CF835909
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_ACIB3 (Malate dehydrogenase OS=Acinetobacter baumannii (strain AB307-0294) GN=mdh PE=3 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.692e-52 Identity = 106/202 (52.48%), Postives = 137/202 (67.82%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 683 K+PVRV VTGAAGQIGY+L+ IA G MLG DQPVIL +L++P A +AL GV MEL D AFPL+ G++ T D A + A++VG PR GMER D++ N I+ Q AL + A+ + KVLVV NPANTNA I + AP +PAKN T + RLDHNRAL Q+++K V V+D++ + +WGNHS + Y D AT N Sbjct: 2 KQPVRVAVTGAAGQIGYSLLFRIASGEMLGKDQPVILQLLEVPVEKAQQALKGVMMELDDCAFPLLAGMIGTDDPKVAFKDADYALLVGSRPRGPGMERADLLKVNGEIFIGQGQALNEVASRDVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLRLDHNRALTQVAQKAGVAVADIEKLTVWGNHSPTMYADYRFATAN 203
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_BURXL (Malate dehydrogenase OS=Burkholderia xenovorans (strain LB400) GN=mdh PE=3 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 3.516e-52 Identity = 105/200 (52.50%), Postives = 134/200 (67.00%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHAT 677 MAK RV VTGAAGQI Y+L+ IA G +LG DQPVIL +LD+P A A+ GV MEL D AFPL+ GVV T D A ++A++VG PR +GMERKD++S N I+ Q AL + A+ + KVLVV NPANTNA I + AP +P KN T + RLDHNRAL Q++ K V+ ++ + +WGNHS + YPD AT Sbjct: 1 MAKPAKRVAVTGAAGQIAYSLLFRIANGDLLGKDQPVILQLLDLPQAQGAVKGVVMELDDCAFPLLSGVVITDDPKVAFKDADVALLVGARPRSKGMERKDLLSANAEIFTVQGKALNEVASRDVKVLVVGNPANTNAYIAMKSAPDLPKKNFTAMLRLDHNRALSQLAAKSGKPVASIEKLAVWGNHSPTMYPDFRVAT 200
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_ACIBS (Malate dehydrogenase OS=Acinetobacter baumannii (strain SDF) GN=mdh PE=3 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 3.516e-52 Identity = 106/202 (52.48%), Postives = 137/202 (67.82%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 683 K+PVRV VTGAAGQIGY+L+ IA G MLG DQPVIL +L++P A +AL GV MEL D AFPL+ G++ T D A + A++VG PR GMER D++ N I+ Q AL + A+ + KVLVV NPANTNA I + AP +PAKN T + RLDHNRAL Q+++K V V+D++ + +WGNHS + Y D AT N Sbjct: 2 KQPVRVAVTGAAGQIGYSLLFRIASGEMLGKDQPVILQLLEVPVEKAQQALKGVMMELDDCAFPLLAGMIGTDDPKVAFKDADYALLVGSRPRGPGMERADLLKVNGEIFIGQGQALNEVASRDVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLRLDHNRALTQVAQKAGVVVADIEKLTVWGNHSPTMYADYRFATAN 203
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDHB_DICDI (Probable malate dehydrogenase 2, mitochondrial OS=Dictyostelium discoideum GN=mdhB PE=3 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 3.516e-52 Identity = 103/200 (51.50%), Postives = 135/200 (67.50%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHA-APNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATV 680 K PVRV +TGA+GQIGY L+ IA G MLG DQP+IL L++P A +L GV MEL D AFPL+KG+V + EA G + A++VG PR +GMER D++ N I+ Q AL++ A +VLVV NPANTNALI AP+I K + +TRLDHNR L Q+++K V+D++ IWGNHS++QYPD+N TV Sbjct: 22 KAPVRVAITGASGQIGYQLLFRIASGDMLGKDQPIILQCLELPGAMNSLKGVSMELDDCAFPLLKGIVQSDKPEEAFAGADYALLVGARPRSKGMERGDLLKANAEIFSVQGKALDKSANRDTLRVLVVGNPANTNALIAARNAPNIDPKRFSAMTRLDHNRGLAQLADKTGSAVTDIEKFCIWGNHSATQYPDINFGTV 221
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_XANOR (Malate dehydrogenase OS=Xanthomonas oryzae pv. oryzae GN=mdh PE=3 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 5.998e-52 Identity = 108/205 (52.68%), Postives = 139/205 (67.80%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAA 692 K PVRV VTGAAGQIGYAL+ IA G MLG DQPVIL +L++ A AL GV MEL D AFPL+ G+V T DA A +++A++VG PR GMERKD++ +N I+ AQ +AL + A + KVLVV NPANTNA I + AP + KN T + RLDHNRAL Q++ KL V ++ +++WGNHS + YPD AT + A+ Sbjct: 2 KAPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLELSNEKAQAALKGVMMELEDCAFPLLAGMVGTDDAEVAFKDIDVALLVGARPRGPGMERKDLLLENAKIFTAQGAALNKVAKRDVKVLVVGNPANTNAYIAMKSAPDLNPKNFTAMLRLDHNRALSQLALKLGKPVGGIEKLVVWGNHSPTMYPDYRFATSDGAS 206
