CF835909
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_LEPBA (Malate dehydrogenase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=mdh PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 3.188e-45 Identity = 98/197 (49.75%), Postives = 128/197 (64.97%), Query Frame = 3 Query: 93 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 683 V+V VTGAAGQIGYAL+ IA G M G D V L +L++ A A GV MEL D AFPL++ V +++ EA +N A++VG PRK GMER D++ N I+ Q A+E++AA + +VLVV NP NTNALI A +P+ +T LD NRA Q+++K V V DV NV IWGNHS++QYPD +A VN Sbjct: 5 VKVAVTGAAGQIGYALLFRIASGQMFGPDTAVELQLLELEQAIPAAKGVIMELDDCAFPLLEKVSVSSNIDEAFRDINWALLVGSVPRKAGMERGDLLKINGGIFTTQGKAIEKNAASDVRVLVVGNPCNTNALIAMNNAKGVPSDRWFAMTGLDENRAKTQLAQKAGVLVKDVSNVAIWGNHSATQYPDFFNAKVN 201
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_CORJK (Malate dehydrogenase OS=Corynebacterium jeikeium (strain K411) GN=mdh PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.211e-44 Identity = 95/208 (45.67%), Postives = 133/208 (63.94%), Query Frame = 3 Query: 93 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVREL 716 V V VTGA GQIGY+L+ IA+G + G D+ V L +L+ +A GV +EL D AFPL+ V TT+ E N +VG PR++G ER D+++ N I+ Q A+ ++AA + +V+VV NPANTNA I+ A + + +T LTRLDHNR L Q+++KL V V D+KN+ +WGNHS+SQ+PDV T+N GEK +L Sbjct: 9 VTVTVTGAGGQIGYSLLFRIAKGEVFG-DRVVNLRLLETEQGVQAARGVALELADCAFPLLGEVSITTELSEGFKDANAVFLVGAKPRQKGEERADLLAANGKIFGPQGKAIAEYAADDVRVIVVGNPANTNAAIVAAHAEGLDPRRVTALTRLDHNRGLAQVADKLGVAVRDLKNMTVWGNHSASQFPDVAELTLN---GEKVADKL 212
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_LEPBL (Malate dehydrogenase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=mdh PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 7.851e-44 Identity = 97/209 (46.41%), Postives = 133/209 (63.64%), Query Frame = 3 Query: 93 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELV 719 V+V VTGAAGQIGY+L+ IA G M GTD V + ML++ A A GV MEL D AFPL++ V ++D A +N A++VG PRK GMER D++ N I+ Q A+E++AA + +VLVV NP NTN LI A IP+ +T+LD NRA Q++ K V V +V ++ IWGNHSS+QYPD +A ++ KPV +++ Sbjct: 5 VKVAVTGAAGQIGYSLLFRIASGQMFGTDTAVEIQMLELEAAIPAAKGVIMELEDCAFPLLQKVTVSSDLDIAFKDINWALLVGSVPRKAGMERGDLLKINGGIFINQGKAIEKNAASDVRVLVVGNPCNTNCLIAMNNAKGIPSDRWFAMTKLDENRAKSQLASKAGVPVKEVTHLGIWGNHSSTQYPDFYNAKIS----GKPVTDVI 209
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_LEPBJ (Malate dehydrogenase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=mdh PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 7.851e-44 Identity = 97/209 (46.41%), Postives = 133/209 (63.64%), Query Frame = 3 Query: 93 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELV 719 V+V VTGAAGQIGY+L+ IA G M GTD V + ML++ A A GV MEL D AFPL++ V ++D A +N A++VG PRK GMER D++ N I+ Q A+E++AA + +VLVV NP NTN LI A IP+ +T+LD NRA Q++ K V V +V ++ IWGNHSS+QYPD +A ++ KPV +++ Sbjct: 5 VKVAVTGAAGQIGYSLLFRIASGQMFGTDTAVEIQMLELEAAIPAAKGVIMELEDCAFPLLQKVTVSSDLDIAFKDINWALLVGSVPRKAGMERGDLLKINGGIFINQGKAIEKNAASDVRVLVVGNPCNTNCLIAMNNAKGIPSDRWFAMTKLDENRAKSQLASKAGVPVKEVTHLGIWGNHSSTQYPDFYNAKIS----GKPVTDVI 209
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_LEPIN (Malate dehydrogenase OS=Leptospira interrogans GN=mdh PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.308e-42 Identity = 94/209 (44.98%), Postives = 128/209 (61.24%), Query Frame = 3 Query: 93 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELV 719 V+V VTGAAGQIGY+L+ IA G M G D V + ML++ A A GV MEL D AFPL++ V ++D A +N A++VG PRK GMER D++ N I+ Q A+E++AA + ++LVV NP NTN LI A I +T+LD NRA Q++ K V V +V ++ IWGNHS++QYPD NT KPV +++ Sbjct: 5 VKVAVTGAAGQIGYSLLFRIASGQMFGADTAVEIQMLELEAAIPAAKGVIMELEDCAFPLLQKVTVSSDLDTAFKEINWALLVGSVPRKAGMERGDLLKINGGIFVNQGKAIEKNAASDVRILVVGNPCNTNCLIAMNNAKGISQDRWFAMTKLDENRAKSQLASKAGVPVKEVTHLGIWGNHSATQYPDF----YNTKISGKPVTDVI 209
