CF835907
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835907 vs. ExPASy Swiss-Prot
Match: MDH_XYLFT (Malate dehydrogenase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=mdh PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 4.429e-49 Identity = 104/202 (51.49%), Postives = 135/202 (66.83%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 683 K VRV VTGAAGQIGY+L+ IA G M G D+PVIL ML++P A AL GV MEL D AFPL+ G+V T + A + A++VG PR GMERKD++ +N I+ AQ +AL + A + KVLVV NPANTNA I + AP + K+ T + RLDHNRAL Q+S KL V++++ +I+WGNHS + YPD AT + Sbjct: 2 KALVRVAVTGAAGQIGYSLLFRIAAGEMFGKDRPVILQMLELPDEKAQAALKGVMMELEDCAFPLLAGMVVTDNPDIAFKDADAALLVGSRPRGPGMERKDLLMENAKIFTAQGAALNKVARRDVKVLVVGNPANTNAYIAMKSAPDLNPKHFTAMLRLDHNRALSQLSTKLGKPVANIEKLIVWGNHSPTMYPDYRFATAD 203
BLAST of CF835907 vs. ExPASy Swiss-Prot
Match: MDH_XYLF2 (Malate dehydrogenase OS=Xylella fastidiosa (strain M23) GN=mdh PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 4.429e-49 Identity = 104/202 (51.49%), Postives = 135/202 (66.83%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 683 K VRV VTGAAGQIGY+L+ IA G M G D+PVIL ML++P A AL GV MEL D AFPL+ G+V T + A + A++VG PR GMERKD++ +N I+ AQ +AL + A + KVLVV NPANTNA I + AP + K+ T + RLDHNRAL Q+S KL V++++ +I+WGNHS + YPD AT + Sbjct: 2 KALVRVAVTGAAGQIGYSLLFRIAAGEMFGKDRPVILQMLELPDEKAQAALKGVMMELEDCAFPLLAGMVVTDNPDIAFKDADAALLVGSRPRGPGMERKDLLMENAKIFTAQGAALNKVARRDVKVLVVGNPANTNAYIAMKSAPDLNPKHFTAMLRLDHNRALSQLSTKLGKPVANIEKLIVWGNHSPTMYPDYRFATAD 203
BLAST of CF835907 vs. ExPASy Swiss-Prot
Match: MDH_LARHH (Malate dehydrogenase OS=Laribacter hongkongensis (strain HLHK9) GN=mdh PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 4.429e-49 Identity = 103/202 (50.99%), Postives = 135/202 (66.83%), Query Frame = 3 Query: 90 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSI----PAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 683 PVRV VTGAAGQIGY+L+ IA G MLG +QPVIL +LD+P A A+ GV MEL D AFPL+ G+VAT D A +I ++VG PR +GMER D++ N +I+ Q A+ ++A + KVLVV NPANTNA I ++ A + PA N T + RLDHNRAL Q++ K V+ ++N+ +WGNHS + Y D ATVN Sbjct: 4 PVRVAVTGAAGQIGYSLLFRIASGEMLGQNQPVILQLLDLPQAQNAVKGVMMELEDCAFPLLAGMVATDDPNVAFKDADICLLVGARPRSKGMERADLLEANGAIFTVQGKAIAENAKEDVKVLVVGNPANTNAYIARKAAEKVGRTNPA-NYTAMLRLDHNRALSQLAAKTGKAVASIENMAVWGNHSPTMYADYRFATVN 204
BLAST of CF835907 vs. ExPASy Swiss-Prot
Match: MDH_SYNFM (Malate dehydrogenase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=mdh PE=1 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 5.784e-49 Identity = 100/204 (49.02%), Postives = 134/204 (65.69%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 683 MAK+PVRV VTGAAGQIGYAL+ +A G MLG DQP+IL ML++P AL GV MEL D AFPL+ ++ T D A + A++VG PR GMERKD++ +N I+ Q A+ A+ + +V+VV NPANTNA I + AP +P N T + RLDHNRA Q++ + V+ V+ +I+WGNHS + YPD+ TV+ Sbjct: 1 MAKKPVRVTVTGAAGQIGYALLFRVASGQMLGPDQPIILQMLELPIDKVQAALKGVMMELEDCAFPLLADMIGTGDPKVAFKDSDYALLVGARPRGPGMERKDLLLENAKIFIEQGKAMNAVASRDIRVIVVGNPANTNAWIAMKSAPDLPKGNFTAMLRLDHNRAKSQLATRTGKPVASVEKMIVWGNHSPTMYPDIRFCTVD 204
BLAST of CF835907 vs. ExPASy Swiss-Prot
Match: MDH_KOCRD (Malate dehydrogenase OS=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) GN=mdh PE=3 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 5.784e-49 Identity = 100/201 (49.75%), Postives = 132/201 (65.67%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATV 680 M+ PV V VTGAAGQIGY+L+ IA G MLG +PV L +L+IP A AL G MEL D AFPL+ V +D E G +A++VG PR +GMER D++ N +I+ Q AL A + +V+V NPANTNALI + AP IPA + LTRLDHNRA+ ++ + V DVK++ +WGNHS++QYPD++HA V Sbjct: 1 MSLTPVTVAVTGAAGQIGYSLLFRIAHGDMLGRQRPVRLRLLEIPSALPALEGTVMELQDCAFPLLADVEIGSDPREVFDGAQLALLVGARPRTKGMERGDLLEANGAIFTEQGRALNDVADHDVRVVVTGNPANTNALIAQRNAPDIPASRFSALTRLDHNRAVAMLAAQTGASVDDVKHLSVWGNHSATQYPDLDHARV 201
BLAST of CF835907 vs. ExPASy Swiss-Prot
