CF835908
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_MYCPA (Malate dehydrogenase OS=Mycobacterium paratuberculosis GN=mdh PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.045e-20 Identity = 49/90 (54.44%), Postives = 60/90 (66.67%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 II R S A AAS D RDW+ GTP G WVS DGSY VP G+I SFPVT+++G+W I QGL IDEFSR ++D T EL++E+ Sbjct: 231 IIDARGASSAASAASATTDAARDWLLGTPAGDWVSMAVISDGSYGVPEGLISSFPVTTKDGDWTIVQGLEIDEFSRSRIDKTTAELADER 320
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_MYCA1 (Malate dehydrogenase OS=Mycobacterium avium (strain 104) GN=mdh PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.045e-20 Identity = 49/90 (54.44%), Postives = 60/90 (66.67%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 II R S A AAS D RDW+ GTP G WVS DGSY VP G+I SFPVT+++G+W I QGL IDEFSR ++D T EL++E+ Sbjct: 231 IIDARGASSAASAASATTDAARDWLLGTPAGDWVSMAVISDGSYGVPEGLISSFPVTTKDGDWTIVQGLEIDEFSRSRIDKTTAELADER 320
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_SACEN (Malate dehydrogenase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=mdh PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.365e-20 Identity = 50/90 (55.56%), Postives = 61/90 (67.78%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 II+ R S A AA+ A DHI WV GTPEG W S DGSY VP G+I SFPV +R+G + I QGL IDEFSR+++D + ELSEE+ Sbjct: 230 IIEARGASSAASAANAAIDHIHTWVNGTPEGDWTSAAVVSDGSYGVPEGLISSFPVVARDGRYEIVQGLEIDEFSRQRIDASVNELSEER 319
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_BDEBA (Malate dehydrogenase OS=Bdellovibrio bacteriovorus GN=mdh PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.365e-20 Identity = 51/90 (56.67%), Postives = 65/90 (72.22%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 II+ R LS A AAS A DHIRDW GT G WV+ G DGSY++P G++Y FPVT +NGE+ I +GL ID FSR+K++ T +EL+EEK Sbjct: 240 IIEARGLSSAASAASAAVDHIRDWWLGT-NGEWVTMGIPSDGSYDIPEGIMYGFPVTCKNGEYEIVKGLEIDAFSREKMNNTLKELNEEK 328
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_ARTAT (Malate dehydrogenase OS=Arthrobacter aurescens (strain TC1) GN=mdh PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.365e-20 Identity = 47/91 (51.65%), Postives = 61/91 (67.03%), Query Frame = -3 Query: 305 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEKA 577 II+ R S A AAS D RDW+ GTPEG WVS DGSY VP G++YS+PVT+ G W I +GL +++FSR+K+D T EL +E+A Sbjct: 230 IIEARGASSAASAASATIDAARDWLLGTPEGDWVSMAVASDGSYGVPEGLMYSYPVTTSGGNWEIVEGLEVNDFSRRKMDATAAELFDERA 320
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDHC_MOUSE (Malate dehydrogenase, cytoplasmic OS=Mus musculus GN=Mdh1 PE=1 SV=3) HSP 1 Score: 99.3673 bits (246), Expect = 1.365e-20 Identity = 51/91 (56.04%), Postives = 64/91 (70.33%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDG-SYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 +IK RKLS A+ AA DHIRD FGTPEG +VS G DG SY VP ++YSFPV +N W +GL I++FSR+K+DLT +EL+EEK Sbjct: 234 VIKARKLSSAMSAAKAIADHIRDIWFGTPEGEFVSMGVISDGNSYGVPDDLLYSFPVVIKNKTWKFVEGLPINDFSREKMDLTAKELTEEK 324
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDHC_RAT (Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus GN=Mdh1 PE=1 SV=3) HSP 1 Score: 98.9821 bits (245), Expect = 1.783e-20 Identity = 51/91 (56.04%), Postives = 64/91 (70.33%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDG-SYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 +IK RKLS A+ AA DHIRD FGTPEG +VS G DG SY VP ++YSFPV +N W +GL I++FSR+K+DLT +EL+EEK Sbjct: 234 VIKARKLSSAMSAAKAISDHIRDIWFGTPEGEFVSMGVISDGNSYGVPDDLLYSFPVVIKNKTWKFVEGLPINDFSREKMDLTAKELTEEK 324
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDHC_CHICK (Malate dehydrogenase, cytoplasmic OS=Gallus gallus GN=MDH1 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 3.972e-20 Identity = 49/91 (53.85%), Postives = 64/91 (70.33%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDG-SYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 +IK RKLS A+ AA CDH+RD FGTP G +VS G DG SY VP ++YSFPV ++ W +GL I++FSR+K+DLT +EL+EEK Sbjct: 234 VIKARKLSSAMSAAKAICDHVRDIWFGTPAGEFVSMGVISDGNSYGVPEDLLYSFPVVIKDKTWKFVEGLPINDFSREKMDLTAKELTEEK 324
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_THETH (Malate dehydrogenase OS=Thermus thermophilus GN=mdh PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 5.188e-20 Identity = 43/89 (48.31%), Postives = 63/89 (70.79%), Query Frame = -3 Query: 311 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEE 577 II+ R S A AA+ A +HIRDW GTPEG WVS G Y +P G++YSFPVT+++G + + +GL I+EF+RK++++T +EL +E Sbjct: 229 IIQARGASSAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEGLEINEFARKRMEITAQELLDE 317
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_THET8 (Malate dehydrogenase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=mdh PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 5.188e-20 Identity = 43/89 (48.31%), Postives = 63/89 (70.79%), Query Frame = -3 Query: 311 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEE 577 II+ R S A AA+ A +HIRDW GTPEG WVS G Y +P G++YSFPVT+++G + + +GL I+EF+RK++++T +EL +E Sbjct: 229 IIQARGASSAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEGLEINEFARKRMEITAQELLDE 317 The following BLAST results are available for this feature:
BLAST of CF835908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 149
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835908 ID=CF835908; Name=CF835908; organism=Citrus sinensis; type=EST; length=579bpback to top |