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_LEPIC (Malate dehydrogenase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=mdh PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.308e-42 Identity = 94/209 (44.98%), Postives = 128/209 (61.24%), Query Frame = 3 Query: 93 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELV 719 V+V VTGAAGQIGY+L+ IA G M G D V + ML++ A A GV MEL D AFPL++ V ++D A +N A++VG PRK GMER D++ N I+ Q A+E++AA + ++LVV NP NTN LI A I +T+LD NRA Q++ K V V +V ++ IWGNHS++QYPD NT KPV +++ Sbjct: 5 VKVAVTGAAGQIGYSLLFRIASGQMFGADTAVEIQMLELEAAIPAAKGVIMELEDCAFPLLQKVTVSSDLDTAFKEINWALLVGSVPRKAGMERGDLLKINGGIFVNQGKAIEKNAASDVRILVVGNPCNTNCLIAMNNAKGISQDRWFAMTKLDENRAKSQLASKAGVPVKEVTHLGIWGNHSATQYPDF----YNTKISGKPVTDVI 209
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDHP_SPIOL (Malate dehydrogenase [NADP], chloroplastic OS=Spinacia oleracea GN=MDH PE=1 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.138e-41 Identity = 94/212 (44.34%), Postives = 125/212 (58.96%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELV 719 K+ + + ++GAAG I L+ +A GV+ G DQP+ L +L + AL GV MEL D+ +PL++ V D E A+++G PR GMER D++ N IY Q AL A+PN KV+VV NP NTNALI + P+IPAKN LTRLD NRA Q++ K V V NV IWGNHS++Q PD VN G PV+E++ Sbjct: 89 KKMITIAISGAAGTISNHLLFKLASGVVFGPDQPIALKLLGSEKSFHALEGVAMELEDSLYPLLREVSIGIDPYEVFEDAEWALLIGAKPRGPGMERADLLDINGKIYAEQGKALNAVASPNVKVIVVGNPCNTNALICLKNPPNIPAKNFHSLTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDF----VNAQIGGVPVKEVI 296
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_PARUW (Malate dehydrogenase OS=Protochlamydia amoebophila (strain UWE25) GN=mdh PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.792e-41 Identity = 85/211 (40.28%), Postives = 127/211 (60.19%), Query Frame = 3 Query: 87 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELV 719 +P+++ ++G AGQI Y+L+ +A G + G +Q + L +L++P A AL GVKME+ D AFPL+ + +D +A ++ A+++G R GMER+D++ +N I+ Q AL A + K+ VV NP NTN LI APS+ +N +TRLD NRA +S+K V DV V IWGNHS++Q PD VN +KPV ++ Sbjct: 3 QPIKIAISGGAGQIAYSLLFRLASGELFGPNQLIELQVLEVPNALSALEGVKMEIEDCAFPLLSSIKICSDPYQAFEDIDYALLIGAKSRGPGMERRDLLQENSKIFVNQGQALNAVAKSSAKIFVVGNPCNTNCLIALNNAPSLKRENFYAMTRLDQNRATFFLSQKSQVSTKDVSCVTIWGNHSATQVPDF----VNAKISQKPVETII 209
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_CHLTR (Malate dehydrogenase OS=Chlamydia trachomatis GN=mdh PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.061e-40 Identity = 86/214 (40.19%), Postives = 121/214 (56.54%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELV 719 M + V V VTG GQI Y+ + +A G + G D + L + DIP AL+GV+MEL D AFPL++ V TT +A G++ A ++G PR GMER+D++ KN I+ Q AL A + K+ VV NP NTN I AP + KN + RLD NR +S + V +S V V++WGNHS+ Q PD A +N ++P+ E + Sbjct: 1 MVSQTVSVAVTGGTGQIAYSFLFSLAHGDVFGLDCGIDLRIYDIPGTERALSGVRMELDDGAFPLLQRVQVTTSLHDAFDGIDAAFLIGSVPRGPGMERRDLLKKNGEIFATQGKALNTTAKRDAKIFVVGNPVNTNCWIAMNHAPRLLRKNFHAMLRLDQNRMHSMLSHRAEVPLSAVSQVVVWGNHSAKQVPDFTQALIN----DRPIAETI 210
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_CHLTB (Malate dehydrogenase OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=mdh PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.087e-40 Identity = 86/214 (40.19%), Postives = 120/214 (56.07%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELV 719 M + V V VTG GQI Y+ + +A G + G D + L + DIP AL+GV+MEL D AFPL++ V TT +A G++ A ++G PR GMER+D++ KN I Q AL A + K+ VV NP NTN I AP + KN + RLD NR +S + V +S V V++WGNHS+ Q PD A +N ++P+ E + Sbjct: 1 MVSQTVSVAVTGGTGQIAYSFLFSLAHGDVFGLDCGIDLRIYDIPGTERALSGVRMELDDGAFPLLQRVQVTTSLHDAFDGIDAAFLIGSVPRGPGMERRDLLKKNGEIVATQGKALNTTAKRDAKIFVVGNPVNTNCWIAMNHAPRLLRKNFHAMLRLDQNRMHSMLSHRAEVPLSAVSQVVVWGNHSAKQVPDFTQALIN----DRPIAETI 210 The following BLAST results are available for this feature:
BLAST of CF835909 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 212
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835909 ID=CF835909; Name=CF835909; organism=Citrus sinensis; type=EST; length=719bpback to top |