CF835909
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_MYCTU (Malate dehydrogenase OS=Mycobacterium tuberculosis GN=mdh PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.745e-51 Identity = 102/201 (50.75%), Postives = 138/201 (68.66%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATV 680 M+ P++V VTGAAGQIGY+L+ +A G +LG D+P+ L +L+I PA +AL GV MEL D AFPL+ GV +D + GV++A++VG PR GMER D++ N +I+ AQ AL AA + +V V NPANTNALI AP IP + + LTRLDHNRA+ Q++ K V+D+K + IWGNHS++QYPD+ HA V Sbjct: 1 MSASPLKVAVTGAAGQIGYSLLFRLASGSLLGPDRPIELRLLEIEPALQALEGVVMELDDCAFPLLSGVEIGSDPQKIFDGVSLALLVGARPRGAGMERSDLLEANGAIFTAQGKALNAVAADDVRVGVTGNPANTNALIAMTNAPDIPRERFSALTRLDHNRAISQLAAKTGAAVTDIKKMTIWGNHSATQYPDLFHAEV 201
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_MYCTA (Malate dehydrogenase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=mdh PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.745e-51 Identity = 102/201 (50.75%), Postives = 138/201 (68.66%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATV 680 M+ P++V VTGAAGQIGY+L+ +A G +LG D+P+ L +L+I PA +AL GV MEL D AFPL+ GV +D + GV++A++VG PR GMER D++ N +I+ AQ AL AA + +V V NPANTNALI AP IP + + LTRLDHNRA+ Q++ K V+D+K + IWGNHS++QYPD+ HA V Sbjct: 1 MSASPLKVAVTGAAGQIGYSLLFRLASGSLLGPDRPIELRLLEIEPALQALEGVVMELDDCAFPLLSGVEIGSDPQKIFDGVSLALLVGARPRGAGMERSDLLEANGAIFTAQGKALNAVAADDVRVGVTGNPANTNALIAMTNAPDIPRERFSALTRLDHNRAISQLAAKTGAAVTDIKKMTIWGNHSATQYPDLFHAEV 201
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_MYCBT (Malate dehydrogenase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=mdh PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.745e-51 Identity = 102/201 (50.75%), Postives = 138/201 (68.66%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATV 680 M+ P++V VTGAAGQIGY+L+ +A G +LG D+P+ L +L+I PA +AL GV MEL D AFPL+ GV +D + GV++A++VG PR GMER D++ N +I+ AQ AL AA + +V V NPANTNALI AP IP + + LTRLDHNRA+ Q++ K V+D+K + IWGNHS++QYPD+ HA V Sbjct: 1 MSASPLKVAVTGAAGQIGYSLLFRLASGSLLGPDRPIELRLLEIEPALQALEGVVMELDDCAFPLLSGVEIGSDPQKIFDGVSLALLVGARPRGAGMERSDLLEANGAIFTAQGKALNAVAADDVRVGVTGNPANTNALIAMTNAPDIPRERFSALTRLDHNRAISQLAAKTGAAVTDIKKMTIWGNHSATQYPDLFHAEV 201
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_MYCBP (Malate dehydrogenase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=mdh PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.745e-51 Identity = 102/201 (50.75%), Postives = 138/201 (68.66%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATV 680 M+ P++V VTGAAGQIGY+L+ +A G +LG D+P+ L +L+I PA +AL GV MEL D AFPL+ GV +D + GV++A++VG PR GMER D++ N +I+ AQ AL AA + +V V NPANTNALI AP IP + + LTRLDHNRA+ Q++ K V+D+K + IWGNHS++QYPD+ HA V Sbjct: 1 MSASPLKVAVTGAAGQIGYSLLFRLASGSLLGPDRPIELRLLEIEPALQALEGVVMELDDCAFPLLSGVEIGSDPQKIFDGVSLALLVGARPRGAGMERSDLLEANGAIFTAQGKALNAVAADDVRVGVTGNPANTNALIAMTNAPDIPRERFSALTRLDHNRAISQLAAKTGAAVTDIKKMTIWGNHSATQYPDLFHAEV 201
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_MYCBO (Malate dehydrogenase OS=Mycobacterium bovis GN=mdh PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.745e-51 Identity = 102/201 (50.75%), Postives = 138/201 (68.66%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATV 680 M+ P++V VTGAAGQIGY+L+ +A G +LG D+P+ L +L+I PA +AL GV MEL D AFPL+ GV +D + GV++A++VG PR GMER D++ N +I+ AQ AL AA + +V V NPANTNALI AP IP + + LTRLDHNRA+ Q++ K V+D+K + IWGNHS++QYPD+ HA V Sbjct: 1 MSASPLKVAVTGAAGQIGYSLLFRLASGSLLGPDRPIELRLLEIEPALQALEGVVMELDDCAFPLLSGVEIGSDPQKIFDGVSLALLVGARPRGAGMERSDLLEANGAIFTAQGKALNAVAADDVRVGVTGNPANTNALIAMTNAPDIPRERFSALTRLDHNRAISQLAAKTGAAVTDIKKMTIWGNHSATQYPDLFHAEV 201
