CF835908
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_XANOR (Malate dehydrogenase OS=Xanthomonas oryzae pv. oryzae GN=mdh PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 8.282e-18 Identity = 45/91 (49.45%), Postives = 62/91 (68.13%), Query Frame = -3 Query: 305 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEKA 577 II+ R LS A AA+ A DH+RDWV G+ G WV+ G DGSY + GVI+ FPVT+ NG++ + + L ID+FS+K +D T EL EE++ Sbjct: 232 IIEARGLSSAASAANAAIDHVRDWVLGS-NGKWVTMGVPSDGSYGISEGVIFGFPVTTENGQYSLVKDLPIDDFSQKYIDKTLAELEEERS 321
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_XANOP (Malate dehydrogenase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=mdh PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 8.282e-18 Identity = 45/91 (49.45%), Postives = 62/91 (68.13%), Query Frame = -3 Query: 305 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEKA 577 II+ R LS A AA+ A DH+RDWV G+ G WV+ G DGSY + GVI+ FPVT+ NG++ + + L ID+FS+K +D T EL EE++ Sbjct: 232 IIEARGLSSAASAANAAIDHVRDWVLGS-NGKWVTMGVPSDGSYGISEGVIFGFPVTTENGQYSLVKDLPIDDFSQKYIDKTLAELEEERS 321
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_XANOM (Malate dehydrogenase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=mdh PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 8.282e-18 Identity = 45/91 (49.45%), Postives = 62/91 (68.13%), Query Frame = -3 Query: 305 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEKA 577 II+ R LS A AA+ A DH+RDWV G+ G WV+ G DGSY + GVI+ FPVT+ NG++ + + L ID+FS+K +D T EL EE++ Sbjct: 232 IIEARGLSSAASAANAAIDHVRDWVLGS-NGKWVTMGVPSDGSYGISEGVIFGFPVTTENGQYSLVKDLPIDDFSQKYIDKTLAELEEERS 321
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_NITMU (Malate dehydrogenase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=mdh PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 8.282e-18 Identity = 46/90 (51.11%), Postives = 57/90 (63.33%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 +I+ R S A AA+ A H+RDWV GTPEG WVS G DGSY +P GVIY +PVT + GE+ I L I EFSR K+ + EL E+ Sbjct: 230 VIEARGSSSAASAANAAICHMRDWVSGTPEGDWVSMGIPSDGSYGIPEGVIYGYPVTCQGGEYKIVPDLEISEFSRMKMQASYRELMGER 319
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_POLNS (Malate dehydrogenase OS=Polynucleobacter necessarius (strain STIR1) GN=mdh PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.082e-17 Identity = 47/91 (51.65%), Postives = 59/91 (64.84%), Query Frame = -3 Query: 305 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEKA 577 II+ R LS A AA+ A DHI DWV GT G WV+ G G Y++P VIY FPV NGE+ + +GL IDEFSR+++ T EL EE+A Sbjct: 233 IIEARGLSSAASAANAAIDHIHDWVLGT-NGKWVTMGIPSKGEYDIPAEVIYGFPVVCENGEYKMIEGLEIDEFSRERMTHTLNELLEEQA 322
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_BURS3 (Malate dehydrogenase OS=Burkholderia sp. (strain 383) GN=mdh PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.082e-17 Identity = 47/90 (52.22%), Postives = 58/90 (64.44%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 II+ R LS A AA+ A DH+RDWV GT G WV+ G DGSY +P +IY PV NGE+ +GL ID FSR+K+D T EL EE+ Sbjct: 231 IIEARGLSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIPEDIIYGVPVVCENGEYKRIEGLEIDAFSREKMDGTLAELLEER 319
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_XYLFT (Malate dehydrogenase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=mdh PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.413e-17 Identity = 45/91 (49.45%), Postives = 61/91 (67.03%), Query Frame = -3 Query: 305 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEKA 577 II+ R LS A AA+ A DH+RDW+ G+ G W++ G DGSY +P G+I+ FPVT+ NGE+ I + L ID FS+ +D T EL EE+A Sbjct: 232 IIEARGLSSAASAANAAIDHMRDWLLGS-NGKWITMGVPSDGSYGIPEGMIFGFPVTTTNGEYSIVKDLPIDTFSKTYIDKTLAELEEERA 321
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_XYLFM (Malate dehydrogenase OS=Xylella fastidiosa (strain M12) GN=mdh PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.413e-17 Identity = 45/91 (49.45%), Postives = 61/91 (67.03%), Query Frame = -3 Query: 305 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEKA 577 II+ R LS A AA+ A DH+RDW+ G+ G W++ G DGSY +P G+I+ FPVT+ NGE+ I + L ID FS+ +D T EL EE+A Sbjct: 232 IIEARGLSSAASAANAAIDHMRDWLLGS-NGKWITMGVPSDGSYGIPEGMIFGFPVTTTNGEYSIVKDLPIDTFSKTYIDKTLAELEEERA 321
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_XYLF2 (Malate dehydrogenase OS=Xylella fastidiosa (strain M23) GN=mdh PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.413e-17 Identity = 45/91 (49.45%), Postives = 61/91 (67.03%), Query Frame = -3 Query: 305 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEKA 577 II+ R LS A AA+ A DH+RDW+ G+ G W++ G DGSY +P G+I+ FPVT+ NGE+ I + L ID FS+ +D T EL EE+A Sbjct: 232 IIEARGLSSAASAANAAIDHMRDWLLGS-NGKWITMGVPSDGSYGIPEGMIFGFPVTTTNGEYSIVKDLPIDTFSKTYIDKTLAELEEERA 321
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_BURCM (Malate dehydrogenase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=mdh PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.413e-17 Identity = 47/90 (52.22%), Postives = 58/90 (64.44%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 II+ R LS A AA+ A DH+RDWV GT G WV+ G DGSY +P +IY PV NGE+ +GL ID FSR+K+D T EL EE+ Sbjct: 231 IIEARGLSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIPEDIIYGVPVVCENGEYKRVEGLEIDAFSREKMDGTLAELLEER 319 The following BLAST results are available for this feature:
BLAST of CF835908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 149
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835908 ID=CF835908; Name=CF835908; organism=Citrus sinensis; type=EST; length=579bpback to top |