CF835908
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDHC_XENLA (Malate dehydrogenase, cytoplasmic OS=Xenopus laevis GN=mdh1 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.751e-21 Identity = 50/91 (54.95%), Postives = 66/91 (72.53%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDG-SYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 +IK RKLS A+ AA CDH+RD FGTPEG +VS G DG SY VP ++YSFP+T +N W I +GL I++FSR+K+D+T +EL +EK Sbjct: 234 VIKARKLSSAMSAAKAICDHVRDIWFGTPEGQFVSMGVISDGNSYGVPEDLMYSFPLTIKNKTWKIVEGLCINDFSREKMDITAKELQDEK 324
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_TERTT (Malate dehydrogenase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=mdh PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.593e-21 Identity = 48/90 (53.33%), Postives = 60/90 (66.67%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 IIK R S A AA+ A H+RDW G+PEG WVS G Y DGSY + G+IYSFP +NG+W I QGL+IDEFS+ ++ T EL E+ Sbjct: 229 IIKARGASSAASAANAAIFHMRDWALGSPEGDWVSMGVYSDGSYGIEKGLIYSFPCVCKNGDWEIVQGLSIDEFSQARMTATETELQGER 318
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_AZOSB (Malate dehydrogenase OS=Azoarcus sp. (strain BH72) GN=mdh PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.593e-21 Identity = 52/90 (57.78%), Postives = 64/90 (71.11%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 II+ R LS A AA+ A DHIRDWV G+ G WV+ G DGSY +P GVIY FPVT+ NGE+ I QGL IDEFSR+++ +T EL EE+ Sbjct: 234 IIEARGLSSAASAANAAIDHIRDWVLGS-NGEWVTMGIPSDGSYGIPEGVIYGFPVTTENGEYKIVQGLEIDEFSRERMTVTLNELLEER 322
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_ACIBY (Malate dehydrogenase OS=Acinetobacter baumannii (strain AYE) GN=mdh PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.128e-21 Identity = 50/91 (54.95%), Postives = 64/91 (70.33%), Query Frame = -3 Query: 305 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEKA 577 II+ R LS A AA+ A DH+RDW GT G WV+ G DGSY +P GV++ FPVT+ NGE+ I QGL IDEFSR++++ T EL EE+A Sbjct: 232 IIEARGLSSAASAANAAIDHMRDWALGT-NGKWVTMGVPSDGSYGIPEGVMFGFPVTTENGEYKIVQGLEIDEFSRERINFTLNELEEERA 321
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_ACIBT (Malate dehydrogenase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=mdh PE=3 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 6.128e-21 Identity = 50/91 (54.95%), Postives = 64/91 (70.33%), Query Frame = -3 Query: 305 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEKA 577 II+ R LS A AA+ A DH+RDW GT G WV+ G DGSY +P GV++ FPVT+ NGE+ I QGL IDEFSR++++ T EL EE+A Sbjct: 232 IIEARGLSSAASAANAAIDHMRDWALGT-NGKWVTMGVPSDGSYGIPEGVMFGFPVTTENGEYKIVQGLEIDEFSRERINFTLNELEEERA 321
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_ACIBS (Malate dehydrogenase OS=Acinetobacter baumannii (strain SDF) GN=mdh PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.128e-21 Identity = 50/91 (54.95%), Postives = 64/91 (70.33%), Query Frame = -3 Query: 305 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEKA 577 II+ R LS A AA+ A DH+RDW GT G WV+ G DGSY +P GV++ FPVT+ NGE+ I QGL IDEFSR++++ T EL EE+A Sbjct: 232 IIEARGLSSAASAANAAIDHMRDWALGT-NGKWVTMGVPSDGSYGIPEGVMFGFPVTTENGEYKIVQGLEIDEFSRERINFTLNELEEERA 321
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_ACIBC (Malate dehydrogenase OS=Acinetobacter baumannii (strain ACICU) GN=mdh PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.128e-21 Identity = 50/91 (54.95%), Postives = 64/91 (70.33%), Query Frame = -3 Query: 305 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEKA 577 II+ R LS A AA+ A DH+RDW GT G WV+ G DGSY +P GV++ FPVT+ NGE+ I QGL IDEFSR++++ T EL EE+A Sbjct: 232 IIEARGLSSAASAANAAIDHMRDWALGT-NGKWVTMGVPSDGSYGIPEGVMFGFPVTTENGEYKIVQGLEIDEFSRERINFTLNELEEERA 321
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_ACIB5 (Malate dehydrogenase OS=Acinetobacter baumannii (strain AB0057) GN=mdh PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.128e-21 Identity = 50/91 (54.95%), Postives = 64/91 (70.33%), Query Frame = -3 Query: 305 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEKA 577 II+ R LS A AA+ A DH+RDW GT G WV+ G DGSY +P GV++ FPVT+ NGE+ I QGL IDEFSR++++ T EL EE+A Sbjct: 232 IIEARGLSSAASAANAAIDHMRDWALGT-NGKWVTMGVPSDGSYGIPEGVMFGFPVTTENGEYKIVQGLEIDEFSRERINFTLNELEEERA 321
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_ACIB3 (Malate dehydrogenase OS=Acinetobacter baumannii (strain AB307-0294) GN=mdh PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.128e-21 Identity = 50/91 (54.95%), Postives = 64/91 (70.33%), Query Frame = -3 Query: 305 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEKA 577 II+ R LS A AA+ A DH+RDW GT G WV+ G DGSY +P GV++ FPVT+ NGE+ I QGL IDEFSR++++ T EL EE+A Sbjct: 232 IIEARGLSSAASAANAAIDHMRDWALGT-NGKWVTMGVPSDGSYGIPEGVMFGFPVTTENGEYKIVQGLEIDEFSRERINFTLNELEEERA 321
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDHA_DICDI (Probable malate dehydrogenase 1 OS=Dictyostelium discoideum GN=mdhA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 8.004e-21 Identity = 48/90 (53.33%), Postives = 62/90 (68.89%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 +I RKLS A AA+ H+RDW+ GT +G VS Y DGSYNVP G+I+SFPVT NG+W I QGL I+ +++K+D T +EL EEK Sbjct: 294 VIAARKLSSAASAANAIVGHVRDWLLGTKDGEHVSMAVYSDGSYNVPKGLIFSFPVTCHNGQWTIVQGLKINSSTQQKIDATIKELQEEK 383 The following BLAST results are available for this feature:
BLAST of CF835908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 149
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835908 ID=CF835908; Name=CF835908; organism=Citrus sinensis; type=EST; length=579bpback to top |