CF835907
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835907 vs. ExPASy Swiss-Prot
Match: MDH1_RHOFD (Malate dehydrogenase 1 OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=mdh1 PE=3 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.737e-53 Identity = 107/204 (52.45%), Postives = 142/204 (69.61%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 683 M+K+PVRV VTGAAGQIGYA++ IA G MLG DQPVIL +L++P A +AL GV MEL D AFPL+ G+ A +D + A V+ A+++G PR GMER ++++ N +I+ AQ AL A+ N KVLVV NPANTNA I + AP +PAKN T + RLDHNRAL Q++ K V+D++ + +WGNHS + Y D AT+N Sbjct: 1 MSKKPVRVAVTGAAGQIGYAILFRIASGEMLGKDQPVILQLLEVPVEKAQQALQGVMMELQDCAFPLLAGMEAHSDPMTAFKDVDYALLIGSRPRGPGMERAELLAVNGAIFTAQGKALNAVASRNVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLRLDHNRALSQLASKTGKAVADIEKMAVWGNHSPTMYADYRFATIN 204
BLAST of CF835907 vs. ExPASy Swiss-Prot
Match: MDH_XANC5 (Malate dehydrogenase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=mdh PE=3 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 2.269e-53 Identity = 112/204 (54.90%), Postives = 138/204 (67.65%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTA 689 K PVRV VTGAAGQIGYAL+ IA G MLG DQPVIL +L++P A AL GV MEL D AFPL+ G+V T DA A V+IA++VG PR GMERKD++ N I+ AQ +AL + A + KVLVV NPANTNA I + AP + KN T + RLDHNRAL Q+S KL V+ ++ + +WGNHS + YPD AT + A Sbjct: 2 KAPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLELPIEKAQAALKGVMMELEDCAFPLLAGMVGTDDAEVAFKDVDIALLVGSRPRGPGMERKDLLLANAEIFTAQGAALNKVAKRDVKVLVVGNPANTNAYIAMKSAPDLDPKNFTAMLRLDHNRALSQLSAKLGKPVAGIEKLAVWGNHSPTMYPDYRFATADGA 205
BLAST of CF835907 vs. ExPASy Swiss-Prot
Match: MDH_XANAC (Malate dehydrogenase OS=Xanthomonas axonopodis pv. citri GN=mdh PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 2.964e-53 Identity = 111/204 (54.41%), Postives = 138/204 (67.65%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTA 689 K PVRV VTGAAGQIGYAL+ IA G MLG DQPVIL +L++P A AL GV MEL D AFPL+ G+V T DA A V++A++VG PR GMERKD++ N I+ AQ +AL + A + KVLVV NPANTNA I + AP + KN T + RLDHNRAL Q+S KL V+ ++ + +WGNHS + YPD AT + A Sbjct: 2 KAPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLELPIEKAQAALKGVMMELEDCAFPLLAGMVGTDDAEVAFKDVDVALLVGSRPRGPGMERKDLLLANAEIFTAQGAALNKVAKRDVKVLVVGNPANTNAYIAMKSAPDLDPKNFTAMLRLDHNRALSQLSAKLGKPVAGIEKLAVWGNHSPTMYPDYRFATADGA 205
BLAST of CF835907 vs. ExPASy Swiss-Prot
Match: MDH_DIAST (Malate dehydrogenase OS=Diaphorobacter sp. (strain TPSY) GN=mdh PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 2.964e-53 Identity = 110/204 (53.92%), Postives = 138/204 (67.65%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 683 M+K+PVRV VTGAAGQIGYAL+ IA G MLG DQPVIL +L+IP A AL GV MEL D AFPL+ G+ A +D + A + A++VG PR GMER D+++ N I+ AQ AL A+ N KVLVV NPANTNA I + AP +PAKN T + RLDHNRA Q++ K +V D+K + +WGNHS + Y D ATV+ Sbjct: 1 MSKKPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEIPDEKAQNALKGVIMELEDCAFPLLAGIEAHSDPMTAFKDTDYALLVGARPRGPGMERADLLAANAQIFTAQGKALNAVASRNVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLRLDHNRAASQLAAKGGFKVGDIKKLTVWGNHSPTMYADYRFATVD 204
BLAST of CF835907 vs. ExPASy Swiss-Prot
Match: MDH_ACISJ (Malate dehydrogenase OS=Acidovorax sp. (strain JS42) GN=mdh PE=3 SV=2) HSP 1 Score: 208.379 bits (529), Expect = 2.964e-53 Identity = 110/204 (53.92%), Postives = 138/204 (67.65%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 683 M+K+PVRV VTGAAGQIGYAL+ IA G MLG DQPVIL +L+IP A AL GV MEL D AFPL+ G+ A +D + A + A++VG PR GMER D+++ N I+ AQ AL A+ N KVLVV NPANTNA I + AP +PAKN T + RLDHNRA Q++ K +V D+K + +WGNHS + Y D ATV+ Sbjct: 1 MSKKPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEIPDEKAQNALKGVIMELEDCAFPLLAGIEAHSDPMTAFKDTDYALLVGARPRGPGMERADLLAANAQIFTAQGKALNAVASRNVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLRLDHNRAASQLAAKGGFKVGDIKKLTVWGNHSPTMYADYRFATVD 204
BLAST of CF835907 vs. ExPASy Swiss-Prot
