3 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 3.277e-52 Identity = 109/204 (53.43%), Postives = 138/204 (67.65%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTA 689 K PVRV VTGAAGQIGYAL+ IA G MLG DQPVIL +L++ A AL GV MEL D AFPL+ G+V T DA A +++A++VG PR GMERKD++ +N I+ AQ +AL + A + KVLVV NPANTNA I + AP + KN T + RLDHNRAL Q+S KL V ++ +++WGNHS + YPD AT + A Sbjct: 2 KAPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLELSNEKAQAALKGVMMELEDCAFPLLAGMVGTDDAEVAFKDIDVALLVGARPRGPGMERKDLLLENAKIFTAQGAALNKVAKRDVKVLVVGNPANTNAYIAMKSAPDLNPKNFTAMLRLDHNRALSQLSLKLGKPVGGIEKLVVWGNHSPTMYPDYRFATSDGA 205
BLAST of CF835907 vs. ExPASy Swiss-Prot
Match: MDH_COXBN (Malate dehydrogenase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=mdh PE=3 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 3.277e-52 Identity = 108/202 (53.47%), Postives = 135/202 (66.83%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 683 MAK V+V VTGAAGQIGYAL+ +A G G D V LH+L+I PA AL GV EL D AFPL+ +V T+D A VN A++VG PRK GMERKD++ KN SI+ Q A+ ++AA + ++ VV NP NTN LI AP IP +TRLD NRA+GQ++ K V V VKN+IIWGNHSS+QYPD HAT++ Sbjct: 1 MAKH-VKVAVTGAAGQIGYALLFRLASGQAFGLDTTVDLHLLEIEPALPALKGVVTELEDCAFPLLCNMVVTSDPRVAFNDVNWALLVGAAPRKAGMERKDLLEKNGSIFAGQGKAINENAASDVRIFVVGNPCNTNCLIAMNNAPDIPKDRFYAMTRLDQNRAIGQLALKAGVDVPSVKNMIIWGNHSSTQYPDFYHATID 201 The following BLAST results are available for this feature:
BLAST of CF835907 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 210
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835907 ID=CF835907; Name=CF835907; organism=Citrus sinensis; type=EST; length=691bpback to top |