CF835909
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_VEREI (Malate dehydrogenase OS=Verminephrobacter eiseniae (strain EF01-2) GN=mdh PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.131e-50 Identity = 105/202 (51.98%), Postives = 136/202 (67.33%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAA--EALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHAT 677 M K+PVRV VTGAAGQIGYAL+ IA G MLG DQPVIL +L++P +ALNGV MEL D AFPL+ G+ A +D + A + A++VG PR GMER ++++ N +I+ AQ AL A+ KVLVV NPANTNA I + AP +P KN T + RLDHNRA+ QI+ K V+D++ + +WGNHS + Y D AT Sbjct: 1 MNKKPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEVPAEGPQKALNGVMMELDDCAFPLLAGMTAHSDPMAAFKDADYALLVGSRPRGPGMERAELLAVNGAIFIAQGKALNAVASRQVKVLVVGNPANTNAFIAMQSAPDLPRKNFTAMLRLDHNRAVSQIAAKTGQAVADIEKLTVWGNHSPTMYADYRFAT 202
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_RHOOB (Malate dehydrogenase OS=Rhodococcus opacus (strain B4) GN=mdh PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.131e-50 Identity = 100/202 (49.50%), Postives = 128/202 (63.37%), Query Frame = 3 Query: 90 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAG 695 P V VTGAAG IGYA + IA G MLG D P+ L +L+IPPA A G MEL D+AFPL+ V D G ++A+++G PR +GMER D+++ N I+ Q A+ Q AA +VLVV NPANTNAL+ AP +PA+ T LTRLDHNRA+ Q++ V D+ V IWGNHSS+QYPD+ HA V +G Sbjct: 7 PAVVTVTGAAGSIGYAALFRIAAGAMLGPDTPIRLRLLEIPPAVSAAEGTAMELDDSAFPLLLDVEVHDDPKRGFDGTDVALLIGSRPRSKGMERGDLLAANGQIFTVQGRAINQVAADGVRVLVVGNPANTNALVAANNAPDVPAERFTALTRLDHNRAIAQLARHSGAAVRDISRVTIWGNHSSTQYPDIFHARVGDRSG 208
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_NOCSJ (Malate dehydrogenase OS=Nocardioides sp. (strain BAA-499 / JS614) GN=mdh PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.477e-50 Identity = 103/201 (51.24%), Postives = 138/201 (68.66%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATV 680 M+ P++V VTGAAGQIGY+L+ +A G +LG D+P+ L +L+I PA +AL GV MEL D AFP + GV DA + GVN+A++VG PR GMER D++S N +I+ AQ AL + AA + ++ V NPANTNALI AP IP + LTRLDHNRA+ Q++ K V+D+K + IWGNHS++QYPDV HA + Sbjct: 1 MSSTPLKVAVTGAAGQIGYSLLFRLASGSLLG-DRPIELRLLEITPALKALEGVVMELDDCAFPNLAGVQIGDDAEQIFDGVNLALLVGARPRGPGMERGDLLSANGAIFTAQGKALNKVAADDVRIGVTGNPANTNALIAMTNAPDIPQARFSALTRLDHNRAISQLAAKTGAAVTDIKKMTIWGNHSATQYPDVFHAEI 200
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_RHOSR (Malate dehydrogenase OS=Rhodococcus sp. (strain RHA1) GN=mdh PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 1.929e-50 Identity = 100/202 (49.50%), Postives = 129/202 (63.86%), Query Frame = 3 Query: 90 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAG 695 P V VTGAAG IGYA + IA G MLG D P+ L +L+IP A A G MEL D+AFPL++ + D G ++A+++G PR +GMER D+++ N I+ Q AL Q AA +VLVV NPANTNAL+ AP IPA+ T LTRLDHNRA+ Q++ V D++ V IWGNHSS+QYPD+ HA V +G Sbjct: 7 PAVVTVTGAAGSIGYASLFRIAAGEMLGPDTPIRLRLLEIPSAVSAAEGTAMELDDSAFPLLRDIEVHDDPKRGFDGTDVALLIGSRPRSKGMERGDLLAANGQIFTVQGRALNQVAADGVRVLVVGNPANTNALVAANNAPDIPAERFTALTRLDHNRAIAQLARHSGAAVKDIRRVAIWGNHSSTQYPDIFHARVGDRSG 208
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_MYCLE (Malate dehydrogenase OS=Mycobacterium leprae GN=mdh PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 4.298e-50 Identity = 105/214 (49.07%), Postives = 141/214 (65.89%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELV 719 M+ P++V VTGAAGQIGY+L+ +A G +LG D+P+ L +L+I PA +AL GV MEL D AF L+ GV D + GVN+A++VG PR GMER D++ N +I+ AQ AL AA + +V V NPANTNALI AP IP + + LTRLDHNRA+ Q++ K V+D++ + IWGNHS++QYPDV HA + G K E+V Sbjct: 1 MSPRPLKVAVTGAAGQIGYSLLFRLASGSLLGLDRPIELRLLEIEPALKALEGVVMELDDCAFLLLAGVEIGADPNKVFDGVNLALLVGARPRGPGMERGDLLEANGAIFTAQGKALNAVAAADIRVGVTGNPANTNALIAMTNAPDIPRERFSALTRLDHNRAIAQLATKTGSAVTDIRKMTIWGNHSATQYPDVFHAEI----GGKNAAEVV 210
