CF835908
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_CORGL (Malate dehydrogenase OS=Corynebacterium glutamicum GN=mdh PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.556e-14 Identity = 40/90 (44.44%), Postives = 51/90 (56.67%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 II+ R S A AAS A DH+RDWV GT W S G+Y +P G+ P SRNGEW I +GL I +F R ++D +EL E+ Sbjct: 234 IIEVRGKSSAASAASSAIDHMRDWVQGTEA--WSSAAIPSTGAYGIPEGIFVGLPTVSRNGEWEIVEGLEISDFQRARIDANAQELQAER 321
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_CORGB (Malate dehydrogenase OS=Corynebacterium glutamicum (strain R) GN=mdh PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.556e-14 Identity = 40/90 (44.44%), Postives = 51/90 (56.67%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 II+ R S A AAS A DH+RDWV GT W S G+Y +P G+ P SRNGEW I +GL I +F R ++D +EL E+ Sbjct: 234 IIEVRGKSSAASAASSAIDHMRDWVQGTEA--WSSAAIPSTGAYGIPEGIFVGLPTVSRNGEWEIVEGLEISDFQRARIDANAQELQAER 321
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDHB_DICDI (Probable malate dehydrogenase 2, mitochondrial OS=Dictyostelium discoideum GN=mdhB PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.238e-13 Identity = 41/90 (45.56%), Postives = 55/90 (61.11%), Query Frame = -3 Query: 311 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRN-GEWPIFQGLTIDEFSRKKLDLTPEELSEE 577 II R LS A AAS A DH+RDW +GT G W S Y +G Y G+ +SFPV N G++ I +GL +D+FS+++ D T +EL E Sbjct: 251 IIAARGLSSAASAASAAIDHMRDWTYGT-NGQWTSMAIYSEGEYGADKGLYFSFPVIVDNKGKYEIVKGLKLDQFSQERFDATRKELLSE 339
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_LEPCP (Malate dehydrogenase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=mdh PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.757e-13 Identity = 39/90 (43.33%), Postives = 53/90 (58.89%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 II R +S A AA+ A DH+RDW GT G WV+ G G Y +P ++ +PVT GE+ I +GL ID FS++ ++ T EL EK Sbjct: 233 IIAARGVSSAASAANAAIDHMRDWALGT-NGAWVTMGVPSKGEYGIPAETMFGYPVTCEGGEYKIVEGLPIDAFSQECINKTLAELEGEK 321
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_ACICJ (Malate dehydrogenase OS=Acidiphilium cryptum (strain JF-5) GN=mdh PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.703e-13 Identity = 38/90 (42.22%), Postives = 55/90 (61.11%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 +I+ R S A AA+ A D +RDWV G+ +G WVS DGSY +P G+++ PVT++ G L ID F++ +LD+T EL EE+ Sbjct: 231 VIEARGASSAASAANAAIDQVRDWVVGS-DGRWVSMAIPSDGSYGIPEGIMFGVPVTTQGGVVTRVPNLAIDAFAQSRLDITLNELKEER 319
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_CORDI (Malate dehydrogenase OS=Corynebacterium diphtheriae GN=mdh PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.048e-12 Identity = 38/90 (42.22%), Postives = 52/90 (57.78%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 II+ R S A AAS A DH+ DW+ GT +G W + DGSY VP G+I+ FP S +G+W I Q L + +F + + EL EE+ Sbjct: 230 IIEVRGKSSAASAASSAIDHMHDWINGT-DGQWRTAAIPSDGSYGVPEGLIFGFPTISEDGQWKIVQDLELSDFQKDGIARNVTELEEER 318
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH2_BURTA (Malate dehydrogenase 2 OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=mdh2 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 8.869e-12 Identity = 36/89 (40.45%), Postives = 54/89 (60.67%), Query Frame = -3 Query: 311 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEE 577 II+ R S A AA+ A D +RDW+FG+ +G WVS DGSY + G+++ PV G + + + ID F+R+++DL+ EL EE Sbjct: 231 IIEARGASSAASAANAAIDQMRDWIFGS-DGRWVSMSVPSDGSYGIAPGLMFGVPVICDGGRYERVKDIGIDAFARQRIDLSVRELQEE 318
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_DESPS (Malate dehydrogenase OS=Desulfotalea psychrophila GN=mdh PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.581e-11 Identity = 38/91 (41.76%), Postives = 51/91 (56.04%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDG-SYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 +IK R S A AAS A DH+R+WV G+ G WVS G Y G SY + +++S PV +G+W GL + F R L+ T EL E+ Sbjct: 229 VIKARGASSAASAASAAIDHMRNWVLGS-GGKWVSMGVYSRGNSYGLDEDIMFSLPVICEDGDWREVAGLELSSFQRAMLEATEAELQAER 318
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH2_RHOFD (Malate dehydrogenase 2 OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=mdh2 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.402e-11 Identity = 35/89 (39.33%), Postives = 50/89 (56.18%), Query Frame = -3 Query: 311 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEE 577 I+ R L AAS A D +RDW GT G W + G DG+Y VP G+++ FPV + ++ I GL +D F+R +D+ EL+ E Sbjct: 234 ILAARGLYAEASAASAAIDQMRDWWLGT-RGEWTTMGVVSDGAYGVPAGLVFGFPVITDCRDYRIVPGLAVDAFARGMIDVNVRELTAE 321 The following BLAST results are available for this feature:
BLAST of CF835908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 149
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835908 ID=CF835908; Name=CF835908; organism=Citrus sinensis; type=EST; length=579bpback to top |