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_XANOM (Malate dehydrogenase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=mdh PE=3 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 5.998e-52 Identity = 108/205 (52.68%), Postives = 139/205 (67.80%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAA 692 K PVRV VTGAAGQIGYAL+ IA G MLG DQPVIL +L++ A AL GV MEL D AFPL+ G+V T DA A +++A++VG PR GMERKD++ +N I+ AQ +AL + A + KVLVV NPANTNA I + AP + KN T + RLDHNRAL Q++ KL V ++ +++WGNHS + YPD AT + A+ Sbjct: 2 KAPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLELSNEKAQAALKGVMMELEDCAFPLLAGMVGTDDAEVAFKDIDVALLVGARPRGPGMERKDLLLENAKIFTAQGAALNKVAKRDVKVLVVGNPANTNAYIAMKSAPDLNPKNFTAMLRLDHNRALSQLALKLGKPVGGIEKLVVWGNHSPTMYPDYRFATSDGAS 206
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_BDEBA (Malate dehydrogenase OS=Bdellovibrio bacteriovorus GN=mdh PE=3 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 5.998e-52 Identity = 110/207 (53.14%), Postives = 137/207 (66.18%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS---IPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTA 689 K PVRV VTGAAGQIGYAL+ IA G MLG DQPVIL +L+IP A +AL GV MEL D AFPL+ ++AT D A ++A++VG PR GMERKD+++ N I+ Q A+ ++A PN KVLVV NPANTNA I + A + AKN T + RLDHNRAL Q++ K V+ K V +WGNHS + YPDV AT + A Sbjct: 2 KAPVRVAVTGAAGQIGYALLFRIASGAMLGADQPVILQLLEIPDEKAQKALKGVMMELEDCAFPLLHSMIATGDPAVAFKDADVALLVGARPRGPGMERKDLLTANGQIFTVQGEAIGKYANPNVKVLVVGNPANTNAYIAMKSAMKHGRVKAKNFTAMLRLDHNRALSQLATKTGKPVASFKKVAVWGNHSPTMYPDVRFATADGA 208
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_VARPS (Malate dehydrogenase OS=Variovorax paradoxus (strain S110) GN=mdh PE=3 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 7.833e-52 Identity = 108/214 (50.47%), Postives = 142/214 (66.36%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRE 713 M+K+PVRV VTGAAGQIGYAL+ IA G MLG DQPVIL +L+IP A +AL GV MEL D AFPL+ G+ A D + A + A++VG PR GMER ++++ N +I+ AQ AL A+ N KVLVV NPANTNA I + AP +P KN T + RLDHNRA QI+ K V+D++ +++WGNHS + Y D AT+ + K + + Sbjct: 1 MSKKPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEIPDEKAQKALKGVMMELDDCAFPLLAGMEAHGDPMTAFKDADYALLVGSRPRGPGMERAELLAVNGAIFTAQGKALNAVASRNVKVLVVGNPANTNAYIAMKSAPDLPRKNFTAMLRLDHNRAASQIAAKTGKAVADIEKLVVWGNHSPTMYADYRFATIKGESVAKMIND 214
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_POLSJ (Malate dehydrogenase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=mdh PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.023e-51 Identity = 107/214 (50.00%), Postives = 142/214 (66.36%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAA--EALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRE 713 M+K+PVRV VTGAAGQIGYAL+ IA G MLG DQPVIL +L++P +AL GV MEL D AFPL+ G+ A +D + A + A++VG PR GMER ++++ N +I+ AQ AL A+ N KVLVV NPANTNA I + AP +P KN T + RLDHNRA QI+ K V+D++ + +WGNHS + Y D AT+N + K + + Sbjct: 1 MSKKPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEVPVEGPQKALKGVMMELDDCAFPLLAGMEAHSDPMTAFKDADYALLVGSRPRGPGMERAELLAVNGAIFTAQGKALNAVASRNVKVLVVGNPANTNAYIAMKSAPDLPRKNFTAMLRLDHNRAASQIAAKTGKAVADIEKLTVWGNHSPTMYADYRFATINGESVAKMIND 214
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_MYCA1 (Malate dehydrogenase OS=Mycobacterium avium (strain 104) GN=mdh PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.023e-51 Identity = 101/201 (50.25%), Postives = 138/201 (68.66%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATV 680 M+ P++V VTGAAGQIGY+L+ +A G +LG D+P+ L +L+I PA +AL GV MEL D AFPL+ GV D + G N+A++VG PR GMER D++ N +I+ AQ AL + AA + +V V NPANTNALI AP IP + + LTRLDHNRA+ Q+++K +V+D+ + IWGNHS++QYPD+ HA V Sbjct: 1 MSASPLKVAVTGAAGQIGYSLLFRLASGSLLGPDRPIELRLLEIEPALKALEGVVMELDDCAFPLLSGVEIGADPNKIFDGANLALLVGARPRGPGMERSDLLEANGAIFTAQGKALNEVAADDIRVGVTGNPANTNALIAMSNAPDIPRERFSALTRLDHNRAISQLAKKTGAKVTDITKMTIWGNHSATQYPDIFHAEV 201 The following BLAST results are available for this feature:
BLAST of CF835909 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 212
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835909 ID=CF835909; Name=CF835909; organism=Citrus sinensis; type=EST; length=719bpback to top |