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_MYCVP (Malate dehydrogenase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=mdh PE=3 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 7.332e-50 Identity = 99/202 (49.01%), Postives = 126/202 (62.38%), Query Frame = 3 Query: 90 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAG 695 PV V VTGAAG IGYA + IA G MLG PV L +L++P A A GV MEL D AFPL+ G D A GV++A+++G PR +GMER D++ N I+ AL A+P+ +VLVV NPANTNAL+ AP IPA T LTRLDHNRA+ + V V+++ + IWGNHS +QYPD+ HA V +G Sbjct: 8 PVTVAVTGAAGHIGYAALFRIAAGAMLGHTTPVTLRLLELPDAVRAAEGVVMELEDGAFPLLAGTEIYDDPTRAFDGVDVALLIGARPRTKGMERADLLGANAEIFATSGKALNAGASPDVRVLVVGNPANTNALVASAHAPDIPADRFTALTRLDHNRAVAATARHSGVPVTEISRMTIWGNHSPTQYPDIFHAVVGGRSG 209
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_XYLFA (Malate dehydrogenase OS=Xylella fastidiosa GN=mdh PE=3 SV=2) HSP 1 Score: 196.823 bits (499), Expect = 9.575e-50 Identity = 104/202 (51.49%), Postives = 137/202 (67.82%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 683 K VRV VTGAAGQIGY+L+ IA G M G D+PVIL ML++P A AL GV MEL D AFPL+ G+V T + A ++A++VG PR GMERKD++ +N I+ AQ +AL + A + KVLVV NPANTNA I + AP + K+ T + RLDHNRAL Q+S KL+ V++++ +I+WGNHS + YPD AT + Sbjct: 2 KSLVRVAVTGAAGQIGYSLLFRIAAGEMFGKDRPVILQMLELPDEKAQAALKGVMMELEDCAFPLLAGMVGTDNPDIAFKDADVALLVGSRPRGPGMERKDLLMENAKIFTAQGAALNKVARRDVKVLVVGNPANTNAYIAMKSAPDLNPKHFTAMLRLDHNRALSQLSTKLSKPVANIEKLIVWGNHSPTMYPDYRFATAD 203
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_CORGL (Malate dehydrogenase OS=Corynebacterium glutamicum GN=mdh PE=1 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 9.575e-50 Identity = 101/208 (48.56%), Postives = 138/208 (66.35%), Query Frame = 3 Query: 96 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELV 719 +V VTGAAGQI Y+L+ IA G + GTD PV L +L+IP A GV MEL+D+AFPL++ + T DA EA G N A +VG PR +G ER D+++ N I+ Q A+ +AA + +VLVV NPANTNALI AP +PA + RLDHNRA+ Q++ KL ++ N+++WGNHS++Q+PD+ +ATV GEK V +LV Sbjct: 11 KVTVTGAAGQISYSLLWRIANGEVFGTDTPVELKLLEIPQALGGAEGVAMELLDSAFPLLRNITITADANEAFDGANAAFLVGAKPRGKGEERADLLANNGKIFGPQGKAINDNAADDIRVLVVGNPANTNALIASAAAPDVPASRFNAMMRLDHNRAISQLATKLGRGSAEFNNIVVWGNHSATQFPDITYATV---GGEK-VTDLV 214
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_POLNA (Malate dehydrogenase OS=Polaromonas naphthalenivorans (strain CJ2) GN=mdh PE=3 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.251e-49 Identity = 103/203 (50.74%), Postives = 137/203 (67.49%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAA--EALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATV 680 M+K+PVRV VTGAAGQIGYAL+ IA G MLG DQPVIL +L++P +AL GV MEL D AFPL+ + A +D + A + A++VG PR GMER ++++ N +I+ AQ AL A+ + +VLVV NPANTNA I + AP +PAKN T + RLDHNRA QI+ K V+D++ + +WGNHS + Y D AT+ Sbjct: 1 MSKKPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEVPVEGPQKALKGVMMELDDCAFPLLVEMTAHSDPMTAFKDADYALLVGSRPRGPGMERAELLAVNGAIFTAQGKALNAVASRDVRVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLRLDHNRAASQIAAKTGKAVADIEKLTVWGNHSPTMYADYRFATI 203
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH1_BURVG (Malate dehydrogenase 1 OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=mdh1 PE=3 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 2.133e-49 Identity = 97/202 (48.02%), Postives = 137/202 (67.82%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 683 M+K RV VTGAAGQI Y+L+ IARG +LG DQPVIL +L++P A +AL GV MEL D AFPL++ V + D A + A++VG PR +GMER+D+++ N +I+++Q AL + A KVLVV NPANTNA + + +AP +PA IT + RLDHNRA+ +++ + V V V + +WGNHS + +PD HA ++ Sbjct: 1 MSKPARRVAVTGAAGQIAYSLLFRIARGDLLGDDQPVILQLLELPHALDALRGVVMELEDCAFPLLQSVEISDDPRVAFRDADYAMLVGSRPRGKGMERRDLLAANAAIFRSQGEALNEVANRQVKVLVVGNPANTNAWVARHYAPDLPADAITAMIRLDHNRAVSKLAARCGVTVDAVSRMAVWGNHSPTMFPDYRHALID 202 The following BLAST results are available for this feature:
BLAST of CF835909 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 212
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835909 ID=CF835909; Name=CF835909; organism=Citrus sinensis; type=EST; length=719bpback to top |