CF835908
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_POLSQ (Malate dehydrogenase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=mdh PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.718e-18 Identity = 48/91 (52.75%), Postives = 59/91 (64.84%), Query Frame = -3 Query: 305 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEKA 577 II+ R LS A AA+ A DHI DWV GT G WV+ G G Y +P VIY FPVT NGE+ + +GL IDEFSR+++ T EL EE+A Sbjct: 233 IIEARGLSSAASAANAAIDHIHDWVLGT-NGKWVTMGIPSKGEYGIPAEVIYGFPVTCENGEYKMIEGLEIDEFSRERMTHTLNELLEEQA 322
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_FRASC (Malate dehydrogenase OS=Frankia sp. (strain CcI3) GN=mdh PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.718e-18 Identity = 48/90 (53.33%), Postives = 58/90 (64.44%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 II+ R S A AAS A DHI WV GTP G W S DGSY VP G+I SFPVT+ G + I QGL +D FSR+K+D + EL+EE+ Sbjct: 231 IIEVRGASSAASAASAAIDHIFTWVNGTPAGDWTSAAIPSDGSYGVPEGLISSFPVTASGGRFEIVQGLELDAFSREKIDASVRELAEER 320
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_BURCJ (Malate dehydrogenase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=mdh PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.718e-18 Identity = 48/90 (53.33%), Postives = 59/90 (65.56%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 II+ R LS A AA+ A DH+RDWV GT G WV+ G DGSY +P +IY PVT NGE+ +GL ID FSR+K+D T EL EE+ Sbjct: 231 IIEARGLSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIPEDIIYGVPVTCENGEYKRVEGLEIDAFSREKMDGTLAELLEER 319
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_BURCH (Malate dehydrogenase OS=Burkholderia cenocepacia (strain HI2424) GN=mdh PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.718e-18 Identity = 48/90 (53.33%), Postives = 59/90 (65.56%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 II+ R LS A AA+ A DH+RDWV GT G WV+ G DGSY +P +IY PVT NGE+ +GL ID FSR+K+D T EL EE+ Sbjct: 231 IIEARGLSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIPEDIIYGVPVTCENGEYKRVEGLEIDAFSREKMDGTLAELLEER 319
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_BURCC (Malate dehydrogenase OS=Burkholderia cenocepacia (strain MC0-3) GN=mdh PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.718e-18 Identity = 48/90 (53.33%), Postives = 59/90 (65.56%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 II+ R LS A AA+ A DH+RDWV GT G WV+ G DGSY +P +IY PVT NGE+ +GL ID FSR+K+D T EL EE+ Sbjct: 231 IIEARGLSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIPEDIIYGVPVTCENGEYKRVEGLEIDAFSREKMDGTLAELLEER 319
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_BURCA (Malate dehydrogenase OS=Burkholderia cenocepacia (strain AU 1054) GN=mdh PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.718e-18 Identity = 48/90 (53.33%), Postives = 59/90 (65.56%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 II+ R LS A AA+ A DH+RDWV GT G WV+ G DGSY +P +IY PVT NGE+ +GL ID FSR+K+D T EL EE+ Sbjct: 231 IIEARGLSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIPEDIIYGVPVTCENGEYKRVEGLEIDAFSREKMDGTLAELLEER 319
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH2_BURVG (Malate dehydrogenase 2 OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=mdh2 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.718e-18 Identity = 48/90 (53.33%), Postives = 59/90 (65.56%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 II+ R LS A AA+ A DH+RDWV GT G WV+ G DGSY +P +IY PVT NGE+ +GL ID FSR+K+D T EL EE+ Sbjct: 231 IIEARGLSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIPEDIIYGVPVTCENGEYKRVEGLEIDAFSREKMDGTLAELLEER 319
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH1_BURTA (Malate dehydrogenase 1 OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=mdh1 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.718e-18 Identity = 48/90 (53.33%), Postives = 59/90 (65.56%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 II+ R LS A AA+ A DH+RDWV GT G WV+ G DGSY +P +IY PVT NGE+ +GL ID FSR+K+D T EL EE+ Sbjct: 231 IIEARGLSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIPEDIIYGVPVTCENGEYKRVEGLEIDAFSREKMDGTLAELLEER 319
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_DECAR (Malate dehydrogenase OS=Dechloromonas aromatica (strain RCB) GN=mdh PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.856e-18 Identity = 43/89 (48.31%), Postives = 62/89 (69.66%), Query Frame = -3 Query: 311 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEE 577 II+ R LS A AA+ A DH+RDWV G+ E WV+ G DGSY +P G+++ FP + G++ I QGL IDE+SR+K++ T +EL++E Sbjct: 234 IIEARGLSSAASAANAAIDHVRDWVLGSDE--WVTMGVPSDGSYGIPAGIVFGFPCECKGGKFSIIQGLEIDEYSREKINFTLKELTDE 320
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_NITEC (Malate dehydrogenase OS=Nitrosomonas eutropha (strain C91) GN=mdh PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 6.342e-18 Identity = 44/89 (49.44%), Postives = 57/89 (64.04%), Query Frame = -3 Query: 311 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEE 577 +I+ R LS A AA+ DH+R+W FGT +G W + G DGSY +P GVIY FPV +NG I QGL I+ FSR +LD EL++E Sbjct: 230 VIEARGLSSAASAANAIIDHLRNWFFGTADGDWTTMGILSDGSYEIPEGVIYGFPVICKNGMREIVQGLEINPFSRTRLDAAYNELTQE 318 The following BLAST results are available for this feature:
BLAST of CF835908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 149
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835908 ID=CF835908; Name=CF835908; organism=Citrus sinensis; type=EST; length=579bpback to top |