CF835908
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_ALCBS (Malate dehydrogenase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=mdh PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.488e-22 Identity = 49/90 (54.44%), Postives = 62/90 (68.89%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 IIK R S A AA+ A DH+R W GT EG WVS G Y DGSY + G+IYSFP T +NG+W I QGL +++FSR K+ T +EL+EE+ Sbjct: 231 IIKARGASSAASAANAAVDHMRSWALGTDEGDWVSMGIYSDGSYGIQEGLIYSFPCTCKNGDWTIVQGLEVNDFSRGKMQATEQELAEER 320
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDHC_PIG (Malate dehydrogenase, cytoplasmic OS=Sus scrofa GN=MDH1 PE=1 SV=4) HSP 1 Score: 103.605 bits (257), Expect = 7.239e-22 Identity = 52/91 (57.14%), Postives = 67/91 (73.63%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDG-SYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 +IK RKLS A+ AA CDH+RD FGTPEG +VS G DG SY VP ++YSFPVT ++ W I +GL I++FSR+K+DLT +EL+EEK Sbjct: 234 VIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDGNSYGVPDDLLYSFPVTIKDKTWKIVEGLPINDFSREKMDLTAKELAEEK 324
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_HALHL (Malate dehydrogenase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=mdh PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 9.454e-22 Identity = 49/90 (54.44%), Postives = 61/90 (67.78%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 IIK R S A AAS A DH+RDW GTPEG W S DGSY + G+IYSFPVT R G++ I GL++D+FSR ++D T EL+EE+ Sbjct: 229 IIKARGASSAASAASAAIDHMRDWALGTPEGEWTSMAVPSDGSYGIEAGLIYSFPVTCRGGDYKIVSGLSVDDFSRARMDQTAAELAEER 318
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_DEIDV (Malate dehydrogenase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=mdh PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 9.454e-22 Identity = 52/90 (57.78%), Postives = 61/90 (67.78%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 II+ R S A AAS A DH+RDW GT EG WVS G DGSY VP G+IY FPVT ++G++ I QGL I EFSR K+D T EL EE+ Sbjct: 231 IIEARGASSAASAASAAIDHMRDWALGTSEGEWVSMGIPSDGSYGVPEGLIYGFPVTVKDGKYQIVQGLEISEFSRGKMDATARELEEER 320
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_ALHEH (Malate dehydrogenase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=mdh PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.235e-21 Identity = 51/90 (56.67%), Postives = 60/90 (66.67%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 IIK R S A AAS A DHIRDWV GTPEG W S DGSY + G+IYS+P RNG++ I Q L IDEFSR+K+ T +EL EE+ Sbjct: 229 IIKARGASSAASAASSAIDHIRDWVLGTPEGEWTSMAVPSDGSYGIEKGIIYSYPCVCRNGDYEIVQDLEIDEFSREKMQATEKELVEER 318
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDHC_BOVIN (Malate dehydrogenase, cytoplasmic OS=Bos taurus GN=MDH1 PE=2 SV=3) HSP 1 Score: 102.834 bits (255), Expect = 1.235e-21 Identity = 50/91 (54.95%), Postives = 67/91 (73.63%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDG-SYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 +IK RKLS A+ AA CDH+RD FGTPEG +VS G DG SY +P ++YSFPVT ++ W + +GL I++FSR+K+DLT +EL+EEK Sbjct: 234 VIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDGNSYGIPDDLLYSFPVTIKDKTWKVVEGLPINDFSREKMDLTAKELAEEK 324
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDHC_HUMAN (Malate dehydrogenase, cytoplasmic OS=Homo sapiens GN=MDH1 PE=1 SV=4) HSP 1 Score: 102.449 bits (254), Expect = 1.613e-21 Identity = 51/91 (56.04%), Postives = 65/91 (71.43%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDG-SYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 +IK RKLS A+ AA CDH+RD FGTPEG +VS G DG SY VP ++YSFPV +N W +GL I++FSR+K+DLT +EL+EEK Sbjct: 234 VIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGVISDGNSYGVPDDLLYSFPVVIKNKTWKFVEGLPINDFSREKMDLTAKELTEEK 324
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_THEFY (Malate dehydrogenase OS=Thermobifida fusca (strain YX) GN=mdh PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.106e-21 Identity = 50/90 (55.56%), Postives = 61/90 (67.78%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 II+ R S A AA+ A DH+ DWV GTPEG W S DGSY VP G++ SFPV SRNG W I QGL I+EFSR+++D + EL EE+ Sbjct: 231 IIEARGASSAASAANAAIDHVYDWVNGTPEGDWTSVALPSDGSYGVPEGLVSSFPVVSRNGSWEIVQGLEINEFSRERIDASVRELEEER 320
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_CELJU (Malate dehydrogenase OS=Cellvibrio japonicus (strain Ueda107) GN=mdh PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.106e-21 Identity = 49/90 (54.44%), Postives = 59/90 (65.56%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 II R S A AA+ A +HIRDW GTP WVS G Y DGSY + G+IYSFP +NG+W I QGL I+EFSR K+ T +EL EE+ Sbjct: 229 IIAARGASSAASAANAAINHIRDWALGTPANDWVSMGVYSDGSYGIEKGLIYSFPCVCKNGDWEIVQGLDINEFSRAKMTATEKELQEER 318
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDHC_XENTR (Malate dehydrogenase, cytoplasmic OS=Xenopus tropicalis GN=mdh1 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.751e-21 Identity = 50/91 (54.95%), Postives = 66/91 (72.53%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDG-SYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 +IK RKLS A+ AA CDH+RD FGTP+G +VS G DG SY +P ++YSFP+T +N W I +GL I++FSR+K+DLT +EL EEK Sbjct: 234 VIKARKLSSAMSAAKAICDHVRDIWFGTPDGQFVSMGVISDGNSYGIPEDLMYSFPLTIKNKTWKIVEGLPINDFSREKMDLTAKELHEEK 324 The following BLAST results are available for this feature:
BLAST of CF835908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 149
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835908 ID=CF835908; Name=CF835908; organism=Citrus sinensis; type=EST; length=579bpback to top |