Match: MDH_CORGB (Malate dehydrogenase OS=Corynebacterium glutamicum (strain R) GN=mdh PE=3 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 5.784e-49 Identity = 94/195 (48.21%), Postives = 131/195 (67.18%), Query Frame = 3 Query: 96 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATV 680 +V VTGAAGQI Y+L+ IA G + GT+ PV L +L+IP A GV MEL+D+AFPL++ + T DA EA G N A +VG PR +G ER D+++ N I+ Q A+ +AA + +VLVV NPANTNALI AP +PA + RLDHNRA+ Q++ KL ++ N+++WGNHS++Q+PD+ +ATV Sbjct: 11 KVTVTGAAGQISYSLLWRIANGEVFGTETPVELKLLEIPQALGGAEGVAMELLDSAFPLLRNITITADANEAFDGANAAFLVGAKPRGKGEERADLLANNGKIFGPQGKAINDNAADDIRVLVVGNPANTNALIASAAAPDVPASRFNAMMRLDHNRAISQLATKLGRGSAEFNNIVVWGNHSATQFPDITYATV 205
BLAST of CF835907 vs. ExPASy Swiss-Prot
Match: MDH_RUBXD (Malate dehydrogenase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=mdh PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.289e-48 Identity = 94/194 (48.45%), Postives = 130/194 (67.01%), Query Frame = 3 Query: 99 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATV 680 V VTGAAG IGYA++ IA G MLG DQ + L +L+I PA +A G MEL D AFPL++ V T D EA G N+ +++G PR+ GMER D++ N I+K Q A+ HAA + +VLVV NPANTN LI AP +P + + +TRLD NRA+ +++KL V V DV+++++WGNHS + +PD+ +A V Sbjct: 5 VTVTGAAGAIGYAILFRIASGQMLGPDQKLRLKLLEIEPALKAAEGTAMELYDCAFPLLEAVDITADPKEAFDGANVCLLIGARPRQRGMERADLLEANGQIFKPQGRAINDHAADDVRVLVVGNPANTNCLIAMNNAPDVPRERFSAMTRLDENRAVSMLAQKLGVGVEDVRDLVVWGNHSPTMFPDLFNARV 198
BLAST of CF835907 vs. ExPASy Swiss-Prot
Match: MDH_XYLFM (Malate dehydrogenase OS=Xylella fastidiosa (strain M12) GN=mdh PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.871e-48 Identity = 103/202 (50.99%), Postives = 135/202 (66.83%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 683 K VRV VTGAAGQIGY+L+ IA G M G D+ VIL ML++P A AL GV MEL D AFPL+ G+V T + A + A++VG PR GMERKD++ +N I+ AQ +AL + A + KVLVV NPANTNA I + AP + K+ T + RLDHNRAL Q+S KL+ V++++ +I+WGNHS + YPD AT + Sbjct: 2 KALVRVAVTGAAGQIGYSLLFRIAAGEMFGKDRSVILQMLELPDEKAQAALKGVMMELEDCAFPLLAGMVVTDNPDIAFKDADAALLVGSRPRGPGMERKDLLMENAKIFTAQGAALNKVARRDVKVLVVGNPANTNAYIAMKSAPDLNPKHFTAMLRLDHNRALSQLSTKLSKPVANIEKLIVWGNHSPTMYPDYRFATAD 203
BLAST of CF835907 vs. ExPASy Swiss-Prot
Match: MDH_PROAC (Malate dehydrogenase OS=Propionibacterium acnes GN=mdh PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 8.352e-48 Identity = 103/201 (51.24%), Postives = 132/201 (65.67%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATV 680 M + PV++ VTGAAGQI Y+L+ IA G +LG D P+ L +L+I PA +AL GV MEL D AF + + D + GVN A +VG PRK GMER D+++KN +I+ AQ AL AA + +VLV NPANTNALI A IP + LTRLDHNRA Q++ K V+DV+++ IWGNHSS+QYPDV HA V Sbjct: 1 MTQTPVKIAVTGAAGQICYSLLFRIASGSLLG-DTPIELRLLEITPALKALEGVVMELDDCAFGNLVNIEIGDDPKKVFDGVNAAFLVGAMPRKAGMERSDLLTKNGAIFTAQGKALNDVAADDVRVLVTGNPANTNALIAATNAVDIPNNHFAALTRLDHNRAKTQLARKTGKTVNDVRHMTIWGNHSSTQYPDVFHAEV 200
BLAST of CF835907 vs. ExPASy Swiss-Prot
Match: MDH_CORDI (Malate dehydrogenase OS=Corynebacterium diphtheriae GN=mdh PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 2.430e-47 Identity = 94/201 (46.77%), Postives = 130/201 (64.68%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATV 680 M + ++ VTGAAGQI Y+L+ IA G + G + PV L +L+IP A GV MEL+D+AFPL+K +V T A A G N A +VG PR +G ER D+++ N I+ Q AL +AA + +VLVV NPANTNALI + A IPA + RLDHNR + Q+SEKL +D++ ++WGNHS+ Q+PD+ +AT+ Sbjct: 1 MTESVKKIAVTGAAGQIAYSLLWRIANGDVYGKNTPVELQLLEIPQAIGGAEGVAMELLDSAFPLLKNIVVTDKAEVAFDGTNAAFLVGAKPRGKGEERADLLTANGKIFGPQGKALNDNAADDIRVLVVGNPANTNALIAQHAAKDIPADRFNAMMRLDHNRGIAQLSEKLGRDKNDIEKFVVWGNHSAGQFPDITYATI 201 The following BLAST results are available for this feature:
BLAST of CF835907 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 210
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835907 ID=CF835907; Name=CF835907; organism=Citrus sinensis; type=EST; length=691bpback to top |