Match: MDH_JANMA (Malate dehydrogenase OS=Janthinobacterium sp. (strain Marseille) GN=mdh PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 3.871e-53 Identity = 107/204 (52.45%), Postives = 141/204 (69.12%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 683 MAK P+RV VTGAAGQIGY+L+ IA G +LG DQPVIL +L+I A +AL GV ME+ D AFPL+ GV A +D + A ++A++VG PR GMERKD++ N I+ Q AL+ A+ N KVLVV NPANTNA I + AP++PAKN T + RLDHNRAL QI+ K++ V+ ++ + +WGNHS + YPD AT + Sbjct: 1 MAKAPMRVAVTGAAGQIGYSLLFRIANGDLLGKDQPVILQLLEIADEKAQKALKGVIMEIDDCAFPLLAGVTAHSDPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKALDAVASRNVKVLVVGNPANTNAYIAMKSAPNLPAKNFTAMLRLDHNRALSQIAAKISKPVTSIEKLTVWGNHSPTMYPDYRFATAD 204
BLAST of CF835907 vs. ExPASy Swiss-Prot
Match: MDH_STRMK (Malate dehydrogenase OS=Stenotrophomonas maltophilia (strain K279a) GN=mdh PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 5.055e-53 Identity = 110/204 (53.92%), Postives = 139/204 (68.14%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTA 689 K PVRV VTGAAGQIGYAL+ IA G MLG DQPVIL +L++P A AL GV MEL D AFPL+ G+V T DA A +IA++VG PR GMERKD++ +N I+ AQ +AL + A+ + KVLVV NPANTNA I + AP + +N T + RLDHNRAL Q+S KL V ++ +++WGNHS + YPD AT + A Sbjct: 2 KAPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLELPVDKAQAALKGVMMELEDCAFPLLAGMVGTDDAEVAFKDADIALLVGARPRGPGMERKDLLLENAKIFTAQGAALNKVASRDVKVLVVGNPANTNAYIAMKSAPDLKPENFTAMLRLDHNRALSQLSTKLGKPVGGMEKLVVWGNHSPTMYPDYRFATADGA 205
BLAST of CF835907 vs. ExPASy Swiss-Prot
Match: MDH_STRM5 (Malate dehydrogenase OS=Stenotrophomonas maltophilia (strain R551-3) GN=mdh PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 5.055e-53 Identity = 110/204 (53.92%), Postives = 139/204 (68.14%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTA 689 K PVRV VTGAAGQIGYAL+ IA G MLG DQPVIL +L++P A AL GV MEL D AFPL+ G+V T DA A +IA++VG PR GMERKD++ +N I+ AQ +AL + A+ + KVLVV NPANTNA I + AP + +N T + RLDHNRAL Q+S KL V ++ +++WGNHS + YPD AT + A Sbjct: 2 KAPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLELPVDKAQAALKGVMMELEDCAFPLLAGMVGTDDAEVAFKDADIALLVGARPRGPGMERKDLLLENAKIFTAQGAALNKVASRDVKVLVVGNPANTNAYIAMKSAPDLKPENFTAMLRLDHNRALSQLSAKLGKPVGGMEKLVVWGNHSPTMYPDYRFATADGA 205
BLAST of CF835907 vs. ExPASy Swiss-Prot
Match: MDH_HERAR (Malate dehydrogenase OS=Herminiimonas arsenicoxydans GN=mdh PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 5.055e-53 Identity = 109/204 (53.43%), Postives = 140/204 (68.63%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 683 MAK P+RV VTGAAGQIGY+L+ IA G +LG DQPVIL +L+I A AL GV ME+ D AFPL+ GV A +D + A V+IA++VG PR GMERKD++ N I+ Q AL+ A+ N KVLVV NPANTNA I + AP++PAKN T + RLDHNRAL QI+ K V+ ++ + +WGNHS + YPD AT++ Sbjct: 1 MAKAPMRVAVTGAAGQIGYSLLFRIANGDLLGKDQPVILQLLEIDNEKAQNALKGVIMEIDDCAFPLLAGVSAHSDPMTAFKDVDIALLVGARPRGPGMERKDLLEANAQIFTVQGKALDAVASRNVKVLVVGNPANTNAYIAMKSAPNLPAKNFTAMLRLDHNRALSQIAAKTGKPVTAIEKLTVWGNHSPTMYPDYRFATID 204
BLAST of CF835907 vs. ExPASy Swiss-Prot
Match: MDH_DESPS (Malate dehydrogenase OS=Desulfotalea psychrophila GN=mdh PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 5.055e-53 Identity = 103/199 (51.76%), Postives = 137/199 (68.84%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATV 680 K PVRV +TGAAG + Y+L+ IA G MLG DQPVIL +L+IP A + L GV +EL D AFPL+ G+V + D A + A++VG PR GMER D++ N I+ Q AL A P KVLVV NPANTNALIL + AP I +NIT + RLDHNRAL Q+++K+ SDV+ +++WGNHS+SQ+PD+++A + Sbjct: 2 KPPVRVAITGAAGHVSYSLIFRIAAGHMLGKDQPVILQLLEIPQAMDVLKGVVLELEDCAFPLLHGLVCSDDVHVAFKDADYAILVGARPRGPGMERSDLIQANGPIFTTQGEALSAEANPEVKVLVVGNPANTNALILLKNAPYINPRNITAMMRLDHNRALFQVAKKMGCHCSDVEKMVVWGNHSASQFPDISYAEI 200 The following BLAST results are available for this feature:
BLAST of CF835907 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 210
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835907 ID=CF835907; Name=CF835907; organism=Citrus sinensis; type=EST; length=691bpback to top |