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_ACICJ (Malate dehydrogenase OS=Acidiphilium cryptum (strain JF-5) GN=mdh PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.745e-51 Identity = 104/199 (52.26%), Postives = 129/199 (64.82%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHA 674 MAK PVR+ VTGAAGQI YALV IA G +LG DQPVILH+LD+P AL GV MEL D AFPL+ G+VAT D A ++I +VG PR +GMERKD++ N I+ Q AL + A + +VLVV NPANTNA I + AP + + + RLDHNRA ++ K V V DV +I+WGNHS + YPD A Sbjct: 1 MAKSPVRIAVTGAAGQIAYALVFRIASGALLGPDQPVILHLLDLPQMQGALGGVMMELEDCAFPLLAGMVATDDPKVAFKDIDIGFLVGARPRGKGMERKDLLGANAEIFTVQGRALNEVAKRSARVLVVGNPANTNAYIAMKSAPDLSPDCFSAMIRLDHNRAASMLAAKAGVNVGDVGKLIVWGNHSPTMYPDYRFA 199
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_XANOP (Malate dehydrogenase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=mdh PE=3 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.279e-51 Identity = 107/205 (52.20%), Postives = 138/205 (67.32%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAA 692 K PVRV VTGAAGQIGYAL+ IA G MLG DQPVIL +L++ A AL GV MEL D AFPL+ G+V T DA A +++A++VG PR GMERKD++ +N I+ AQ +AL + A + KVLVV NPANTNA I + AP + N T + RLDHNRAL Q++ KL V ++ +++WGNHS + YPD AT + A+ Sbjct: 2 KAPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLELSNEKAQAALKGVMMELEDCAFPLLAGMVGTDDAEVAFKDIDVALLVGARPRGPGMERKDLLLENAKIFTAQGAALNKVAKRDVKVLVVGNPANTNAYIAMKSAPDLNPNNFTAMLRLDHNRALSQLALKLGKPVGGIEKLVVWGNHSPTMYPDYRFATSDGAS 206
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_ARTAT (Malate dehydrogenase OS=Arthrobacter aurescens (strain TC1) GN=mdh PE=3 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.279e-51 Identity = 100/197 (50.76%), Postives = 135/197 (68.53%), Query Frame = 3 Query: 90 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATV 680 P+++ VTGAAGQIGY+L+ IA G + G D PV L +L+I PA +AL GV MEL D AFP + V DA GV +A++VG PR +GMER D++S N +I+ AQ AL + AA + ++ V NPANTNALI AP IPA + LTRLDHNRA+GQ++ K + +V D++ + +WGNHS++QYPD+ HA V Sbjct: 4 PIKIAVTGAAGQIGYSLLFRIASGALFGGDTPVQLRLLEITPALKALEGVVMELDDCAFPALDSVEIGDDADHIFDGVTLALLVGARPRSKGMERGDLLSANGAIFTAQGKALNRVAADDVRIGVTGNPANTNALIAMSNAPDIPASRFSALTRLDHNRAIGQLAAKTHARVGDIRKMTVWGNHSATQYPDIFHAEV 200
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH2_BURTA (Malate dehydrogenase 2 OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=mdh2 PE=3 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 2.977e-51 Identity = 99/214 (46.26%), Postives = 145/214 (67.76%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELV 719 M E R+ V+GAAGQI Y+L+ IA+G +LG DQPVIL +LD+P A A+ GV MEL D AFPL+K + TD A + A +VG PR +GMER+D++++N +I++ Q AL + A+ + KVLVV NPANTNA IL+ FAP +P I+ + RLDHNRA+ ++++ NV V + ++++WGNHS + +PD HA + G + V++L+ Sbjct: 1 MNTEAKRIAVSGAAGQIAYSLLFRIAQGDLLGEDQPVILQLLDLPQAYGAVQGVVMELQDCAFPLLKEIQVATDPHAAFLNADYAFLVGSKPRTKGMERRDLLAENAAIFRTQGRALNEAASRDVKVLVVGNPANTNASILRRFAPDLPDDAISAMIRLDHNRAVSMLAQRCNVDVDSIADMVVWGNHSPTMFPDYRHARI----GRRLVKDLI 210
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_NOCFA (Malate dehydrogenase OS=Nocardia farcinica GN=mdh PE=3 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 8.660e-51 Identity = 103/210 (49.05%), Postives = 136/210 (64.76%), Query Frame = 3 Query: 90 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELV 719 PV V VTGAAGQI Y L+ IA G MLG P+ L +L+IP A +L GV MEL D AFPL+ + + D G N+A++VG PR GMER D+++ N I+ Q A+ AA + KVLVV NPANTNA I AP +PA+ T +TRLDHNRA+ Q+++K +++ + +WGNHS++QYPD+ HATV AG +P RELV Sbjct: 9 PVTVTVTGAAGQIAYGLLFRIASGAMLGPHTPIRLRLLEIPAAVASLEGVAMELEDGAFPLLDAIDISDDPWTGFAGANVALLVGARPRTAGMERADLLAANGPIFTDQGQAINAVAADDVKVLVVGNPANTNAFIAMSNAPDVPAERFTAMTRLDHNRAIAQLAKKTGAPATEIHRIAVWGNHSATQYPDLTHATV---AG-RPARELV 214 The following BLAST results are available for this feature:
BLAST of CF835909 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 212
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835909 ID=CF835909; Name=CF835909; organism=Citrus sinensis; type=EST; length=719bpback to top |